FFCP PHASE1:Mm9::chr1:179372666..179372678,+: Difference between revisions
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{{FFCP|EntrezGene=30928|HGNC=|MCL_coexpression_id=76|UniProt=Q9WUK6|association_with_transcript=128bp_to_uc007dul.1_5end|description=CAGE_peak_11_at_Zfp238_5end|id=chr1:179372666..179372678,+|ontology_enrichment_celltype=CL:0000540!6.49e-11!33;CL:0000047!6.49e-11!33;CL:0000031!6.49e-11!33;CL:0000404!6.49e-11!33;CL:0002319!1.22e-10!43;CL:0000221!3.16e-10!44;CL:0000133!3.16e-10!44;CL:0000393!2.51e-09!39;CL:0000211!2.51e-09!39;CL:0000055!4.56e-09!50;CL:0002609!7.75e-09!6;CL:0000117!7.23e-07!23;CL:0000337!7.23e-07!23|ontology_enrichment_celltype_v019_2=CL:0002609,3.23e-52,6;CL:0002608,2.33e-17,3;CL:0000117,5.55e-14,23;CL:0000337,5.55e-14,23;CL:0000540,7.66e-10,33;CL:0000047,7.66e-10,33;CL:0000031,7.66e-10,33;CL:0000404,7.66e-10,33;CL:0000393,2.28e-08,39;CL:0000211,2.28e-08,39;CL:0002319,1.31e-07,43;CL:0000221,1.92e-07,44;CL:0000133,1.92e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!7.86e-08!102;UBERON:0000924!7.86e-08!102;UBERON:0006601!7.86e-08!102;UBERON:0000073!9.96e-08!75;UBERON:0001016!9.96e-08!75;UBERON:0001017!1.29e-07!73;UBERON:0005743!1.29e-07!73;UBERON:0002346!1.54e-07!71;UBERON:0003075!1.54e-07!71;UBERON:0007284!1.54e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.27e-21,21;UBERON:0001869,1.27e-21,21;UBERON:0000203,1.27e-21,21;UBERON:0001954,1.76e-16,7;UBERON:0003022,1.76e-16,7;UBERON:0002421,1.76e-16,7;UBERON:0000349,1.76e-16,7;UBERON:0002600,1.76e-16,7;UBERON:0003528,9.49e-16,29;UBERON:0002791,9.49e-16,29;UBERON:0001893,9.49e-16,29;UBERON:0002616,1.70e-13,46;UBERON:0002020,1.79e-13,34;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0002780,8.93e-12,39;UBERON:0001890,8.93e-12,39;UBERON:0006240,8.93e-12,39;UBERON:0000073,1.59e-11,54;UBERON:0003080,1.74e-11,40;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0003056,2.07e-09,49;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002619,3.40e-07,17;UBERON:0010314,8.41e-07,92|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,3.42175720617976,2.70011876663381,2.73422449756797,0,0,0.367472397644862,1.15014565221884,1.83843757322004,0,0,0,0,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,1.46612694769419,0,0.239630249011841,0,0.254140454146129,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0,0,0,0.452114453507145,0.476255494059295,0.384341160854549,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0.504941854408746,0.315508219416257,0.390438744296638,0.646270193198397,0,0.222798674082394,0.849229592366497,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0.271608227691724,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p11@Zfp238}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=30928 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WUK6 | |||
|association_with_transcript=128bp_to_uc007dul.1_5end | |||
|cluster_id=chr1:179372666..179372678,+ | |||
|description=CAGE_peak_11_at_Zfp238_5end | |||
|id=chr1:179372666..179372678,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.49e-11!33;CL:0000047!6.49e-11!33;CL:0000031!6.49e-11!33;CL:0000404!6.49e-11!33;CL:0002319!1.22e-10!43;CL:0000221!3.16e-10!44;CL:0000133!3.16e-10!44;CL:0000393!2.51e-09!39;CL:0000211!2.51e-09!39;CL:0000055!4.56e-09!50;CL:0002609!7.75e-09!6;CL:0000117!7.23e-07!23;CL:0000337!7.23e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.23e-52,6;CL:0002608,2.33e-17,3;CL:0000117,5.55e-14,23;CL:0000337,5.55e-14,23;CL:0000540,7.66e-10,33;CL:0000047,7.66e-10,33;CL:0000031,7.66e-10,33;CL:0000404,7.66e-10,33;CL:0000393,2.28e-08,39;CL:0000211,2.28e-08,39;CL:0002319,1.31e-07,43;CL:0000221,1.92e-07,44;CL:0000133,1.92e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.86e-08!102;UBERON:0000924!7.86e-08!102;UBERON:0006601!7.86e-08!102;UBERON:0000073!9.96e-08!75;UBERON:0001016!9.96e-08!75;UBERON:0001017!1.29e-07!73;UBERON:0005743!1.29e-07!73;UBERON:0002346!1.54e-07!71;UBERON:0003075!1.54e-07!71;UBERON:0007284!1.54e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.27e-21,21;UBERON:0001869,1.27e-21,21;UBERON:0000203,1.27e-21,21;UBERON:0001954,1.76e-16,7;UBERON:0003022,1.76e-16,7;UBERON:0002421,1.76e-16,7;UBERON:0000349,1.76e-16,7;UBERON:0002600,1.76e-16,7;UBERON:0003528,9.49e-16,29;UBERON:0002791,9.49e-16,29;UBERON:0001893,9.49e-16,29;UBERON:0002616,1.70e-13,46;UBERON:0002020,1.79e-13,34;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0002780,8.93e-12,39;UBERON:0001890,8.93e-12,39;UBERON:0006240,8.93e-12,39;UBERON:0000073,1.59e-11,54;UBERON:0003080,1.74e-11,40;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0003056,2.07e-09,49;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002619,3.40e-07,17;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,3.42175720617976,2.70011876663381,2.73422449756797,0,0,0.367472397644862,1.15014565221884,1.83843757322004,0,0,0,0,0.640413505216868,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,1.46612694769419,0,0.239630249011841,0,0.254140454146129,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0,0,0,0.452114453507145,0.476255494059295,0.384341160854549,0.468508622798644,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,1.23485534855141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0.504941854408746,0.315508219416257,0.390438744296638,0.646270193198397,0,0.222798674082394,0.849229592366497,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0.271608227691724,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p11@Zfp238 | |||
}} |
Latest revision as of 21:22, 26 September 2015
Short description: | p11@Zfp238 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Zfp238_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 128bp_to_uc007dul.1_5end |
EntrezGene: | Zfp238 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.23e-52 | 6 |
hippocampal neuron | 2.33e-17 | 3 |
CNS neuron (sensu Vertebrata) | 5.55e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.55e-14 | 23 |
neuron | 7.66e-10 | 33 |
neuronal stem cell | 7.66e-10 | 33 |
neuroblast | 7.66e-10 | 33 |
electrically signaling cell | 7.66e-10 | 33 |
electrically responsive cell | 2.28e-08 | 39 |
electrically active cell | 2.28e-08 | 39 |
neural cell | 1.31e-07 | 43 |
ectodermal cell | 1.92e-07 | 44 |
neurectodermal cell | 1.92e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.27e-21 | 21 |
cerebral hemisphere | 1.27e-21 | 21 |
pallium | 1.27e-21 | 21 |
Ammon's horn | 1.76e-16 | 7 |
lobe parts of cerebral cortex | 1.76e-16 | 7 |
hippocampal formation | 1.76e-16 | 7 |
limbic system | 1.76e-16 | 7 |
limbic lobe | 1.76e-16 | 7 |
brain grey matter | 9.49e-16 | 29 |
regional part of telencephalon | 9.49e-16 | 29 |
telencephalon | 9.49e-16 | 29 |
regional part of brain | 1.70e-13 | 46 |
gray matter | 1.79e-13 | 34 |
brain | 3.25e-13 | 47 |
future brain | 3.25e-13 | 47 |
neural tube | 5.81e-12 | 52 |
neural rod | 5.81e-12 | 52 |
future spinal cord | 5.81e-12 | 52 |
neural keel | 5.81e-12 | 52 |
regional part of forebrain | 8.93e-12 | 39 |
forebrain | 8.93e-12 | 39 |
future forebrain | 8.93e-12 | 39 |
regional part of nervous system | 1.59e-11 | 54 |
anterior neural tube | 1.74e-11 | 40 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
pre-chordal neural plate | 2.07e-09 | 49 |
ecto-epithelium | 1.47e-08 | 73 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
regional part of cerebral cortex | 3.40e-07 | 17 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |