FFCP PHASE1:Mm9::chr1:181598333..181598399,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:181598333..181598399,+
|short_description=p2@Sccpdh
|description=CAGE_peak_2_at_Sccpdh_5end
|association_with_transcript=0bp_to_ENSMUST00000040538,ENSMUST0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=109232 | |EntrezGene=109232 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R127 | |UniProt=Q8R127 | ||
|association_with_transcript=0bp_to_ENSMUST00000040538,ENSMUST00000131039,ENSMUST00000134287,NM_178653,uc007dvp.1_5end | |||
|cluster_id=chr1:181598333..181598399,+ | |||
|description=CAGE_peak_2_at_Sccpdh_5end | |||
|id=chr1:181598333..181598399,+ | |||
|ontology_enrichment_celltype=CL:0000393!4.91e-07!39;CL:0000211!4.91e-07!39;CL:0000117!7.79e-07!23;CL:0000337!7.79e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.90e-07,39;CL:0000211,4.90e-07,39;CL:0000117,7.78e-07,23;CL:0000337,7.78e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.61e-10!75;UBERON:0001016!8.61e-10!75;UBERON:0004121!1.68e-09!102;UBERON:0000924!1.68e-09!102;UBERON:0006601!1.68e-09!102;UBERON:0001017!2.35e-09!73;UBERON:0005743!2.35e-09!73;UBERON:0001049!1.10e-08!52;UBERON:0005068!1.10e-08!52;UBERON:0006241!1.10e-08!52;UBERON:0007135!1.10e-08!52;UBERON:0000033!2.21e-08!63;UBERON:0002020!3.47e-08!34;UBERON:0002346!6.94e-08!71;UBERON:0003075!6.94e-08!71;UBERON:0007284!6.94e-08!71;UBERON:0000955!7.89e-08!50;UBERON:0006238!7.89e-08!50;UBERON:0002616!1.14e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.61e-11,92;UBERON:0004121,7.64e-10,95;UBERON:0000924,7.64e-10,95;UBERON:0006601,7.64e-10,95;UBERON:0001016,8.58e-10,75;UBERON:0000073,1.26e-09,54;UBERON:0001017,2.35e-09,73;UBERON:0010371,8.14e-09,73;UBERON:0001049,1.10e-08,52;UBERON:0005068,1.10e-08,52;UBERON:0006241,1.10e-08,52;UBERON:0007135,1.10e-08,52;UBERON:0002346,2.21e-08,64;UBERON:0003075,2.21e-08,64;UBERON:0007284,2.21e-08,64;UBERON:0002020,3.46e-08,34 | |||
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|phase1_expression=25.9441132309766,31.0588112799031,20.9299650119187,57.7706643596045,52.0931559144201,4.70061961353291,4.20502753071946,2.06597317506522,0.281577444303333,0.70219357896598,0.171217968225505,0.0797721589953364,0.171200729931206,0.0874204024189974,0.999329285446988,1.61980213911861,0,1.73504190947031,1.91960207048034,2.97072756258621,110.216104035786,2.08510997521859,2.35079810225042,9.43955294481099,9.1763712426868,25.8404383851759,11.630573896295,9.69620547086501,35.3443560188855,30.9997059604715,13.082100128663,0,0,0,3.46621943701529,4.15586613396231,4.08338712524738,1.25559489221072,0.7813353445238,0.523523743973798,0,0.683045484958446,0,24.0462922333353,26.5607559795128,23.6775310288569,5.47673941043627,5.66865406589161,12.5221124158649,11.2769341463084,9.65906309215001,8.62515386189829,1.67782606057736,0,0,10.0331180054019,12.0344044774278,11.3447860301037,16.1853168687678,17.4567023159771,17.1134478946668,5.08266798103698,7.11435836888911,2.6996991518442,4.94433181283487,0.7104801149461,4.79360176829448,6.53171119046643,15.5534418462716,18.765825428105,15.984697062705,32.5642122220336,33.5720182246453,14.3314235081496,12.2682202903343,8.27296907949019,48.450987639731,47.1166277534343,48.2324514424605,16.0901271030836,19.3038928001084,16.1483144872596,62.5369917763093,50.6486349028512,49.9650270230169,23.2756582524197,30.0404246486107,23.4863301739879,17.9471078199646,21.5378946304339,9.56552812715537,3.44169550792555,6.11974200336975,1.07940638327563,3.24888208723835,1.79210754838934,21.6284407002898,15.3387290320252,15.846946280775,17.3136391510067,32.8165168079666,15.3991772897181,22.9324715735981,14.2213340630666,15.154372870785,19.2553497761075,16.6823066854878,24.2069825004407,4.91981978929626,10.2425075954729,7.45986905094384,14.6143429589828,9.68585088475446,10.7013074792362,13.2875239063346,15.3313241422204,10.1349936771093,10.9895511259133,3.5384422077995,15.5296175949513,7.72945314611377,7.75800405016355,7.45567044872489,33.0842300623048,33.3020263833394,21.9693067479389,4.55297473122497,7.19883277192089,5.46401976414178,41.3422164757311,31.1100409916666,19.0994615211554,27.1165939499951,23.2701066170601,46.9600980704606,38.9379031362618,9.77657892963036,8.33526703087623,9.35074206204597,20.6233018768745,8.97831056442656,13.5642241615749,10.803727788321,9.0422890701429,10.6136938676071,11.2740073850668,14.2426621330788,21.4723797713383,10.1316956678436,8.50977360755187,9.14945845652534,11.1789823538063,12.7901734643775,13.5818344943645,10.0833246839892,9.15557627365069,4.21327912387941,5.40430604940902,5.39910648851626,8.69928244649108,9.85009451920604,12.604344302271,13.494449928357,13.3799677588235,17.2779166433864,19.0677834695334,20.9253253091703,16.2303825890366,26.4941358360704,24.4609521477852,31.0493540560627,34.7955970072291,28.3219648725455,22.4124719329821,22.0804445992334,23.153537785339,61.1274748520026,30.147364599644,8.10495352033889,7.43157349953403,5.92790322081629,7.26060688644033,13.787438718382,23.2075263857322,36.5387377389274,29.3164139408739,40.9676390344439,42.9745979608886,51.860447173686,19.7740269903929,25.2881518353392,16.3295844068581,10.6214024533726,9.13988100877831,7.88954149711563,9.36796108088446,11.2492442557223,10.9411879028897,11.3193401452421,11.0707610984702,15.2288766006134,13.8204823592417,1.1858105083486,1.66845105716094,2.94838492669805,2.47348323623339,1.62288097110802,3.37648023653384,4.58326533206556,3.45235364940973,2.2698931748505,3.84385978463314,8.62609239164127,4.09355042435354,6.24075346229121,4.79899868099512,4.84373016509163,2.41221760681684,7.39012760666419,12.506433176852,11.7334783038259,8.14776411720903,10.5610611729826,8.87783164441623,8.09348379012447,7.80534591431195,13.8718926813448,9.96591103419487,12.437471955284,7.37384916220821,8.63424909329478,8.82359257347221,1.50791283939272,4.35124547054968,10.3270497333998,10.4855963595798,78.9908902739936,71.4991288212439,9.67216177722385,17.1680230498974,13.2513452154828,15.2271110275689,10.9865932843727,11.709471099675,14.2591151412732,11.0399847007645,11.7395103485719,10.2289550268959,11.8586333383957,17.9939937196212,10.2196861349953,6.7664929393557,9.28455668315384,9.73323725537959,15.9294166007955,4.37005145078967,7.25576536715402,6.03536255218874,5.90603785761546,6.14870295887855,16.0225541764297,8.72480950746013,7.48644494607915,6.32073515871632,7.37930260024991,6.18813259489121,8.17055053809091,11.3438489239725,9.44318391614108,8.3591443662321,9.22169214939823,8.91844088010353,10.3665882979336,5.48036908406279,5.16277757740163,10.1679394014634,12.1290618930229,12.036696464728,8.39615018818709,9.71038091343309,14.8021706563889,21.6665987663481,28.2736411530955,91.6000991931918,2.22132145037209,9.08102219038179,6.48180845793991,1.88368457004691,0.683471138605126,3.43167259809784,3.0596117398894,5.17820373597535,5.66619892598138,6.68269432610579,8.85740782027179,7.5228202836934,7.12835249423888,6.27264888043406,10.2630404960703,11.1937407499401,9.25718704123762,12.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| ||
|short_description=p2@Sccpdh | |||
}} | }} |
Latest revision as of 21:51, 26 September 2015
Short description: | p2@Sccpdh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sccpdh_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000040538, ENSMUST00000131039, ENSMUST00000134287, NM_178653, uc007dvp.1_5end |
EntrezGene: | Sccpdh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.90e-07 | 39 |
electrically active cell | 4.90e-07 | 39 |
CNS neuron (sensu Vertebrata) | 7.78e-07 | 23 |
neuroblast (sensu Vertebrata) | 7.78e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.61e-11 | 92 |
ectoderm-derived structure | 7.64e-10 | 95 |
ectoderm | 7.64e-10 | 95 |
presumptive ectoderm | 7.64e-10 | 95 |
nervous system | 8.58e-10 | 75 |
regional part of nervous system | 1.26e-09 | 54 |
central nervous system | 2.35e-09 | 73 |
ecto-epithelium | 8.14e-09 | 73 |
neural tube | 1.10e-08 | 52 |
neural rod | 1.10e-08 | 52 |
future spinal cord | 1.10e-08 | 52 |
neural keel | 1.10e-08 | 52 |
neurectoderm | 2.21e-08 | 64 |
neural plate | 2.21e-08 | 64 |
presumptive neural plate | 2.21e-08 | 64 |
gray matter | 3.46e-08 | 34 |