FFCP PHASE1:Mm9::chr9:57315792..57315881,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56807 | |EntrezGene=56807 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JKD3 | |UniProt=Q9JKD3 | ||
|association_with_transcript=0bp_to_ENSMUST00000046587,NM_020270,uc009puw.1,uc009pux.1_5end | |association_with_transcript=0bp_to_ENSMUST00000046587,NM_020270,uc009puw.1,uc009pux.1_5end | ||
|cluster_id=chr9:57315792..57315881,- | |||
|description=CAGE_peak_1_at_Scamp5_5end | |description=CAGE_peak_1_at_Scamp5_5end | ||
|id=chr9:57315792..57315881,- | |id=chr9:57315792..57315881,- | ||
|ontology_enrichment_celltype=CL:0000221!9.86e-15!44;CL:0000133!9.86e-15!44;CL:0002319!1.49e-14!43;CL:0000055!9.44e-13!50;CL:0000540!1.72e-12!33;CL:0000047!1.72e-12!33;CL:0000031!1.72e-12!33;CL:0000404!1.72e-12!33;CL:0000117!3.55e-12!23;CL:0000337!3.55e-12!23;CL:0000393!6.00e-11!39;CL:0000211!6.00e-11!39;CL:0002321!7.51e-11!70;CL:0000220!7.51e-11!70 | |ontology_enrichment_celltype=CL:0000221!9.86e-15!44;CL:0000133!9.86e-15!44;CL:0002319!1.49e-14!43;CL:0000055!9.44e-13!50;CL:0000540!1.72e-12!33;CL:0000047!1.72e-12!33;CL:0000031!1.72e-12!33;CL:0000404!1.72e-12!33;CL:0000117!3.55e-12!23;CL:0000337!3.55e-12!23;CL:0000393!6.00e-11!39;CL:0000211!6.00e-11!39;CL:0002321!7.51e-11!70;CL:0000220!7.51e-11!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.68e-15,44;CL:0000133,9.68e-15,44;CL:0002319,1.47e-14,43;CL:0000540,1.69e-12,33;CL:0000047,1.69e-12,33;CL:0000031,1.69e-12,33;CL:0000404,1.69e-12,33;CL:0000117,3.50e-12,23;CL:0000337,3.50e-12,23;CL:0000393,5.93e-11,39;CL:0000211,5.93e-11,39;CL:0002321,7.03e-11,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.31e-29!73;UBERON:0005743!1.31e-29!73;UBERON:0000073!2.32e-29!75;UBERON:0001016!2.32e-29!75;UBERON:0001049!8.63e-23!52;UBERON:0005068!8.63e-23!52;UBERON:0006241!8.63e-23!52;UBERON:0007135!8.63e-23!52;UBERON:0004121!2.37e-22!102;UBERON:0000924!2.37e-22!102;UBERON:0006601!2.37e-22!102;UBERON:0000955!3.85e-22!50;UBERON:0006238!3.85e-22!50;UBERON:0002616!1.66e-21!49;UBERON:0002346!4.54e-21!71;UBERON:0003075!4.54e-21!71;UBERON:0007284!4.54e-21!71;UBERON:0000033!1.04e-20!63;UBERON:0002020!7.51e-19!34;UBERON:0003056!4.66e-17!49;UBERON:0003080!1.30e-16!40;UBERON:0002791!2.64e-16!29;UBERON:0003528!2.64e-16!29;UBERON:0001893!2.64e-16!29;UBERON:0002780!5.27e-16!39;UBERON:0001890!5.27e-16!39;UBERON:0006240!5.27e-16!39;UBERON:0000956!6.35e-12!21;UBERON:0001869!6.35e-12!21;UBERON:0000203!6.35e-12!21;UBERON:0002619!2.63e-10!17;UBERON:0002021!7.03e-08!10;UBERON:0000411!7.03e-08!10;UBERON:0001950!7.03e-08!10;UBERON:0000468!9.80e-08!333;UBERON:0003076!7.42e-07!12;UBERON:0003057!7.42e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!1.31e-29!73;UBERON:0005743!1.31e-29!73;UBERON:0000073!2.32e-29!75;UBERON:0001016!2.32e-29!75;UBERON:0001049!8.63e-23!52;UBERON:0005068!8.63e-23!52;UBERON:0006241!8.63e-23!52;UBERON:0007135!8.63e-23!52;UBERON:0004121!2.37e-22!102;UBERON:0000924!2.37e-22!102;UBERON:0006601!2.37e-22!102;UBERON:0000955!3.85e-22!50;UBERON:0006238!3.85e-22!50;UBERON:0002616!1.66e-21!49;UBERON:0002346!4.54e-21!71;UBERON:0003075!4.54e-21!71;UBERON:0007284!4.54e-21!71;UBERON:0000033!1.04e-20!63;UBERON:0002020!7.51e-19!34;UBERON:0003056!4.66e-17!49;UBERON:0003080!1.30e-16!40;UBERON:0002791!2.64e-16!29;UBERON:0003528!2.64e-16!29;UBERON:0001893!2.64e-16!29;UBERON:0002780!5.27e-16!39;UBERON:0001890!5.27e-16!39;UBERON:0006240!5.27e-16!39;UBERON:0000956!6.35e-12!21;UBERON:0001869!6.35e-12!21;UBERON:0000203!6.35e-12!21;UBERON:0002619!2.63e-10!17;UBERON:0002021!7.03e-08!10;UBERON:0000411!7.03e-08!10;UBERON:0001950!7.03e-08!10;UBERON:0000468!9.80e-08!333;UBERON:0003076!7.42e-07!12;UBERON:0003057!7.42e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.26e-29,73;UBERON:0001016,2.23e-29,75;UBERON:0000073,2.86e-24,54;UBERON:0004121,8.40e-24,95;UBERON:0000924,8.40e-24,95;UBERON:0006601,8.40e-24,95;UBERON:0002346,3.07e-23,64;UBERON:0003075,3.07e-23,64;UBERON:0007284,3.07e-23,64;UBERON:0001049,8.38e-23,52;UBERON:0005068,8.38e-23,52;UBERON:0006241,8.38e-23,52;UBERON:0007135,8.38e-23,52;UBERON:0000955,3.93e-20,47;UBERON:0006238,3.93e-20,47;UBERON:0002616,1.65e-19,46;UBERON:0002020,7.34e-19,34;UBERON:0010371,3.46e-18,73;UBERON:0003056,4.56e-17,49;UBERON:0003080,1.27e-16,40;UBERON:0003528,2.59e-16,29;UBERON:0002791,2.59e-16,29;UBERON:0001893,2.59e-16,29;UBERON:0002780,5.17e-16,39;UBERON:0001890,5.17e-16,39;UBERON:0006240,5.17e-16,39;UBERON:0010314,5.71e-13,92;UBERON:0000956,6.26e-12,21;UBERON:0001869,6.26e-12,21;UBERON:0000203,6.26e-12,21;UBERON:0002619,2.60e-10,17;UBERON:0011216,6.08e-09,194;UBERON:0002021,6.96e-08,10;UBERON:0000411,6.96e-08,10;UBERON:0001950,6.96e-08,10;UBERON:0003076,7.37e-07,12;UBERON:0003057,7.37e-07,12 | |||
|phase1_expression=17.6163731815273,54.4401635917403,58.2399026418606,141.855715102903,115.706913617606,26.5249249620786,34.8082834487333,0,0,0,0,0,0,0,3.33109761815663,3.44207954562704,2.79824751251259,0.788655413395594,1.23402990245165,0.42438965179803,50.3456277694333,0.496454756004426,0,41.4380375034923,45.6524469323668,41.9189333803965,40.060865642794,27.3648465511079,37.0545667939929,42.3410617996684,29.4901579171555,0,0,0,23.108129580102,22.7741464141135,20.4169356262369,0,0,0,0,0.683045484958446,0,15.7371022469472,17.2340783073175,13.3989129078028,39.90195856175,48.6196098728396,43.9372365468944,49.385194364868,21.6978953519312,50.3133975277401,0,0,0,14.663787854049,16.0458726365704,17.532851137433,120.985243594039,102.095258999502,138.175245964347,26.0910289693232,20.4537803105562,80.5410246966852,92.9534380812956,87.3890541383703,92.8760342607055,115.265491596466,57.962493280439,65.6128860292017,59.1013141397383,149.109813858785,145.994105569017,64.3076695878509,59.7117284443613,90.083441087782,220.231761998777,275.42158824975,223.190292821322,109.333732528331,120.214763693566,109.39180781692,272.482607025348,186.837186530518,227.05819619634,119.324577116835,112.61599951209,93.7589212501262,15.0695124733036,23.8050414336374,13.3337664802772,11.185510400758,7.47968467078526,10.7940638327563,16.2444104361917,12.5447528387254,22.611551641212,0.170430322578058,0.259786004602869,0,33.0982036475199,11.5493829672886,10.1922095882658,0,4.76280290224671,5.32055717497707,6.57181778519218,26.4906600948219,8.54495016035667,15.7348667408714,13.8788261412909,17.354532263792,14.2981608298756,14.1679282119465,16.6975964132701,10.053327306374,23.7307169024999,5.78397427679647,10.6153266233985,10.1913115466868,5.74187947997023,8.727754556434,48.4618579167118,169.812862266697,159.179497178226,89.9208834334242,0.838705871541442,0.599902730993408,0.508280908292259,220.491821203899,179.79773690772,126.282623873429,293.067803844178,229.376765225306,230.644729461112,201.665889993223,15.8869407606493,9.57933673697716,16.9324248150562,48.822510565662,7.54698569183682,16.3230494147766,20.5270827978098,26.8254575747573,34.4945050697232,34.975045637764,41.3224605308404,101.670424700433,3.88022387279116,5.67318240503458,8.44565395986955,13.1517439456545,12.2340789659263,10.447564995665,11.3180175024369,11.7430217422911,0.702213187313235,0.51469581422943,0.852490498186778,9.32065976409758,5.15957331958412,5.58192390529146,9.46978942340841,7.47704080640135,8.79322543458056,6.0458825635106,6.43856163359086,5.7215017759913,7.40519324610662,11.3275550214576,8.35008738322314,8.91819923294527,10.3188554186794,6.1734952629771,229.005753986335,100.743615519319,342.974696737182,71.401652999157,7.25180051819795,9.28946687441754,10.1805294444454,10.6892268050372,11.5636582799333,14.8375988367796,83.0425857702895,25.1989400727737,23.8768448360256,26.0632978373908,18.1316601020782,76.3996497356088,67.0027954611552,91.4058444237545,8.91439134479484,10.5108631600951,9.01661885384643,9.9789150644204,12.2190066915604,18.0950415317022,23.7769379587207,28.3411484120836,27.0037811887165,25.2964186039691,13.933273473096,8.3422552858047,9.23827277032054,10.3436571697033,10.9544465549792,10.1294407096015,12.4766667372896,11.7955416354832,12.1601420081277,17.0228076176611,37.3797336971122,36.4698128715133,40.5648975048929,31.3197808654419,19.7337154874103,15.4381926836277,4.24932337383191,5.87423376488503,4.23708938749267,3.73439188705414,3.98973422090454,6.365237782789,4.28478553594825,6.43941037930736,7.56648691709717,7.9727288273559,10.5240147313941,4.7520361267564,5.87128938344045,4.05017364028232,37.6978209848181,59.8296252200581,3.93411418415229,3.31124095565679,187.201987925765,189.648508906185,8.6885521049638,6.31177318010932,21.4545589203055,15.6175497718655,37.2682478077742,40.1467580560287,39.2125666385014,43.876862272269,24.6934528021686,26.8875389278407,26.8795689003636,216.249245951876,11.3552068166615,18.8749539887291,15.1484872198826,12.2077890999676,7.96470830039777,12.3818124439041,12.9999129494843,7.73280826999182,14.4697927511579,13.5271465095328,13.4382712447475,21.8120237686503,12.83390562185,7.9009189483954,3.16255825724996,6.18813259489121,39.8314338731932,11.5239100180039,16.6872702079753,13.9319072770535,13.8325382240973,24.4365280114837,26.1632942757372,35.6223990464081,16.4270195644597,36.8587803303047,3.74898276693435,6.26567761177624,10.4951877352339,7.17723806645055,5.61050016814741,4.43180429311665,59.1706098358597,168.922450131574,5.29699730473343,10.9385040020508,7.22258656741876,8.4765805652111,4.10082683163076,6.86334519619568,0,0.139951452323658,0.414599921413271,118.379156633874,9.96458379780576,14.6390016331331,18.468913280528,27.1814784818809,30.1340337969725,43.5611838822971,46.9471628519908,64.1302057860873,59.2340427943493,3.72803587852155,5.07323644815771,10.0176085849466,13.0712207461107,18.4728628926845,18.728174404271,18.5851738039856,17.1341568422801,22.1347454234715,14.8900269084509,4.34851417486811,4.6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| ||
|short_description=p1@Scamp5 | |short_description=p1@Scamp5 | ||
}} | }} |
Latest revision as of 21:31, 26 September 2015
Short description: | p1@Scamp5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scamp5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000046587, NM_020270, uc009puw.1, uc009pux.1_5end |
EntrezGene: | Scamp5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.68e-15 | 44 |
neurectodermal cell | 9.68e-15 | 44 |
neural cell | 1.47e-14 | 43 |
neuron | 1.69e-12 | 33 |
neuronal stem cell | 1.69e-12 | 33 |
neuroblast | 1.69e-12 | 33 |
electrically signaling cell | 1.69e-12 | 33 |
CNS neuron (sensu Vertebrata) | 3.50e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.50e-12 | 23 |
electrically responsive cell | 5.93e-11 | 39 |
electrically active cell | 5.93e-11 | 39 |
embryonic cell | 7.03e-11 | 70 |