FFCP PHASE1:Mm9::chr1:181890905..181890910,+: Difference between revisions
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{{FFCP|EntrezGene=226751|HGNC=|UniProt=|association_with_transcript=14bp_to_ENSMUST00000134959_5end|description=CAGE_peak_2_at_Cdc42bpa_5end|id=chr1:181890905..181890910,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.78e-13!63;UBERON:0004111!8.66e-13!122;UBERON:0000025!2.24e-12!114;UBERON:0000955!5.03e-12!50;UBERON:0006238!5.03e-12!50;UBERON:0001049!7.25e-12!52;UBERON:0005068!7.25e-12!52;UBERON:0006241!7.25e-12!52;UBERON:0007135!7.25e-12!52;UBERON:0002616!1.90e-11!49;UBERON:0002346!2.00e-11!71;UBERON:0003075!2.00e-11!71;UBERON:0007284!2.00e-11!71;UBERON:0004121!6.99e-11!102;UBERON:0000924!6.99e-11!102;UBERON:0006601!6.99e-11!102;UBERON:0003056!1.69e-10!49;UBERON:0001017!9.59e-10!73;UBERON:0005743!9.59e-10!73;UBERON:0003080!1.04e-09!40;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0002780!3.79e-09!39;UBERON:0001890!3.79e-09!39;UBERON:0006240!3.79e-09!39;UBERON:0002020!5.56e-09!34;UBERON:0002791!5.19e-08!29;UBERON:0003528!5.19e-08!29;UBERON:0001893!5.19e-08!29;UBERON:0000475!9.04e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.09e-12,73;UBERON:0000073,1.36e-12,54;UBERON:0004111,2.03e-12,122;UBERON:0010314,2.39e-12,92;UBERON:0002346,4.90e-12,64;UBERON:0003075,4.90e-12,64;UBERON:0007284,4.90e-12,64;UBERON:0000025,5.28e-12,114;UBERON:0001049,6.27e-12,52;UBERON:0005068,6.27e-12,52;UBERON:0006241,6.27e-12,52;UBERON:0007135,6.27e-12,52;UBERON:0004121,3.22e-11,95;UBERON:0000924,3.22e-11,95;UBERON:0006601,3.22e-11,95;UBERON:0000955,5.97e-11,47;UBERON:0006238,5.97e-11,47;UBERON:0003056,1.50e-10,49;UBERON:0002616,2.19e-10,46;UBERON:0001017,7.24e-10,73;UBERON:0003080,9.31e-10,40;UBERON:0001016,1.07e-09,75;UBERON:0002780,3.43e-09,39;UBERON:0001890,3.43e-09,39;UBERON:0006240,3.43e-09,39;UBERON:0002020,5.04e-09,34;UBERON:0003528,4.76e-08,29;UBERON:0002791,4.76e-08,29;UBERON:0001893,4.76e-08,29|phase1_expression=4.32401887182944,1.39590163055744,0.909998478779072,0.30246421130683,0,0.503637815735669,1.16806320297763,0.129123323441576,0.422366166455,0,0,0.0797721589953364,0,0.0874204024189974,2.6648780945253,2.02475267389826,4.89693314689703,0.630924330716475,0.411343300817216,0,6.20816018102809,0.297872853602656,0,1.59992422793407,1.14704640533585,0.57423196411502,2.15380998079537,0.430942465371778,1.71021077510736,0.756090389279792,1.55211357458713,0.635030673459631,1.23012957516914,15.8481681015439,0.577703239502549,0.997407872150954,0.612508068787107,0,0,0,0,0.683045484958446,0.485510353031154,8.56098362233926,10.239070053171,4.03802854755699,0,0.65407546914134,1.31811709640683,1.94429899074283,1.39986421625363,0,0,0,0,4.3734104126111,3.43840127926508,3.6097046459421,4.85559506063035,4.23192783417626,1.90149421051854,0.338844532069132,0,0,0,0,1.19840044207362,1.53687322128622,3.00699875694585,5.26523159493594,3.99617426567626,3.42781181284564,2.65042249141936,5.51208596467293,2.87536413054709,1.83843757322004,4.40463523997555,10.0872997087298,8.90917892886212,3.56092976871523,4.20843160571084,4.68822033501084,8.37548997004143,14.069065250792,10.0846843532695,6.77645746589436,8.39992916714707,10.0655700745662,1.74170244666323,4.53429360640713,4.63783181922684,1.72084775396277,0.679971333707751,2.69851595818909,0.649776417447669,0.896053774194671,1.82577746171277,3.74946709671727,7.27400812888033,3.88673531961374,5.21120653173718,0,0,0,4.32982082022428,2.28023878927589,3.53867111510348,2.96878087269556,1.29468941823586,2.52351636410202,2.77576522825817,2.43572382649713,3.45923245884088,4.82312449768392,4.58595957829249,2.01066546127481,2.96633961281249,3.61498392299779,1.76922110389975,2.75003644910596,3.5334642953663,1.45462575940567,3.72783522436244,16.1029438356351,11.51956887474,1.53274233125155,0.479260498023681,0.599902730993408,0.381210681219194,13.481157546434,16.9275223042892,5.6544458450789,10.9509321721134,12.0186264945255,18.4931359658008,13.4660248346239,4.9901288286655,6.59356944233493,4.80173241023982,7.36546495602659,5.33493816147085,2.06911893990126,1.44049703844279,5.87748789559289,3.06164246180975,6.02134485338794,3.65436725782942,8.79591460512653,1.29340795759705,1.13463648100692,1.75951124163949,2.41115305670332,4.72680323683516,2.089512999133,5.96768195583036,4.97585667046233,1.40442637462647,0,0.284163499395593,2.48550927042602,4.69052119962192,3.6012412292203,2.60419209143731,5.90292695242211,5.39934895105824,2.55787339225449,4.56064782379353,2.45207218971056,1.97471819896177,3.94001913789829,3.89130285820108,4.5321996101853,3.07370161407471,3.35516046900929,11.1453672738987,4.21908910755066,0.330418782983798,1.58670339998127,3.41261200856374,4.41249676534833,1.67527699718721,0.80673409849337,3.11329261382818,1.14135375667535,0.474529061544512,3.45867804920423,6.53471542880701,6.76452004939913,4.48417400373976,3.59527763461689,5.61958929674205,2.19055400579804,0.758671603812327,5.02693455482807,2.25415471346161,2.8511185898344,6.0125271021964,4.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226751 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENSMUST00000134959_5end | |||
|cluster_id=chr1:181890905..181890910,+ | |||
|description=CAGE_peak_2_at_Cdc42bpa_5end | |||
|id=chr1:181890905..181890910,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.78e-13!63;UBERON:0004111!8.66e-13!122;UBERON:0000025!2.24e-12!114;UBERON:0000955!5.03e-12!50;UBERON:0006238!5.03e-12!50;UBERON:0001049!7.25e-12!52;UBERON:0005068!7.25e-12!52;UBERON:0006241!7.25e-12!52;UBERON:0007135!7.25e-12!52;UBERON:0002616!1.90e-11!49;UBERON:0002346!2.00e-11!71;UBERON:0003075!2.00e-11!71;UBERON:0007284!2.00e-11!71;UBERON:0004121!6.99e-11!102;UBERON:0000924!6.99e-11!102;UBERON:0006601!6.99e-11!102;UBERON:0003056!1.69e-10!49;UBERON:0001017!9.59e-10!73;UBERON:0005743!9.59e-10!73;UBERON:0003080!1.04e-09!40;UBERON:0000073!1.41e-09!75;UBERON:0001016!1.41e-09!75;UBERON:0002780!3.79e-09!39;UBERON:0001890!3.79e-09!39;UBERON:0006240!3.79e-09!39;UBERON:0002020!5.56e-09!34;UBERON:0002791!5.19e-08!29;UBERON:0003528!5.19e-08!29;UBERON:0001893!5.19e-08!29;UBERON:0000475!9.04e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.09e-12,73;UBERON:0000073,1.36e-12,54;UBERON:0004111,2.03e-12,122;UBERON:0010314,2.39e-12,92;UBERON:0002346,4.90e-12,64;UBERON:0003075,4.90e-12,64;UBERON:0007284,4.90e-12,64;UBERON:0000025,5.28e-12,114;UBERON:0001049,6.27e-12,52;UBERON:0005068,6.27e-12,52;UBERON:0006241,6.27e-12,52;UBERON:0007135,6.27e-12,52;UBERON:0004121,3.22e-11,95;UBERON:0000924,3.22e-11,95;UBERON:0006601,3.22e-11,95;UBERON:0000955,5.97e-11,47;UBERON:0006238,5.97e-11,47;UBERON:0003056,1.50e-10,49;UBERON:0002616,2.19e-10,46;UBERON:0001017,7.24e-10,73;UBERON:0003080,9.31e-10,40;UBERON:0001016,1.07e-09,75;UBERON:0002780,3.43e-09,39;UBERON:0001890,3.43e-09,39;UBERON:0006240,3.43e-09,39;UBERON:0002020,5.04e-09,34;UBERON:0003528,4.76e-08,29;UBERON:0002791,4.76e-08,29;UBERON:0001893,4.76e-08,29 | |||
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| |||
|short_description=p2@Cdc42bpa | |||
}} |
Latest revision as of 21:54, 26 September 2015
Short description: | p2@Cdc42bpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdc42bpa_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENSMUST00000134959_5end |
EntrezGene: | Cdc42bpa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.09e-12 | 73 |
regional part of nervous system | 1.36e-12 | 54 |
anatomical conduit | 2.03e-12 | 122 |
structure with developmental contribution from neural crest | 2.39e-12 | 92 |
neurectoderm | 4.90e-12 | 64 |
neural plate | 4.90e-12 | 64 |
presumptive neural plate | 4.90e-12 | 64 |
tube | 5.28e-12 | 114 |
neural tube | 6.27e-12 | 52 |
neural rod | 6.27e-12 | 52 |
future spinal cord | 6.27e-12 | 52 |
neural keel | 6.27e-12 | 52 |
ectoderm-derived structure | 3.22e-11 | 95 |
ectoderm | 3.22e-11 | 95 |
presumptive ectoderm | 3.22e-11 | 95 |
brain | 5.97e-11 | 47 |
future brain | 5.97e-11 | 47 |
pre-chordal neural plate | 1.50e-10 | 49 |
regional part of brain | 2.19e-10 | 46 |
central nervous system | 7.24e-10 | 73 |
anterior neural tube | 9.31e-10 | 40 |
nervous system | 1.07e-09 | 75 |
regional part of forebrain | 3.43e-09 | 39 |
forebrain | 3.43e-09 | 39 |
future forebrain | 3.43e-09 | 39 |
gray matter | 5.04e-09 | 34 |
brain grey matter | 4.76e-08 | 29 |
regional part of telencephalon | 4.76e-08 | 29 |
telencephalon | 4.76e-08 | 29 |