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FFCP PHASE1:Mm9::chr11:109511848..109511868,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19084
|EntrezGene=19084
|HGNC=
|HGNC=
|MCL_coexpression_id=2631
|TSSclassifier=NA
|UniProt=A2AI69
|UniProt=A2AI69
|association_with_transcript=-20bp_to_ENSMUST00000106676_5end
|association_with_transcript=-20bp_to_ENSMUST00000106676_5end
|cluster_id=chr11:109511848..109511868,+
|description=CAGE_peak_2_at_Prkar1a_5end
|description=CAGE_peak_2_at_Prkar1a_5end
|id=chr11:109511848..109511868,+
|id=chr11:109511848..109511868,+
|ontology_enrichment_celltype=CL:0000393!1.57e-07!39;CL:0000211!1.57e-07!39;CL:0000055!2.65e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000393,1.57e-07,39;CL:0000211,1.57e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.46e-18!73;UBERON:0005743!3.46e-18!73;UBERON:0000073!1.39e-17!75;UBERON:0001016!1.39e-17!75;UBERON:0002346!5.60e-17!71;UBERON:0003075!5.60e-17!71;UBERON:0007284!5.60e-17!71;UBERON:0000955!1.18e-16!50;UBERON:0006238!1.18e-16!50;UBERON:0002616!3.17e-16!49;UBERON:0001049!5.29e-16!52;UBERON:0005068!5.29e-16!52;UBERON:0006241!5.29e-16!52;UBERON:0007135!5.29e-16!52;UBERON:0000033!3.87e-15!63;UBERON:0004121!4.52e-15!102;UBERON:0000924!4.52e-15!102;UBERON:0006601!4.52e-15!102;UBERON:0003080!2.95e-13!40;UBERON:0002780!7.96e-13!39;UBERON:0001890!7.96e-13!39;UBERON:0006240!7.96e-13!39;UBERON:0003056!3.39e-12!49;UBERON:0002020!4.76e-12!34;UBERON:0002791!2.15e-11!29;UBERON:0003528!2.15e-11!29;UBERON:0001893!2.15e-11!29;UBERON:0004535!3.10e-09!23;UBERON:0001009!3.10e-09!23;UBERON:0007811!1.46e-08!86;UBERON:0000025!5.02e-08!114;UBERON:0000956!6.87e-08!21;UBERON:0001869!6.87e-08!21;UBERON:0000203!6.87e-08!21;UBERON:0002021!6.94e-08!10;UBERON:0000411!6.94e-08!10;UBERON:0001950!6.94e-08!10;UBERON:0007100!8.57e-08!18;UBERON:0000948!8.57e-08!18;UBERON:0005498!8.57e-08!18;UBERON:0004140!8.57e-08!18;UBERON:0009881!8.57e-08!18;UBERON:0004141!8.57e-08!18;UBERON:0003084!8.57e-08!18;UBERON:0007005!8.57e-08!18;UBERON:0004139!8.57e-08!18;UBERON:0004291!8.57e-08!18;UBERON:0004111!9.67e-08!122;UBERON:0002619!1.13e-07!17;UBERON:0000153!7.76e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.43e-25,92;UBERON:0001017,3.45e-18,73;UBERON:0001016,1.38e-17,75;UBERON:0000073,4.63e-17,54;UBERON:0001049,5.27e-16,52;UBERON:0005068,5.27e-16,52;UBERON:0006241,5.27e-16,52;UBERON:0007135,5.27e-16,52;UBERON:0002346,2.54e-15,64;UBERON:0003075,2.54e-15,64;UBERON:0007284,2.54e-15,64;UBERON:0000955,2.93e-15,47;UBERON:0006238,2.93e-15,47;UBERON:0002616,7.69e-15,46;UBERON:0004121,2.35e-13,95;UBERON:0000924,2.35e-13,95;UBERON:0006601,2.35e-13,95;UBERON:0003080,2.95e-13,40;UBERON:0002780,7.94e-13,39;UBERON:0001890,7.94e-13,39;UBERON:0006240,7.94e-13,39;UBERON:0010371,2.33e-12,73;UBERON:0003056,3.38e-12,49;UBERON:0002020,4.75e-12,34;UBERON:0003528,2.15e-11,29;UBERON:0002791,2.15e-11,29;UBERON:0001893,2.15e-11,29;UBERON:0004535,3.10e-09,23;UBERON:0001009,3.10e-09,23;UBERON:0000025,4.74e-08,114;UBERON:0000956,6.86e-08,21;UBERON:0001869,6.86e-08,21;UBERON:0000203,6.86e-08,21;UBERON:0002021,6.93e-08,10;UBERON:0000411,6.93e-08,10;UBERON:0001950,6.93e-08,10;UBERON:0007100,8.56e-08,18;UBERON:0000948,8.56e-08,18;UBERON:0005498,8.56e-08,18;UBERON:0004140,8.56e-08,18;UBERON:0009881,8.56e-08,18;UBERON:0004141,8.56e-08,18;UBERON:0003084,8.56e-08,18;UBERON:0007005,8.56e-08,18;UBERON:0004139,8.56e-08,18;UBERON:0004291,8.56e-08,18;UBERON:0004111,9.19e-08,122;UBERON:0002619,1.13e-07,17
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0740036172,4.80397640241591,7.55240339754996,9.4224939526883,9.42321391142507,7.12882353104861,0.621339313086926,3.38215763210514,11.3632574993424,16.0494735743385,11.4726201122988,16.1449779347164,13.5164900392623,7.3935060346825,5.85919731797776,5.13810787685983,5.31485065817213,8.64090018773596,3.47612232690996,13.582589424441,12.1198929454496,8.70469513951227,6.26593434836185,7.15252877212554,4.80781798079875,3.83992770653901,5.14928894735553,3.81034033274999,3.52891647978942,2.82627854145282,2.69393156592922,3.85693777199178,37.1837829128947,1.10992976687032,0.807424709485281,2.01461539636894,12.9437028001568,20.2697073487277,8.79127796482872,5.78794623513478,9.02829787263654,74.5472432254528,62.1439069284689,67.0287750724094,54.3056056206053,81.5248198527064,82.3379348154774,73.5774525252668,92.7661678641894,91.5347666148093,75.0752452040139,5.18936737920883,9.57659696162474,11.6098851912811,20.9071776678733,18.2363451486345,19.1197248788015,31.5590353478294,23.4879965252339,22.7852638810189,21.9846574234504,25.6014092889142,29.2370829148418,26.313263599037,28.875343734596,33.1402655873889,30.0065025508336,29.0869658121587,36.0740242267128,35.0273015682811,31.500568908761,26.0580631812916,32.3005967209994,27.6585980338892,26.8890870769808,31.3384236783051,32.6612386461871,36.4026666016817,36.829759601298,30.420121501473,35.9131053860953,30.7264696941611,30.5363895364247,43.7877216191568,32.6916734902388,24.8849528165672,29.9772693525535,27.8378614050036,25.7845264857958,33.2841697799787,41.4711867944689,36.1713823567857
|phase1_expression=20.4990524294136,1.74487703819681,1.36499771816861,0.60492842261366,0.500895729946347,3.86122325397347,3.73780224952841,4.51931632045517,58.28653097079,62.2611640016503,14.8959632356189,7.17949430958028,2.9104124088305,4.19617931611188,0.333109761815663,1.21485160433896,0.699561878128147,2.36596624018678,2.4680598049033,0.84877930359606,18.0291775120268,18.6666988257664,13.5823890352246,1.75991665072747,2.2940928106717,0,1.29228598847722,2.15471232685889,0.760093677825496,3.02436155711917,2.43903561720835,2.54012269383853,3.69038872550742,0,0.866554859253824,0.831173226792462,1.02084678131185,7.53356935326434,6.2506827561904,13.6116173433188,22.3527965451785,11.6117732442936,12.1377588257788,55.7722903631807,56.5683276204891,37.8106309453064,17.2126095756569,15.9158364157726,31.8544964964984,28.3867652648454,24.2176509411877,14.3752564364972,11.7447824240415,18.1340535502836,46.0448504825176,33.7009861207091,21.7765414353455,62.3963231655705,30.7521020506589,26.9785399428737,19.0149421051854,32.8679196107058,16.8966011261116,6.74924787961049,5.93319817540185,7.8152812644071,17.9760066311043,18.8266969607562,16.3829587447395,17.9557897981149,17.4569717921647,26.2798905651499,25.8416192913388,17.7611658861683,16.2937300731002,6.43453150627015,36.3382407297983,47.4996897676898,48.2324514424605,41.0166354840903,49.2203522580964,39.068502791757,49.4153908232444,61.3411244934531,59.7441148807328,21.5078867395777,24.6303007782448,32.247104127777,8.48133365331661,10.0510174942025,45.5087247261634,6.0229671388697,1.3599426674155,0,1.29955283489534,0.448026887097336,12.0782201313307,41.5849987090461,47.540838842325,40.6340510686891,19.5772353489586,24.3820307087204,12.7402619853323,0,2.16491041011214,2.53359865475099,2.02209778005913,4.45317130904334,2.58937883647172,34.1416919849097,21.3386951922347,20.7036525252256,30.6718611350558,31.8024771566034,33.865547655083,23.24831939599,2.22475470960936,10.4111536982336,2.65383165584962,58.5595996809621,17.6673214768315,12.1218813283806,3.72783522436244,37.7687228144896,42.5176814831314,3.57639877292028,23.7233946521722,17.9970819298022,16.0108486112061,42.3907509515648,46.6650614874999,30.2826988592003,76.1350522442171,67.5088807352073,52.5703752735687,70.4127081714068,7.94347038032467,9.20611582514688,4.54900965180614,8.41767423545896,4.42409506073193,14.4838325793088,15.1252189036493,25.3184093964001,15.7844678031081,19.2170580427275,17.8970293909082,30.7857011179429,0.646703978798527,4.16033376369202,5.63043597324636,13.3709396780821,5.28289773528636,22.2881386574187,10.4948889568051,5.57295947091781,3.51106593656617,10.5512641917033,7.95657798307659,23.6123380690472,22.5145017581852,30.4304883869115,29.5930919481513,30.695220152595,30.8534225774757,44.1814495025775,43.9968378295375,62.3526928240685,64.8365808659113,122.468928203005,52.8568638238979,50.2927956743143,53.7897782463074,55.8298702043147,70.2368428204185,30.3568606518889,2.31293148088659,1.85115396664481,4.05247676016945,5.10920678092965,5.15469845288373,4.63872106633688,4.44756087689741,4.1849637744763,5.69434873853414,8.39964669092456,9.29940272560997,9.15199771389294,8.96834800747953,6.29173586057955,6.48414149624083,7.56736838366595,4.1726938209678,10.3966146474853,3.38123207019241,8.34970444165788,7.75809948670503,11.1515953625607,12.7105439619757,17.1227771656338,14.6008816892479,17.1522057851303,1.77871576252289,1.66845105716094,1.76903095601883,1.12431056192427,2.23146133527353,1.4470629585145,1.2731292589071,0.575392274901621,1.78348749452539,3.29473695825698,5.75072826109418,5.20997326735905,4.68056509671841,2.77836765741823,2.87035861635059,2.8946611281802,11.8242041706627,5.87423376488503,5.86673915191293,5.94107800213158,3.28566347603903,5.02518772325447,6.18913466303636,13.0739544064725,10.4039195110086,15.5025282754142,8.77001227616179,14.0922450655535,18.8226630233826,13.4523624480806,4.52373851817817,3.80733978673097,1.47529281905711,3.86311444826625,44.1514122466428,51.1042953542006,11.9672510124973,62.8652608738889,17.9839685067266,26.1593958678748,20.2497993868831,11.9484398976276,11.3627323782021,7.92614286208731,18.2164815753702,27.4720506436633,24.5078422326845,40.1651645527259,13.9101283504103,9.79360820169904,10.5876523579824,11.8778488540226,2.65490276679926,10.6823479908192,9.67435382287203,6.78978287121233,9.7449624650655,7.68587869859819,12.9214146584111,11.6330793432802,16.3988794056972,6.32073515871632,1.05418608574999,4.12542172992747,44.2571487479924,9.54323798365944,12.6771510107099,20.3620183280013,19.6847659342924,21.9393645650547,28.4669805641669,32.8822145043767,6.10146440965647,7.20229040936989,15.6575162619023,4.28704257647848,17.2766936564619,11.0975781867807,5.84924485615369,3.61109979439135,6.70405924248657,33.0057037578707,2.05045056957423,4.12773735926445,2.22233432843654,1.69531611304222,1.23024804948923,1.37266903923914,57.622687767917,62.2783962840278,58.5967888930757,7.63736494412091,4.27053591334533,5.28630614529807,5.83228840437727,5.22720740036172,4.80397640241591,7.55240339754996,9.4224939526883,9.42321391142507,7.12882353104861,0.621339313086926,3.38215763210514,11.3632574993424,16.0494735743385,11.4726201122988,16.1449779347164,13.5164900392623,7.3935060346825,5.85919731797776,5.13810787685983,5.31485065817213,8.64090018773596,3.47612232690996,13.582589424441,12.1198929454496,8.70469513951227,6.26593434836185,7.15252877212554,4.80781798079875,3.83992770653901,5.14928894735553,3.81034033274999,3.52891647978942,2.82627854145282,2.69393156592922,3.85693777199178,37.1837829128947,1.10992976687032,0.807424709485281,2.01461539636894,12.9437028001568,20.2697073487277,8.79127796482872,5.78794623513478,9.02829787263654,74.5472432254528,62.1439069284689,67.0287750724094,54.3056056206053,81.5248198527064,82.3379348154774,73.5774525252668,92.7661678641894,91.5347666148093,75.0752452040139,5.18936737920883,9.57659696162474,11.6098851912811,20.9071776678733,18.2363451486345,19.1197248788015,31.5590353478294,23.4879965252339,22.7852638810189,21.9846574234504,25.6014092889142,29.2370829148418,26.313263599037,28.875343734596,33.1402655873889,30.0065025508336,29.0869658121587,36.0740242267128,35.0273015682811,31.500568908761,26.0580631812916,32.3005967209994,27.6585980338892,26.8890870769808,31.3384236783051,32.6612386461871,36.4026666016817,36.829759601298,30.420121501473,35.9131053860953,30.7264696941611,30.5363895364247,43.7877216191568,32.6916734902388,24.8849528165672,29.9772693525535,27.8378614050036,25.7845264857958,33.2841697799787,41.4711867944689,36.1713823567857
|short_description=p2@Prkar1a
|short_description=p2@Prkar1a
}}
}}

Latest revision as of 21:43, 26 September 2015

Short description:p2@Prkar1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Prkar1a_5end
Coexpression cluster:MCL_coexpression_mm9:2631
Association with transcript: -20bp_to_ENSMUST00000106676_5end
EntrezGene:Prkar1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Prkar1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E758.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F262.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.18
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.58
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D855.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D956.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B337.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B831.85
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.13
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A146.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C133.70
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E121.78
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C562.40
Mouse Granule cells, donor1.CNhs12131.11713-123C330.75
Mouse Granule cells, donor2.CNhs12357.11731-123E326.98
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C632.87
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C817.98
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.84
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F347.50
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D748.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D441.02
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F449.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D839.07
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E449.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E561.34
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I659.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.51
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E132.25
Mouse Schwann, donor1.CNhs12507.11728-123D98.48
Mouse Schwann, donor2.CNhs12573.11746-123F910.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G345.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I741.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E347.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I840.63
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.45
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D734.14
adrenal gland, embryo E14.CNhs11038.406-44C521.34
adrenal gland, embryo E16.CNhs11004.1254-43D620.70
adrenal gland, embryo E17.CNhs11043.1263-45I130.67
adrenal gland, embryo E18.CNhs11026.1262-18F531.80
adrenal gland, neonate N00.CNhs11191.1311-23C133.87
adrenal gland, neonate N25.CNhs11223.1377-27I323.25
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H110.41
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F558.56
bone (os femoris), neonate N16.CNhs11225.1525-43A617.67
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B237.77
cerebellum, neonate N30.CNhs11135.1395-42I242.52
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D118.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.01
corpora quadrigemina, adult.CNhs10501.16-22A442.39
corpus striatum, adult.CNhs10487.19-21D846.67
corpus striatum, neonate N00.CNhs11226.630-43F130.28
cortex, adult.CNhs10473.12-14D576.14
cortex, neonate N30.CNhs11107.1392-42F267.51
diencephalon, adult.CNhs10482.20-12F252.57
diencephalon, neonate N30.CNhs11201.1388-42B270.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.94
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.21
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G48.42
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E214.48
eyeball, embryo E15.CNhs10593.426-16C915.13
eyeball, embryo E17.CNhs11023.1261-18D425.32
eyeball, neonate N00.CNhs11207.633-15C615.78
eyeball, neonate N01.CNhs11140.1532-43E719.22
eyeball, neonate N02.CNhs11205.1551-44G817.90
eyeball, neonate N16.CNhs11188.777-19A230.79
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E25.63
forelimb, embryo E14.CNhs10577.413-26A813.37
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C422.29
forelimb, embryo E18.CNhs11008.1520-43B510.49
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.55
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.96
heart, embryo E11.CNhs10586.331-24E923.61
heart, embryo E12.CNhs11015.353-12F522.51
heart, embryo E13.CNhs11013.376-3I930.43
heart, embryo E14.CNhs10597.403-26D429.59
heart, embryo E15.CNhs11017.431-16C830.70
heart, embryo E16.CNhs11021.457-17C630.85
heart, embryo E17.CNhs11025.479-18E544.18
heart, embryo E18.CNhs11030.1283-20G344.00
heart, neonate N00.CNhs11213.639-21E362.35
heart, neonate N03.CNhs11221.1349-25I264.84
heart, neonate N10.CNhs11118.749-24G1122.47
heart, neonate N16.CNhs11209.782-15G152.86
heart, neonate N20.CNhs11127.821-26I650.29
heart, neonate N25.CNhs11196.1351-25D353.79
heart, neonate N30.CNhs11202.1390-42D255.83
hippocampus, adult.CNhs10478.13-16E870.24
hippocampus, neonate N00.CNhs11228.627-43G130.36
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D85.15
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F29.15
intestine, neonate N10.CNhs11098.755-23A58.97
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G17.57
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F810.40
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I28.35
kidney, embryo E18.CNhs11001.1288-20C77.76
kidney, neonate N00.CNhs11214.646-21G711.15
kidney, neonate N10.CNhs11206.758-6D512.71
kidney, neonate N20.CNhs11113.832-19I117.12
kidney, neonate N25.CNhs11122.1353-25F314.60
kidney, neonate N30.CNhs11203.1385-42H117.15
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B111.82
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C613.07
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A315.50
lung, neonate N10.CNhs11219.750-23E68.77
lung, neonate N20.CNhs11109.822-18A414.09
lung, neonate N25.CNhs11119.1359-25C718.82
lung, neonate N30.CNhs11133.1394-42H213.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C244.15
medulla oblongata, neonate N30.CNhs11200.1396-42A351.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C262.87
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E226.16
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.95
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.47
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.51
olfactory brain, adult.CNhs10489.18-22I940.17
ovary, adult.CNhs10507.91-2I713.91
ovary, embryo E18.CNhs11040.505-44H79.79
ovary, neonate N00.CNhs11217.1299-22I410.59
oviduct, adult pregnant day01.CNhs10500.988-6G611.88
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F410.68
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E56.79
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D711.63
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G844.26
pituitary gland, embryo E12.CNhs11018.346-16E69.54
pituitary gland, embryo E13.CNhs11009.370-44C712.68
pituitary gland, embryo E14.CNhs11037.398-44A520.36
pituitary gland, embryo E15.CNhs10592.427-16B919.68
pituitary gland, embryo E16.CNhs11036.449-43F621.94
pituitary gland, embryo E17.CNhs11039.1265-44F528.47
pituitary gland, neonate N00.CNhs11190.1308-22E932.88
placenta, adult pregnant day10.CNhs10472.539-13I76.10
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F815.66
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G417.28
skin, neonate N03.CNhs11215.662-22H311.10
skin, neonate N06.CNhs11097.693-20I55.85
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C933.01
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C657.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C962.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D358.60
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E34.27
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D45.83
stomach, embryo E17.CNhs11006.1035-18D55.23
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B87.55
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I17.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F511.36
testis, embryo E15.CNhs11034.443-27C516.05
testis, embryo E16.CNhs11033.470-26G511.47
testis, embryo E17.CNhs11029.486-18I516.14
testis, embryo E18.CNhs11027.503-18G513.52
testis, neonate N00.CNhs11189.1300-22B77.39
testis, neonate N07.CNhs11222.726-26I45.86
testis, neonate N10.CNhs11204.763-44D95.14
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I413.58
thymus, embryo E15.CNhs11005.430-45I212.12
thymus, embryo E16.CNhs11002.456-26C58.70
thymus, embryo E17.CNhs10581.478-18C16.27
thymus, embryo E18.CNhs10595.1273-19G47.15
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C45.15
thymus, neonate N07.CNhs11211.713-19D33.81
thymus, neonate N10.CNhs11194.748-24E43.53
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G23.86
tongue, adult.CNhs10499.32-1B437.18
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E412.94
uterus, adult pregnant day19.CNhs10497.590-15F520.27
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A174.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A262.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A367.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A481.52
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A582.34
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A673.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A792.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A891.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A975.08
whole body, embryo E11.CNhs11014.324-5I85.19
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H211.61
whole body, embryo E14.5.CNhs10578.420-27D220.91
whole body, embryo E14.CNhs10519.395-14B118.24
whole body, embryo E16.CNhs10514.453-14F219.12
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.79
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.98
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G525.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G529.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G533.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G529.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G536.07
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G532.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.66
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G531.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G532.66
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G536.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G536.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G535.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.54
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G543.79
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G532.69
whole body, embryo E17.5.CNhs10513.490-9F924.88
whole body, embryo E17.CNhs10517.475-3I529.98
whole body, embryo E18.CNhs10516.493-3B327.84
whole body, neonate N00.CNhs10525.657-19C225.78
whole body, neonate N01.CNhs10576.659-23C633.28
whole body, neonate N06.CNhs10515.692-21D141.47
whole body, neonate N10.CNhs10518.761-6B436.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell1.57e-0739
electrically active cell1.57e-0739

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.43e-2592
central nervous system3.45e-1873
nervous system1.38e-1775
regional part of nervous system4.63e-1754
neural tube5.27e-1652
neural rod5.27e-1652
future spinal cord5.27e-1652
neural keel5.27e-1652
neurectoderm2.54e-1564
neural plate2.54e-1564
presumptive neural plate2.54e-1564
brain2.93e-1547
future brain2.93e-1547
regional part of brain7.69e-1546
ectoderm-derived structure2.35e-1395
ectoderm2.35e-1395
presumptive ectoderm2.35e-1395
anterior neural tube2.95e-1340
regional part of forebrain7.94e-1339
forebrain7.94e-1339
future forebrain7.94e-1339
ecto-epithelium2.33e-1273
pre-chordal neural plate3.38e-1249
gray matter4.75e-1234
brain grey matter2.15e-1129
regional part of telencephalon2.15e-1129
telencephalon2.15e-1129
cardiovascular system3.10e-0923
circulatory system3.10e-0923
tube4.74e-08114
cerebral cortex6.86e-0821
cerebral hemisphere6.86e-0821
pallium6.86e-0821
occipital lobe6.93e-0810
visual cortex6.93e-0810
neocortex6.93e-0810
primary circulatory organ8.56e-0818
heart8.56e-0818
primitive heart tube8.56e-0818
primary heart field8.56e-0818
anterior lateral plate mesoderm8.56e-0818
heart tube8.56e-0818
heart primordium8.56e-0818
cardiac mesoderm8.56e-0818
cardiogenic plate8.56e-0818
heart rudiment8.56e-0818
anatomical conduit9.19e-08122
regional part of cerebral cortex1.13e-0717
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