FFCP PHASE1:Mm9::chr4:32744159..32744169,+: Difference between revisions
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{{FFCP|EntrezGene=100019|HGNC=|UniProt=|association_with_transcript=1bp_to_ENSMUST00000151626_5end|description=CAGE_peak_2_at_Mdn1_5end|id=chr4:32744159..32744169,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000838,7.73e-11,12;CL:0000791,3.31e-10,9;CL:0000789,3.31e-10,9;CL:0002420,3.31e-10,9;CL:0002419,3.31e-10,9;CL:0000790,3.31e-10,9;CL:0000542,5.80e-10,13;CL:0000051,5.80e-10,13;CL:0000084,2.61e-08,11;CL:0000827,2.61e-08,11;CL:0000624,8.12e-08,8;CL:0000738,1.73e-07,17;CL:0002087,1.73e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!5.78e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.72e-20,14;UBERON:0003135,4.93e-19,15;UBERON:0003101,9.31e-18,16;UBERON:0000079,9.31e-18,16;UBERON:0004176,1.24e-16,17;UBERON:0009196,1.24e-16,17;UBERON:0009117,1.24e-16,17;UBERON:0000991,1.25e-15,18;UBERON:0005564,1.25e-15,18;UBERON:0003133,2.26e-11,24;UBERON:0005156,2.17e-10,26;UBERON:0000990,2.17e-10,26;UBERON:0002323,6.95e-07,37;UBERON:0004458,6.95e-07,37|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0.233612640595526,0.516493293766305,1.40788722151667,4.68129052643987,0.856089841127525,1.19658238493005,0.342401459862411,0.34968160967599,0,0,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.510259740906419,0,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0,0,0,0,2.01339127269284,1.45072428402269,1.00828139742739,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0,0.571301968807607,0,0.244981598429908,0.383381884072945,1.83843757322004,1.10115880999389,0.383062014255563,0.153606533256243,0.395658863190582,1.28082701043374,2.08365348222704,0.279182999001381,0,0.45839474333043,0.294628585473668,0.854230084794618,0.745597783301202,0.454357159999104,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0,0.340860645156116,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0.776813650941515,0,0.173485326766136,0.608930956624282,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0.718890747035522,1.19980546198682,0.635351135365324,0.149790639404823,0.457500602818626,0.376963056338593,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.650602214813519,0.459804208866946,0,0.30140963567143,0.476255494059295,0.384341160854549,0.0937017245597288,0,0.215567992932842,0.756424320671277,0.351902248327898,0.43839146485515,0,0.348252166522167,0,0.398068533636986,0,1.02939162845886,0.568326998791185,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.658239399653922,0.164167464079095,0,0,0,0,0.420579897128254,1.3377599609307,0,0,0.853153002140936,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.140271639780637,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0.977789858652155,0.169745085775188,0.704070744865506,0,0,0.390267295715598,0,0,0.478364305972461,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0.163934945376675,0,0,0,0.430846795465598,0.716906393857656,0.445597348164788,0.849229592366497,0,0.584511715822624,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0.709360934569094,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0,0,0.322928853391811,0.180938774784468,0,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,2.37969801991397,0.979660166265606,1.52019971184866,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0,0,0,0,0.129614973291793,0,1.69107881605257,1.19613236835183,0.827292452285488,1.94451188344048,1.16243841129958,0.506868376472335,1.05621514781179,1.5624526181274,8.17902886520545,2.89900944991207,1.15212002503146,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.360586348559907,0.147689527174577,0.302899349844443,0.0762068066549998,0.302478555410522,0.194915761479505,0.384847366561318,0.233753804363138,0,0.221985953374065,0.62799699626633,0.335769232728157,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0.93408612825759,0.399024873401031,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0.505394423527595,0.760437899670719,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.463537303779422,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0.436039249896986,0.376437521661322,0.0846146078916765,0.365855945745545,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0,0,0|short_description=p2@Mdn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100019 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENSMUST00000151626_5end | |||
|cluster_id=chr4:32744159..32744169,+ | |||
|description=CAGE_peak_2_at_Mdn1_5end | |||
|id=chr4:32744159..32744169,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.73e-11,12;CL:0000791,3.31e-10,9;CL:0000789,3.31e-10,9;CL:0002420,3.31e-10,9;CL:0002419,3.31e-10,9;CL:0000790,3.31e-10,9;CL:0000542,5.80e-10,13;CL:0000051,5.80e-10,13;CL:0000084,2.61e-08,11;CL:0000827,2.61e-08,11;CL:0000624,8.12e-08,8;CL:0000738,1.73e-07,17;CL:0002087,1.73e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!5.78e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.72e-20,14;UBERON:0003135,4.93e-19,15;UBERON:0003101,9.31e-18,16;UBERON:0000079,9.31e-18,16;UBERON:0004176,1.24e-16,17;UBERON:0009196,1.24e-16,17;UBERON:0009117,1.24e-16,17;UBERON:0000991,1.25e-15,18;UBERON:0005564,1.25e-15,18;UBERON:0003133,2.26e-11,24;UBERON:0005156,2.17e-10,26;UBERON:0000990,2.17e-10,26;UBERON:0002323,6.95e-07,37;UBERON:0004458,6.95e-07,37 | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0.233612640595526,0.516493293766305,1.40788722151667,4.68129052643987,0.856089841127525,1.19658238493005,0.342401459862411,0.34968160967599,0,0,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.510259740906419,0,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0,0,0,0,2.01339127269284,1.45072428402269,1.00828139742739,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0,0.571301968807607,0,0.244981598429908,0.383381884072945,1.83843757322004,1.10115880999389,0.383062014255563,0.153606533256243,0.395658863190582,1.28082701043374,2.08365348222704,0.279182999001381,0,0.45839474333043,0.294628585473668,0.854230084794618,0.745597783301202,0.454357159999104,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0,0.340860645156116,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0.776813650941515,0,0.173485326766136,0.608930956624282,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0.718890747035522,1.19980546198682,0.635351135365324,0.149790639404823,0.457500602818626,0.376963056338593,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.650602214813519,0.459804208866946,0,0.30140963567143,0.476255494059295,0.384341160854549,0.0937017245597288,0,0.215567992932842,0.756424320671277,0.351902248327898,0.43839146485515,0,0.348252166522167,0,0.398068533636986,0,1.02939162845886,0.568326998791185,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.233530684734339,0.658239399653922,0.164167464079095,0,0,0,0,0.420579897128254,1.3377599609307,0,0,0.853153002140936,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.581857461502877,0.140271639780637,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0.977789858652155,0.169745085775188,0.704070744865506,0,0,0.390267295715598,0,0,0.478364305972461,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0.163934945376675,0,0,0,0.430846795465598,0.716906393857656,0.445597348164788,0.849229592366497,0,0.584511715822624,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0,0.709360934569094,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0,0,0.322928853391811,0.180938774784468,0,0.164140899745061,0,0.18542530201051,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,2.37969801991397,0.979660166265606,1.52019971184866,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0,0,0,0,0.129614973291793,0,1.69107881605257,1.19613236835183,0.827292452285488,1.94451188344048,1.16243841129958,0.506868376472335,1.05621514781179,1.5624526181274,8.17902886520545,2.89900944991207,1.15212002503146,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.360586348559907,0.147689527174577,0.302899349844443,0.0762068066549998,0.302478555410522,0.194915761479505,0.384847366561318,0.233753804363138,0,0.221985953374065,0.62799699626633,0.335769232728157,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0.93408612825759,0.399024873401031,0.682934423016537,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0.505394423527595,0.760437899670719,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.463537303779422,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0.436039249896986,0.376437521661322,0.0846146078916765,0.365855945745545,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0,0,0 | |||
|short_description=p2@Mdn1 | |||
}} |
Latest revision as of 21:57, 26 September 2015
Short description: | p2@Mdn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mdn1_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENSMUST00000151626_5end |
EntrezGene: | Mdn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.73e-11 | 12 |
mature alpha-beta T cell | 3.31e-10 | 9 |
alpha-beta T cell | 3.31e-10 | 9 |
immature T cell | 3.31e-10 | 9 |
mature T cell | 3.31e-10 | 9 |
immature alpha-beta T cell | 3.31e-10 | 9 |
lymphocyte | 5.80e-10 | 13 |
common lymphoid progenitor | 5.80e-10 | 13 |
T cell | 2.61e-08 | 11 |
pro-T cell | 2.61e-08 | 11 |
CD4-positive, alpha-beta T cell | 8.12e-08 | 8 |
leukocyte | 1.73e-07 | 17 |
nongranular leukocyte | 1.73e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
testis | 1.72e-20 | 14 |
male reproductive organ | 4.93e-19 | 15 |
male organism | 9.31e-18 | 16 |
male reproductive system | 9.31e-18 | 16 |
external genitalia | 1.24e-16 | 17 |
indifferent external genitalia | 1.24e-16 | 17 |
indifferent gonad | 1.24e-16 | 17 |
gonad | 1.25e-15 | 18 |
gonad primordium | 1.25e-15 | 18 |
reproductive organ | 2.26e-11 | 24 |
reproductive structure | 2.17e-10 | 26 |
reproductive system | 2.17e-10 | 26 |
body cavity | 6.95e-07 | 37 |
body cavity or lining | 6.95e-07 | 37 |