FFCP PHASE1:Mm9::chr9:58049358..58049425,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320563 | |EntrezGene=320563 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q9N7,Q5RKR3 | |UniProt=E9Q9N7,Q5RKR3 | ||
|association_with_transcript=96bp_to_ENSMUST00000163200,NM_001161535,NM_001161537,uc009pwl.1,uc012guf.1_5end | |association_with_transcript=96bp_to_ENSMUST00000163200,NM_001161535,NM_001161537,uc009pwl.1,uc012guf.1_5end | ||
|cluster_id=chr9:58049358..58049425,- | |||
|description=CAGE_peak_2_at_Islr2_5end | |description=CAGE_peak_2_at_Islr2_5end | ||
|id=chr9:58049358..58049425,- | |id=chr9:58049358..58049425,- | ||
|ontology_enrichment_celltype=CL:0000117!1.96e-10!23;CL:0000337!1.96e-10!23;CL:0000540!1.02e-08!33;CL:0000047!1.02e-08!33;CL:0000031!1.02e-08!33;CL:0000404!1.02e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.43e-11,23;CL:0000337,2.43e-11,23;CL:0000540,4.04e-08,33;CL:0000047,4.04e-08,33;CL:0000031,4.04e-08,33;CL:0000404,4.04e-08,33;CL:0002609,1.40e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!3.48e-21!49;UBERON:0002346!1.08e-19!71;UBERON:0003075!1.08e-19!71;UBERON:0007284!1.08e-19!71;UBERON:0000033!5.10e-18!63;UBERON:0002780!1.25e-17!39;UBERON:0001890!1.25e-17!39;UBERON:0006240!1.25e-17!39;UBERON:0003080!1.77e-17!40;UBERON:0001049!4.75e-16!52;UBERON:0005068!4.75e-16!52;UBERON:0006241!4.75e-16!52;UBERON:0007135!4.75e-16!52;UBERON:0004121!7.91e-16!102;UBERON:0000924!7.91e-16!102;UBERON:0006601!7.91e-16!102;UBERON:0001017!9.14e-16!73;UBERON:0005743!9.14e-16!73;UBERON:0000073!9.49e-16!75;UBERON:0001016!9.49e-16!75;UBERON:0002020!6.23e-15!34;UBERON:0000955!1.60e-14!50;UBERON:0006238!1.60e-14!50;UBERON:0002616!3.41e-14!49;UBERON:0002791!2.39e-13!29;UBERON:0003528!2.39e-13!29;UBERON:0001893!2.39e-13!29;UBERON:0000956!8.84e-11!21;UBERON:0001869!8.84e-11!21;UBERON:0000203!8.84e-11!21;UBERON:0000153!2.21e-09!94;UBERON:0007811!4.94e-09!86;UBERON:0002619!3.81e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,7.51e-23,49;UBERON:0002346,1.63e-20,64;UBERON:0003075,1.63e-20,64;UBERON:0007284,1.63e-20,64;UBERON:0002780,8.91e-20,39;UBERON:0001890,8.91e-20,39;UBERON:0006240,8.91e-20,39;UBERON:0003080,5.70e-19,40;UBERON:0002020,3.47e-17,34;UBERON:0000073,4.90e-17,54;UBERON:0010371,9.24e-17,73;UBERON:0001049,1.96e-16,52;UBERON:0005068,1.96e-16,52;UBERON:0006241,1.96e-16,52;UBERON:0007135,1.96e-16,52;UBERON:0000955,2.58e-15,47;UBERON:0006238,2.58e-15,47;UBERON:0003528,3.59e-15,29;UBERON:0002791,3.59e-15,29;UBERON:0001893,3.59e-15,29;UBERON:0001017,4.50e-15,73;UBERON:0002616,6.47e-15,46;UBERON:0001016,2.92e-14,75;UBERON:0004121,7.10e-14,95;UBERON:0000924,7.10e-14,95;UBERON:0006601,7.10e-14,95;UBERON:0000956,1.17e-13,21;UBERON:0001869,1.17e-13,21;UBERON:0000203,1.17e-13,21;UBERON:0010314,6.77e-12,92;UBERON:0002619,2.64e-10,17;UBERON:0002021,1.59e-07,10;UBERON:0000411,1.59e-07,10;UBERON:0001950,1.59e-07,10 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,24.8849246857305,25.9205579843296,17.1134478946668,0,0,0,0,0,0.599200221036809,0,24.9891965663431,29.0262767413135,23.5563956713548,1.99955689082663,1.32521124570968,68.7173383595892,81.085268481428,71.6990653555816,0,1.0214987046815,1.68967186581868,62.7778729595723,58.3691166183374,86.4716195124222,0,0.56276261003168,0.916789486660861,1.17851434189467,2.56269025438385,7.82877672466262,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0.520455980298408,2.74018930480927,0.922461989024234,1.3565037649736,1.41106448562846,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,1.83000241127451,53.4030996479674,3.99795936442236,6.90431734791892,0.83115217823824,4.38051410282946,0.203678727700633,0.248813941220186,0,0,1.69156575851515,12.644615743841,20.8872070574205,12.5084998803643,9.11689088627793,6.53379973452734,5.24729657534481,0.776110112217047,0.646703978798527,1.13463648100692,0.703804496655795,1.09597866213787,0.556094498451196,0,0.411564272815887,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,7.99101804543684,74.7087485873605,0,0,0,2.09013004674395,0.902072229254653,0.605050573870028,1.33426826306922,1.33157938278791,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0,0.456994050438915,0,0,0.387904974335251,0.140271639780637,0,0,0,0,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,1.56175497718655,0,0.716906393857656,0.891194696329576,0.566153061577665,0,0,0,2.24924921495265,0,0,0,0,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,8.10274923140896,15.6524007377133,12.6458850668639,14.896579625951,9.81028496811388,5.43011767986999,3.95804433848979,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,1.89801596148681,1.62655573701479,1.83609079397062,1.25452977608681,1.09181281873089,0.269728692769641,0.247960367176008,0,0,0,0,2.99033092087958,2.31641886639937,3.50012139019286,7.36210993823067,4.05494701177868,9.03650737572305,3.1249052362548,0,0,0,0,0,0.102710957164827,0,0.537080087002444,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,7.34177395402186,8.28585425712918,5.15605962095457,6.53042092906013,2.74033007908257,4.5323633843382,3.37511250115903,4.95353323546643,4.07828168085784,3.62432218226274,1.86817225651518,10.3746467084268,11.9513524027894,3.64660075602441,6.49800804146745,4.96377472815038,3.77819437262746,5.76898160268904,4.81378814387723,3.28506375292937,4.81610669791456,2.64076877940507,3.55837728385553,4.03358460150676,3.84817642002609,2.85776214769844,3.1288768005111,5.40145817298374,4.53294490883637,4.56316652416632,1.37147700954166,2.48466128623072,5.00715998889374,5.52316383202848,4.42314087952054,4.23073039458383,3.10977553883713,1.8414879800649,3.66671107383827,1.68342681497322,3.79632057997357,3.74317033027141,6.13846564754534,4.02835787083512,5.01557188550968,15.9878769880285,3.27504251823572,2.79332370262788,0.57386499620653,0,0 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|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,24.8849246857305,25.9205579843296,17.1134478946668,0,0,0,0,0,0.599200221036809,0,24.9891965663431,29.0262767413135,23.5563956713548,1.99955689082663,1.32521124570968,68.7173383595892,81.085268481428,71.6990653555816,0,1.0214987046815,1.68967186581868,62.7778729595723,58.3691166183374,86.4716195124222,0,0.56276261003168,0.916789486660861,1.17851434189467,2.56269025438385,7.82877672466262,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0.520455980298408,2.74018930480927,0.922461989024234,1.3565037649736,1.41106448562846,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,1.83000241127451,53.4030996479674,3.99795936442236,6.90431734791892,0.83115217823824,4.38051410282946,0.203678727700633,0.248813941220186,0,0,1.69156575851515,12.644615743841,20.8872070574205,12.5084998803643,9.11689088627793,6.53379973452734,5.24729657534481,0.776110112217047,0.646703978798527,1.13463648100692,0.703804496655795,1.09597866213787,0.556094498451196,0,0.411564272815887,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,7.99101804543684,74.7087485873605,0,0,0,2.09013004674395,0.902072229254653,0.605050573870028,1.33426826306922,1.33157938278791,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0,0.456994050438915,0,0,0.387904974335251,0.140271639780637,0,0,0,0,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89304931649754,1.56175497718655,0,0.716906393857656,0.891194696329576,0.566153061577665,0,0,0,2.24924921495265,0,0,0,0,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0,8.10274923140896,15.6524007377133,12.6458850668639,14.896579625951,9.81028496811388,5.43011767986999,3.95804433848979,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,1.89801596148681,1.62655573701479,1.83609079397062,1.25452977608681,1.09181281873089,0.269728692769641,0.247960367176008,0,0,0,0,2.99033092087958,2.31641886639937,3.50012139019286,7.36210993823067,4.05494701177868,9.03650737572305,3.1249052362548,0,0,0,0,0,0.102710957164827,0,0.537080087002444,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,7.34177395402186,8.28585425712918,5.15605962095457,6.53042092906013,2.74033007908257,4.5323633843382,3.37511250115903,4.95353323546643,4.07828168085784,3.62432218226274,1.86817225651518,10.3746467084268,11.9513524027894,3.64660075602441,6.49800804146745,4.96377472815038,3.77819437262746,5.76898160268904,4.81378814387723,3.28506375292937,4.81610669791456,2.64076877940507,3.55837728385553,4.03358460150676,3.84817642002609,2.85776214769844,3.1288768005111,5.40145817298374,4.53294490883637,4.56316652416632,1.37147700954166,2.48466128623072,5.00715998889374,5.52316383202848,4.42314087952054,4.23073039458383,3.10977553883713,1.8414879800649,3.66671107383827,1.68342681497322,3.79632057997357,3.74317033027141,6.13846564754534,4.02835787083512,5.01557188550968,15.9878769880285,3.27504251823572,2.79332370262788,0.57386499620653,0,0 | ||
|short_description=p2@Islr2 | |short_description=p2@Islr2 | ||
}} | }} |
Latest revision as of 22:03, 26 September 2015
Short description: | p2@Islr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Islr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 96bp_to_ENSMUST00000163200, NM_001161535, NM_001161537, uc009pwl.1, uc012guf.1_5end |
EntrezGene: | Islr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.43e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.43e-11 | 23 |
neuron | 4.04e-08 | 33 |
neuronal stem cell | 4.04e-08 | 33 |
neuroblast | 4.04e-08 | 33 |
electrically signaling cell | 4.04e-08 | 33 |
neuron of cerebral cortex | 1.40e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 7.51e-23 | 49 |
neurectoderm | 1.63e-20 | 64 |
neural plate | 1.63e-20 | 64 |
presumptive neural plate | 1.63e-20 | 64 |
regional part of forebrain | 8.91e-20 | 39 |
forebrain | 8.91e-20 | 39 |
future forebrain | 8.91e-20 | 39 |
anterior neural tube | 5.70e-19 | 40 |
gray matter | 3.47e-17 | 34 |
regional part of nervous system | 4.90e-17 | 54 |
ecto-epithelium | 9.24e-17 | 73 |
neural tube | 1.96e-16 | 52 |
neural rod | 1.96e-16 | 52 |
future spinal cord | 1.96e-16 | 52 |
neural keel | 1.96e-16 | 52 |
brain | 2.58e-15 | 47 |
future brain | 2.58e-15 | 47 |
brain grey matter | 3.59e-15 | 29 |
regional part of telencephalon | 3.59e-15 | 29 |
telencephalon | 3.59e-15 | 29 |
central nervous system | 4.50e-15 | 73 |
regional part of brain | 6.47e-15 | 46 |
nervous system | 2.92e-14 | 75 |
ectoderm-derived structure | 7.10e-14 | 95 |
ectoderm | 7.10e-14 | 95 |
presumptive ectoderm | 7.10e-14 | 95 |
cerebral cortex | 1.17e-13 | 21 |
cerebral hemisphere | 1.17e-13 | 21 |
pallium | 1.17e-13 | 21 |
structure with developmental contribution from neural crest | 6.77e-12 | 92 |
regional part of cerebral cortex | 2.64e-10 | 17 |
occipital lobe | 1.59e-07 | 10 |
visual cortex | 1.59e-07 | 10 |
neocortex | 1.59e-07 | 10 |