FFCP PHASE1:Mm9::chr7:52714769..52714795,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:52714769..52714795,-
|short_description=p3@Ftl1
|description=CAGE_peak_3_at_Ftl1_5end
|association_with_transcript=0bp_to_ENSMUST00000124261_5end
|EntrezG...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14325 | |EntrezGene=14325 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000124261_5end | |||
|cluster_id=chr7:52714769..52714795,- | |||
|description=CAGE_peak_3_at_Ftl1_5end | |||
|id=chr7:52714769..52714795,- | |||
|ontology_enrichment_celltype=CL:0000221!5.84e-13!44;CL:0000133!5.84e-13!44;CL:0002319!6.48e-13!43;CL:0000540!1.11e-10!33;CL:0000047!1.11e-10!33;CL:0000031!1.11e-10!33;CL:0000404!1.11e-10!33;CL:0000117!1.29e-10!23;CL:0000337!1.29e-10!23;CL:0000055!1.38e-10!50;CL:0000393!3.62e-09!39;CL:0000211!3.62e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.79e-13,44;CL:0000133,3.79e-13,44;CL:0002319,4.23e-13,43;CL:0000540,8.56e-11,33;CL:0000047,8.56e-11,33;CL:0000031,8.56e-11,33;CL:0000404,8.56e-11,33;CL:0000117,1.08e-10,23;CL:0000337,1.08e-10,23;CL:0000393,4.33e-09,39;CL:0000211,4.33e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.28e-11!75;UBERON:0001016!1.28e-11!75;UBERON:0001017!3.24e-11!73;UBERON:0005743!3.24e-11!73;UBERON:0004121!9.82e-10!102;UBERON:0000924!9.82e-10!102;UBERON:0006601!9.82e-10!102;UBERON:0002346!1.17e-09!71;UBERON:0003075!1.17e-09!71;UBERON:0007284!1.17e-09!71;UBERON:0003056!9.56e-09!49;UBERON:0001049!2.83e-08!52;UBERON:0005068!2.83e-08!52;UBERON:0006241!2.83e-08!52;UBERON:0007135!2.83e-08!52;UBERON:0002020!1.01e-07!34;UBERON:0000033!3.91e-07!63;UBERON:0002780!4.60e-07!39;UBERON:0001890!4.60e-07!39;UBERON:0006240!4.60e-07!39;UBERON:0003080!6.44e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.47e-11,75;UBERON:0001017,8.89e-11,73;UBERON:0002346,3.67e-10,64;UBERON:0003075,3.67e-10,64;UBERON:0007284,3.67e-10,64;UBERON:0004121,9.62e-10,95;UBERON:0000924,9.62e-10,95;UBERON:0006601,9.62e-10,95;UBERON:0003056,1.55e-08,49;UBERON:0010371,7.63e-08,73;UBERON:0001049,9.52e-08,52;UBERON:0005068,9.52e-08,52;UBERON:0006241,9.52e-08,52;UBERON:0007135,9.52e-08,52;UBERON:0002020,1.42e-07,34;UBERON:0000073,1.44e-07,54;UBERON:0002780,7.83e-07,39;UBERON:0001890,7.83e-07,39;UBERON:0006240,7.83e-07,39;UBERON:0010314,8.95e-07,92 | |||
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| ||
|short_description=p3@Ftl1 | |||
}} | }} |
Latest revision as of 21:15, 26 September 2015
Short description: | p3@Ftl1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ftl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000124261_5end |
EntrezGene: | Ftl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.79e-13 | 44 |
neurectodermal cell | 3.79e-13 | 44 |
neural cell | 4.23e-13 | 43 |
neuron | 8.56e-11 | 33 |
neuronal stem cell | 8.56e-11 | 33 |
neuroblast | 8.56e-11 | 33 |
electrically signaling cell | 8.56e-11 | 33 |
CNS neuron (sensu Vertebrata) | 1.08e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-10 | 23 |
electrically responsive cell | 4.33e-09 | 39 |
electrically active cell | 4.33e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.47e-11 | 75 |
central nervous system | 8.89e-11 | 73 |
neurectoderm | 3.67e-10 | 64 |
neural plate | 3.67e-10 | 64 |
presumptive neural plate | 3.67e-10 | 64 |
ectoderm-derived structure | 9.62e-10 | 95 |
ectoderm | 9.62e-10 | 95 |
presumptive ectoderm | 9.62e-10 | 95 |
pre-chordal neural plate | 1.55e-08 | 49 |
ecto-epithelium | 7.63e-08 | 73 |
neural tube | 9.52e-08 | 52 |
neural rod | 9.52e-08 | 52 |
future spinal cord | 9.52e-08 | 52 |
neural keel | 9.52e-08 | 52 |
gray matter | 1.42e-07 | 34 |
regional part of nervous system | 1.44e-07 | 54 |
regional part of forebrain | 7.83e-07 | 39 |
forebrain | 7.83e-07 | 39 |
future forebrain | 7.83e-07 | 39 |
structure with developmental contribution from neural crest | 8.95e-07 | 92 |