FFCP PHASE1:Mm9::chr7:52714801..52714827,-: Difference between revisions
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{{FFCP|EntrezGene=14325|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=5bp_to_ENSMUST00000155582_5end|description=CAGE_peak_2_at_Ftl1_5end|id=chr7:52714801..52714827,-|ontology_enrichment_celltype=CL:0000117!3.55e-11!23;CL:0000337!3.55e-11!23;CL:0000540!1.11e-09!33;CL:0000047!1.11e-09!33;CL:0000031!1.11e-09!33;CL:0000404!1.11e-09!33;CL:0002319!8.38e-09!43;CL:0000221!1.22e-08!44;CL:0000133!1.22e-08!44;CL:0000393!1.51e-07!39;CL:0000211!1.51e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-11,23;CL:0000337,3.28e-11,23;CL:0000540,1.04e-09,33;CL:0000047,1.04e-09,33;CL:0000031,1.04e-09,33;CL:0000404,1.04e-09,33;CL:0002319,7.90e-09,43;CL:0000221,1.15e-08,44;CL:0000133,1.15e-08,44;CL:0000393,1.73e-07,39;CL:0000211,1.73e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.84e-17!75;UBERON:0001016!3.84e-17!75;UBERON:0001017!3.99e-17!73;UBERON:0005743!3.99e-17!73;UBERON:0001049!9.31e-16!52;UBERON:0005068!9.31e-16!52;UBERON:0006241!9.31e-16!52;UBERON:0007135!9.31e-16!52;UBERON:0002020!3.45e-15!34;UBERON:0003056!7.04e-15!49;UBERON:0002780!2.05e-14!39;UBERON:0001890!2.05e-14!39;UBERON:0006240!2.05e-14!39;UBERON:0003080!2.25e-14!40;UBERON:0002346!4.75e-14!71;UBERON:0003075!4.75e-14!71;UBERON:0007284!4.75e-14!71;UBERON:0000153!2.51e-13!94;UBERON:0000955!6.68e-13!50;UBERON:0006238!6.68e-13!50;UBERON:0002616!7.79e-13!49;UBERON:0000033!1.95e-12!63;UBERON:0007811!3.25e-12!86;UBERON:0002791!4.04e-12!29;UBERON:0003528!4.04e-12!29;UBERON:0001893!4.04e-12!29;UBERON:0004121!1.72e-11!102;UBERON:0000924!1.72e-11!102;UBERON:0006601!1.72e-11!102;UBERON:0000956!1.19e-09!21;UBERON:0001869!1.19e-09!21;UBERON:0000203!1.19e-09!21;UBERON:0002619!1.50e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.38e-17,75;UBERON:0001017,3.52e-17,73;UBERON:0002346,2.28e-16,64;UBERON:0003075,2.28e-16,64;UBERON:0007284,2.28e-16,64;UBERON:0001049,8.30e-16,52;UBERON:0005068,8.30e-16,52;UBERON:0006241,8.30e-16,52;UBERON:0007135,8.30e-16,52;UBERON:0000073,8.31e-16,54;UBERON:0002020,3.09e-15,34;UBERON:0003056,5.95e-15,49;UBERON:0002780,1.85e-14,39;UBERON:0001890,1.85e-14,39;UBERON:0006240,1.85e-14,39;UBERON:0003080,2.02e-14,40;UBERON:0000955,3.92e-13,47;UBERON:0006238,3.92e-13,47;UBERON:0002616,4.48e-13,46;UBERON:0004121,6.53e-13,95;UBERON:0000924,6.53e-13,95;UBERON:0006601,6.53e-13,95;UBERON:0010371,8.31e-13,73;UBERON:0003528,3.70e-12,29;UBERON:0002791,3.70e-12,29;UBERON:0001893,3.70e-12,29;UBERON:0000956,1.11e-09,21;UBERON:0001869,1.11e-09,21;UBERON:0000203,1.11e-09,21;UBERON:0010314,8.12e-09,92;UBERON:0002619,1.43e-07,17|phase1_expression=7.36684696682052,2.09385244583617,1.81999695755814,0.30246421130683,0,1.17515490338323,1.63528848416868,8.65126267058561,3.51971805379167,4.91535505276186,3.5955773327356,5.90313976565489,5.9920255475922,9.70366466850871,2.99798785634096,0.607425802169478,0.699561878128147,1.73504190947031,0.959801035240171,0.84877930359606,2.29616883407888,4.17021995043718,5.22399578277871,1.43993180514066,1.83527424853736,1.14846392823004,3.01533397311352,0.430942465371778,0.950117097281869,1.51218077855958,3.99114919179548,0.635030673459631,2.46025915033828,0,1.73310971850765,1.16364251750945,1.22501613757421,1.25559489221072,2.3440060335714,1.0470474879476,1.17646297606203,2.04913645487534,1.94204141212461,1.1330713617802,0.912392380975631,4.22157529971868,3.9119567217402,4.57852828398938,2.63623419281366,1.55543919259427,4.05960622713551,2.87505128729943,1.17447824240415,3.62681071005672,5.04140698713696,3.60163210450326,3.43840127926508,2.06268836910977,37.226228798166,60.8339626162838,47.5373552629634,10.8430250262122,8.89294796111139,9.89889689009539,14.8329954385046,7.104801149461,6.5912024314049,6.14749288514487,40.0241903510724,45.2269893411164,43.3269420383847,27.7081454871689,27.1668305370485,49.4862828828414,41.3093980088599,38.6071890376209,5.50579404996943,3.57524546638526,3.84016333140609,45.7645418423773,46.2927476628193,47.9240300912219,4.18774498502071,5.06486349028512,5.95913166329559,29.4628585473668,29.8980529678116,40.4486797440902,4.92220256665696,4.1564358058732,0.579728977403356,0,0,0,0,0,0.983110940922263,1.53387290320252,3.11743205523443,1.06001872353102,3.23939865486365,0,0,0,2.81438353314578,3.54703811665138,2.02209778005913,0.68510327831436,1.03575153458869,0.890652834388949,5.89850111004862,4.56698217468212,2.7673859670727,3.01445281105245,1.76383060703557,0.753999547978053,0.741584903203122,0.578397427679647,0,2.91180329905337,1.54589062922275,1.93950101254089,0,2.34224637609238,3.97948742945565,0.766371165625774,5.99075622529601,7.19883277192089,7.49714339731082,4.79330046095433,5.03250663100489,53.780062704306,6.77914848749878,8.18289463457058,3.32460871295296,4.54275536589721,5.90668310331835,1.49288364732112,0.505445516867349,0.420883711772948,10.1493945510909,10.3455946995063,5.76198815377118,8.43946979880004,6.53150391852747,6.66191345481219,6.93392761741993,1.29351685369508,10.1316956678436,10.58994048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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14325 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENSMUST00000155582_5end | |||
|cluster_id=chr7:52714801..52714827,- | |||
|description=CAGE_peak_2_at_Ftl1_5end | |||
|id=chr7:52714801..52714827,- | |||
|ontology_enrichment_celltype=CL:0000117!3.55e-11!23;CL:0000337!3.55e-11!23;CL:0000540!1.11e-09!33;CL:0000047!1.11e-09!33;CL:0000031!1.11e-09!33;CL:0000404!1.11e-09!33;CL:0002319!8.38e-09!43;CL:0000221!1.22e-08!44;CL:0000133!1.22e-08!44;CL:0000393!1.51e-07!39;CL:0000211!1.51e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-11,23;CL:0000337,3.28e-11,23;CL:0000540,1.04e-09,33;CL:0000047,1.04e-09,33;CL:0000031,1.04e-09,33;CL:0000404,1.04e-09,33;CL:0002319,7.90e-09,43;CL:0000221,1.15e-08,44;CL:0000133,1.15e-08,44;CL:0000393,1.73e-07,39;CL:0000211,1.73e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.84e-17!75;UBERON:0001016!3.84e-17!75;UBERON:0001017!3.99e-17!73;UBERON:0005743!3.99e-17!73;UBERON:0001049!9.31e-16!52;UBERON:0005068!9.31e-16!52;UBERON:0006241!9.31e-16!52;UBERON:0007135!9.31e-16!52;UBERON:0002020!3.45e-15!34;UBERON:0003056!7.04e-15!49;UBERON:0002780!2.05e-14!39;UBERON:0001890!2.05e-14!39;UBERON:0006240!2.05e-14!39;UBERON:0003080!2.25e-14!40;UBERON:0002346!4.75e-14!71;UBERON:0003075!4.75e-14!71;UBERON:0007284!4.75e-14!71;UBERON:0000153!2.51e-13!94;UBERON:0000955!6.68e-13!50;UBERON:0006238!6.68e-13!50;UBERON:0002616!7.79e-13!49;UBERON:0000033!1.95e-12!63;UBERON:0007811!3.25e-12!86;UBERON:0002791!4.04e-12!29;UBERON:0003528!4.04e-12!29;UBERON:0001893!4.04e-12!29;UBERON:0004121!1.72e-11!102;UBERON:0000924!1.72e-11!102;UBERON:0006601!1.72e-11!102;UBERON:0000956!1.19e-09!21;UBERON:0001869!1.19e-09!21;UBERON:0000203!1.19e-09!21;UBERON:0002619!1.50e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.38e-17,75;UBERON:0001017,3.52e-17,73;UBERON:0002346,2.28e-16,64;UBERON:0003075,2.28e-16,64;UBERON:0007284,2.28e-16,64;UBERON:0001049,8.30e-16,52;UBERON:0005068,8.30e-16,52;UBERON:0006241,8.30e-16,52;UBERON:0007135,8.30e-16,52;UBERON:0000073,8.31e-16,54;UBERON:0002020,3.09e-15,34;UBERON:0003056,5.95e-15,49;UBERON:0002780,1.85e-14,39;UBERON:0001890,1.85e-14,39;UBERON:0006240,1.85e-14,39;UBERON:0003080,2.02e-14,40;UBERON:0000955,3.92e-13,47;UBERON:0006238,3.92e-13,47;UBERON:0002616,4.48e-13,46;UBERON:0004121,6.53e-13,95;UBERON:0000924,6.53e-13,95;UBERON:0006601,6.53e-13,95;UBERON:0010371,8.31e-13,73;UBERON:0003528,3.70e-12,29;UBERON:0002791,3.70e-12,29;UBERON:0001893,3.70e-12,29;UBERON:0000956,1.11e-09,21;UBERON:0001869,1.11e-09,21;UBERON:0000203,1.11e-09,21;UBERON:0010314,8.12e-09,92;UBERON:0002619,1.43e-07,17 | |||
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| |||
|short_description=p2@Ftl1 | |||
}} |
Latest revision as of 21:15, 26 September 2015
Short description: | p2@Ftl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ftl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 5bp_to_ENSMUST00000155582_5end |
EntrezGene: | Ftl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.28e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.28e-11 | 23 |
neuron | 1.04e-09 | 33 |
neuronal stem cell | 1.04e-09 | 33 |
neuroblast | 1.04e-09 | 33 |
electrically signaling cell | 1.04e-09 | 33 |
neural cell | 7.90e-09 | 43 |
ectodermal cell | 1.15e-08 | 44 |
neurectodermal cell | 1.15e-08 | 44 |
electrically responsive cell | 1.73e-07 | 39 |
electrically active cell | 1.73e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.38e-17 | 75 |
central nervous system | 3.52e-17 | 73 |
neurectoderm | 2.28e-16 | 64 |
neural plate | 2.28e-16 | 64 |
presumptive neural plate | 2.28e-16 | 64 |
neural tube | 8.30e-16 | 52 |
neural rod | 8.30e-16 | 52 |
future spinal cord | 8.30e-16 | 52 |
neural keel | 8.30e-16 | 52 |
regional part of nervous system | 8.31e-16 | 54 |
gray matter | 3.09e-15 | 34 |
pre-chordal neural plate | 5.95e-15 | 49 |
regional part of forebrain | 1.85e-14 | 39 |
forebrain | 1.85e-14 | 39 |
future forebrain | 1.85e-14 | 39 |
anterior neural tube | 2.02e-14 | 40 |
brain | 3.92e-13 | 47 |
future brain | 3.92e-13 | 47 |
regional part of brain | 4.48e-13 | 46 |
ectoderm-derived structure | 6.53e-13 | 95 |
ectoderm | 6.53e-13 | 95 |
presumptive ectoderm | 6.53e-13 | 95 |
ecto-epithelium | 8.31e-13 | 73 |
brain grey matter | 3.70e-12 | 29 |
regional part of telencephalon | 3.70e-12 | 29 |
telencephalon | 3.70e-12 | 29 |
cerebral cortex | 1.11e-09 | 21 |
cerebral hemisphere | 1.11e-09 | 21 |
pallium | 1.11e-09 | 21 |
structure with developmental contribution from neural crest | 8.12e-09 | 92 |
regional part of cerebral cortex | 1.43e-07 | 17 |