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FFCP PHASE1:Mm9::chr17:74738040..74738089,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:74738040..74738089,+
|DHSsupport=NA
|short_description=p1@Spast
|DPIdataset=NA
|description=CAGE_peak_1_at_Spast_5end
|association_with_transcript=-237bp_to_ENSMUST00000024869,NM_001162870,NM_016962,uc008dnz.2,uc008doa.2_5end
|EntrezGene=50850
|EntrezGene=50850
|HGNC=
|HGNC=
|MCL_coexpression_id=482
|TSSclassifier=NA
|UniProt=Q9QYY8
|UniProt=Q9QYY8
|association_with_transcript=-237bp_to_ENSMUST00000024869,NM_001162870,NM_016962,uc008dnz.2,uc008doa.2_5end
|cluster_id=chr17:74738040..74738089,+
|description=CAGE_peak_1_at_Spast_5end
|id=chr17:74738040..74738089,+
|ontology_enrichment_celltype=CL:0000117!7.33e-10!23;CL:0000337!7.33e-10!23;CL:0000540!4.92e-07!33;CL:0000047!4.92e-07!33;CL:0000031!4.92e-07!33;CL:0000404!4.92e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,7.32e-10,23;CL:0000337,7.32e-10,23;CL:0000540,4.92e-07,33;CL:0000047,4.92e-07,33;CL:0000031,4.92e-07,33;CL:0000404,4.92e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.39e-15!94;UBERON:0002020!1.28e-14!34;UBERON:0001049!1.42e-14!52;UBERON:0005068!1.42e-14!52;UBERON:0006241!1.42e-14!52;UBERON:0007135!1.42e-14!52;UBERON:0007811!4.35e-14!86;UBERON:0003056!2.60e-13!49;UBERON:0000955!4.44e-13!50;UBERON:0006238!4.44e-13!50;UBERON:0000033!4.96e-13!63;UBERON:0003080!9.06e-13!40;UBERON:0002791!1.20e-12!29;UBERON:0003528!1.20e-12!29;UBERON:0001893!1.20e-12!29;UBERON:0002616!1.46e-12!49;UBERON:0001017!1.86e-12!73;UBERON:0005743!1.86e-12!73;UBERON:0002780!2.72e-12!39;UBERON:0001890!2.72e-12!39;UBERON:0006240!2.72e-12!39;UBERON:0000073!3.05e-12!75;UBERON:0001016!3.05e-12!75;UBERON:0002346!8.31e-12!71;UBERON:0003075!8.31e-12!71;UBERON:0007284!8.31e-12!71;UBERON:0000956!2.96e-10!21;UBERON:0001869!2.96e-10!21;UBERON:0000203!2.96e-10!21;UBERON:0004121!3.57e-10!102;UBERON:0000924!3.57e-10!102;UBERON:0006601!3.57e-10!102;UBERON:0002619!7.39e-08!17;UBERON:0002021!5.88e-07!10;UBERON:0000411!5.88e-07!10;UBERON:0001950!5.88e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.30e-14,34;UBERON:0001049,1.44e-14,52;UBERON:0005068,1.44e-14,52;UBERON:0006241,1.44e-14,52;UBERON:0007135,1.44e-14,52;UBERON:0000073,1.51e-14,54;UBERON:0010371,3.37e-14,73;UBERON:0002346,3.60e-14,64;UBERON:0003075,3.60e-14,64;UBERON:0007284,3.60e-14,64;UBERON:0003056,2.63e-13,49;UBERON:0000955,5.43e-13,47;UBERON:0006238,5.43e-13,47;UBERON:0003080,9.15e-13,40;UBERON:0003528,1.22e-12,29;UBERON:0002791,1.22e-12,29;UBERON:0001893,1.22e-12,29;UBERON:0002616,1.80e-12,46;UBERON:0001017,1.87e-12,73;UBERON:0002780,2.75e-12,39;UBERON:0001890,2.75e-12,39;UBERON:0006240,2.75e-12,39;UBERON:0001016,3.08e-12,75;UBERON:0004121,9.41e-12,95;UBERON:0000924,9.41e-12,95;UBERON:0006601,9.41e-12,95;UBERON:0000956,2.99e-10,21;UBERON:0001869,2.99e-10,21;UBERON:0000203,2.99e-10,21;UBERON:0010314,3.18e-08,92;UBERON:0002619,7.48e-08,17;UBERON:0002021,5.88e-07,10;UBERON:0000411,5.88e-07,10;UBERON:0001950,5.88e-07,10
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8399239065,6.76923947613151,5.25970950900801,5.70308844504818,3.40282724579238,2.59229946583586,1.24267862617385,8.45539408026285,13.6060056900021,11.2511773510826,11.2781689239548,13.3034618182063,10.644235905919,10.2100797621806,9.24451132392046,9.85677837601682,7.9722759872582,8.3528701814781,11.6924114632426,8.5144590421869,8.42229848751584,9.09445760844565,8.95133478337407,10.9274745129696,16.4667765842357,10.1905773750458,12.1159739937777,12.95515713135,11.8974898461472,13.0593560191268,12.8923867798041,12.9733361421542,2.94749498699775,1.77588762699252,2.15313255862742,2.68615386182526,5.40930863290133,3.75364950902364,6.41030684935428,5.35920947697665,2.00628841614145,33.3203587144069,21.1749608793301,22.9158205375759,12.8889886757766,15.7568979547248,20.3956352295219,16.8755625057951,18.9134905354173,28.5479717660049,20.192652158321,9.02949923982337,13.9658705690361,14.3416228833473,8.265628380322,13.8344687334468,13.052889099951,11.1123363900808,14.2164189494837,12.5158491740808,9.6024940470243,9.37873409593887,13.2038438970253,12.5479620009642,13.0611310905933,10.7404326946997,11.4310485907938,10.3137050090921,11.9603716687497,10.3021475200827,12.953504971827,9.94320831917705,8.5188386956482,10.2527561677348,10.7556348307923,13.081203877731,10.2383675548929,12.8049581010941,10.2597187460759,10.5927208799772,11.2228454331548,12.2194068667899,12.8055827088233,8.18462086339379,12.2400104536913,10.4169569929816,26.2301106834843,11.462648813825,12.8922632428979,9.37312827137333,8.16188250742207,5.33296021926969
|phase1_expression=17.6163731815273,1.39590163055744,1.81999695755814,1.81478526784098,3.00537437967808,3.52546471014969,3.27057696833736,3.74457637980571,5.06839399746,4.21316147379588,2.91070545983358,1.99430397488341,5.82082481766099,5.07038334030185,4.66353666541928,2.42970320867791,1.39912375625629,7.72882305127682,9.1866670515845,7.21462408056651,5.52781385981954,2.87943758482567,2.35079810225042,3.67982572424835,2.06468352960453,0.57423196411502,2.58457197695445,1.72376986148711,2.28028103347649,1.00812051903972,1.10865255327652,3.17515336729816,3.69038872550742,0,1.1554064790051,1.16364251750945,2.45003227514843,8.78916424547506,7.813353445238,7.32933241563318,4.70585190424811,11.6117732442936,8.73918635456076,2.01434908760924,2.93993100536592,3.85448179539531,6.25913075478431,2.8343270329458,0.659058548203415,4.27745777963423,5.17949760013841,1.43752564364972,10.9058693937529,6.5282592781021,9.41062637598899,3.60163210450326,5.15760191889762,2.57836046138721,27.1104057551861,24.8625760257855,19.0149421051854,3.38844532069132,0.889294796111139,3.5995988691256,3.9554654502679,3.5524005747305,2.39680088414724,3.07374644257244,34.2175720617976,34.9665380279079,26.5009451302741,11.1403883917483,12.589506834242,38.8295833511404,37.8589610522034,35.8495326777908,3.30347642998166,15.1947932321373,10.752457327937,26.6410301214992,32.5696011224578,38.0266760506435,6.70039197603314,8.4414391504752,8.40390362772456,10.9012576625257,19.0778052270798,20.3175395949578,6.6639050133202,6.04572480854284,2.31891590961342,5.16254326188832,0,2.15881276655127,0.649776417447669,0.448026887097336,3.5111105032938,3.06774580640504,3.63700406444016,1.06001872353102,9.85903938436764,3.84979432242953,7.64415719119937,7.11066703153331,0.865964164044856,0.760079596425296,0,2.2836775943812,1.29468941823586,2.82040064223167,5.20455980298408,5.1759131313064,5.99600292865752,4.52167921657868,5.87943535678524,2.76466500925286,4.44950941921873,1.01219549843938,3.5384422077995,7.117741397686,6.8460870722722,3.39412677194655,3.72783522436244,9.66176630138106,15.7085030110091,2.81002760729451,2.75574786363617,3.59941638596045,3.17675567682662,14.8292733010774,12.3525162761029,56.6701128029018,16.5133104182663,22.2472447877388,11.2205544062162,14.9261962022337,13.7483141197927,5.47390670684409,1.76905930903572,5.89237196482127,10.2795149940536,9.19608417733892,9.00310649026746,10.7000420663358,9.66118287948856,8.71173297936978,13.6804517857204,6.20888089773638,10.7783996466421,15.3175924935934,16.5394056714112,13.8093311429372,10.8438427197983,10.0993128291428,8.64284972913362,12.7381930763836,2.1066395619397,3.60287069960601,2.84163499395593,5.79952163099405,5.15957331958412,6.66229627405755,5.44512891845984,5.70616272067471,5.24508183817086,6.74348439776183,4.82892122519315,5.83826711835847,5.26591519723137,3.61168420974009,3.64809642956351,4.67839959761063,5.26920276698522,2.95254121272818,16.4026159880019,48.2622632058844,1.98251269790279,2.3800550999719,10.6644125267617,11.6118335930219,6.82997545007095,5.24377164020691,4.89231696458715,3.61428689613862,1.89811624617805,5.10566759644434,6.28338022000674,6.96347652144028,4.48417400373976,4.49409704327111,1.72910439899755,3.38540164532424,4.93136542478012,6.51216521875454,7.88954149711563,7.94240178596726,6.59438456369928,6.66290288958026,5.75452487830741,2.36176236767363,3.92496819603437,1.23397163921801,1.48226313543574,3.17005700860579,3.53806191203765,3.37293168577281,3.44862206360455,1.92941727801933,3.05551022137704,1.72617682470486,4.70192157647603,1.92192989231657,15.814502718009,3.72140947668503,2.18426371180192,2.02063102357689,1.4351793081753,1.92977408545347,3.51031061316549,8.33762211790133,7.49638891633319,7.1292936025579,7.97946844180907,7.53778158488171,8.80761471278251,6.82967767502296,9.30047350226527,7.9727288273559,10.2051051940792,4.58817281204066,5.00786447411097,3.90552458170081,3.01582567878545,1.08781136763742,1.47529281905711,1.65562047782839,7.70642831941401,10.5490517932983,8.6885521049638,7.57412781613119,4.73262329124385,2.73307121007647,7.53981892064796,6.69112634267146,6.46116154838943,9.34152551603147,2.83367491172426,3.50707029493574,5.53402889125133,16.708708453934,5.96148357874728,12.2865266530406,14.1711654637611,6.59880491890142,1.32745138339963,10.4395673546642,4.83717691143602,3.58349651536206,4.13422650033082,6.7635732547664,5.94385074286909,5.45300594216258,1.78248689192361,4.10847785316561,1.05418608574999,4.12542172992747,2.38307724027652,11.1637878299412,8.14959707831353,8.78781843629528,10.1083933176096,9.27517851530767,9.87294123612726,4.87143918583359,3.28540391289194,6.99045833850607,0.661585194164886,7.74965388824956,10.6566521619298,9.16756458907969,11.340372680298,11.6540038818993,3.20628920292836,9.45669040253599,3.2465467351592,10.1129565301979,4.44466865687308,4.70921142511728,2.59719032669948,5.0331198105435,4.9293744698218,2.09927178485487,5.38979897837253,1.90934123603023,11.5462637657114,8.13277868507395,6.58832579012988,5.64538399239065,6.76923947613151,5.25970950900801,5.70308844504818,3.40282724579238,2.59229946583586,1.24267862617385,8.45539408026285,13.6060056900021,11.2511773510826,11.2781689239548,13.3034618182063,10.644235905919,10.2100797621806,9.24451132392046,9.85677837601682,7.9722759872582,8.3528701814781,11.6924114632426,8.5144590421869,8.42229848751584,9.09445760844565,8.95133478337407,10.9274745129696,16.4667765842357,10.1905773750458,12.1159739937777,12.95515713135,11.8974898461472,13.0593560191268,12.8923867798041,12.9733361421542,2.94749498699775,1.77588762699252,2.15313255862742,2.68615386182526,5.40930863290133,3.75364950902364,6.41030684935428,5.35920947697665,2.00628841614145,33.3203587144069,21.1749608793301,22.9158205375759,12.8889886757766,15.7568979547248,20.3956352295219,16.8755625057951,18.9134905354173,28.5479717660049,20.192652158321,9.02949923982337,13.9658705690361,14.3416228833473,8.265628380322,13.8344687334468,13.052889099951,11.1123363900808,14.2164189494837,12.5158491740808,9.6024940470243,9.37873409593887,13.2038438970253,12.5479620009642,13.0611310905933,10.7404326946997,11.4310485907938,10.3137050090921,11.9603716687497,10.3021475200827,12.953504971827,9.94320831917705,8.5188386956482,10.2527561677348,10.7556348307923,13.081203877731,10.2383675548929,12.8049581010941,10.2597187460759,10.5927208799772,11.2228454331548,12.2194068667899,12.8055827088233,8.18462086339379,12.2400104536913,10.4169569929816,26.2301106834843,11.462648813825,12.8922632428979,9.37312827137333,8.16188250742207,5.33296021926969
|short_description=p1@Spast
}}
}}

Latest revision as of 21:15, 26 September 2015

Short description:p1@Spast
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Spast_5end
Coexpression cluster:MCL_coexpression_mm9:482
Association with transcript: -237bp_to_ENSMUST00000024869, NM_001162870, NM_016962, uc008dnz.2, uc008doa.2_5end
EntrezGene:Spast
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Spast

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.07
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H211.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C327.11
Mouse Granule cells, donor2.CNhs12357.11731-123E324.86
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D926.50
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D238.83
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F237.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D635.85
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F432.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D838.03
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.32
Mouse Schwann, donor1.CNhs12507.11728-123D96.66
Mouse Schwann, donor2.CNhs12573.11746-123F96.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F54.52
adrenal gland, neonate N00.CNhs11191.1311-23C15.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F57.12
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B29.66
cerebellum, neonate N30.CNhs11135.1395-42I215.71
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A414.83
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F156.67
cortex, adult.CNhs10473.12-14D516.51
cortex, neonate N30.CNhs11107.1392-42F222.25
diencephalon, adult.CNhs10482.20-12F211.22
diencephalon, neonate N30.CNhs11201.1388-42B214.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.47
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C610.28
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C99.00
eyeball, embryo E17.CNhs11023.1261-18D410.70
eyeball, neonate N00.CNhs11207.633-15C69.66
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G813.68
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E210.78
forelimb, embryo E12.CNhs10600.359-14H215.32
forelimb, embryo E13.CNhs10589.384-1E216.54
forelimb, embryo E14.CNhs10577.413-26A813.81
forelimb, embryo E15.CNhs11007.437-20E710.84
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B58.64
gonad, embryo E13.CNhs11044.1564-45I612.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I96.66
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C85.71
heart, embryo E16.CNhs11021.457-17C65.25
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E35.84
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G13.61
heart, neonate N16.CNhs11209.782-15G13.65
heart, neonate N20.CNhs11127.821-26I64.68
heart, neonate N25.CNhs11196.1351-25D35.27
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E816.40
hippocampus, neonate N00.CNhs11228.627-43G148.26
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I510.66
intestine, embryo E13.CNhs11010.381-16D511.61
intestine, embryo E15.CNhs10602.976-16D86.83
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B86.28
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I94.93
kidney, embryo E15.CNhs10997.434-16F86.51
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C76.59
kidney, neonate N00.CNhs11214.646-21G76.66
kidney, neonate N10.CNhs11206.758-6D55.75
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F44.70
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G28.34
lung, embryo E14.CNhs10604.404-26F87.50
lung, embryo E15.CNhs11020.432-17C57.13
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A67.54
lung, embryo E18.CNhs10583.1287-20I68.81
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E59.30
lung, neonate N07.CNhs11111.715-19A37.97
lung, neonate N10.CNhs11219.750-23E610.21
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A310.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I75.96
ovary, embryo E18.CNhs11040.505-44H712.29
ovary, neonate N00.CNhs11217.1299-22I414.17
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E611.16
pituitary gland, embryo E13.CNhs11009.370-44C78.15
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F69.28
pituitary gland, embryo E17.CNhs11039.1265-44F59.87
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C37.75
skin, neonate N00.CNhs11124.650-25G410.66
skin, neonate N03.CNhs11215.662-22H39.17
skin, neonate N06.CNhs11097.693-20I511.34
skin, neonate N10.CNhs11108.762-6C411.65
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C99.46
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C110.11
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.39
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E311.55
stomach, embryo E15.CNhs10603.1252-16G88.13
stomach, embryo E16.CNhs11022.459-17D46.59
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A95.70
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F513.61
testis, embryo E15.CNhs11034.443-27C511.25
testis, embryo E16.CNhs11033.470-26G511.28
testis, embryo E17.CNhs11029.486-18I513.30
testis, embryo E18.CNhs11027.503-18G510.64
testis, neonate N00.CNhs11189.1300-22B710.21
testis, neonate N07.CNhs11222.726-26I49.24
testis, neonate N10.CNhs11204.763-44D99.86
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E28.35
thymus, adult.CNhs10471.38-12B511.69
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I28.42
thymus, embryo E16.CNhs11002.456-26C59.09
thymus, embryo E17.CNhs10581.478-18C18.95
thymus, embryo E18.CNhs10595.1273-19G410.93
thymus, neonate N02.CNhs11181.1541-43F816.47
thymus, neonate N03.CNhs11137.2104-43C710.19
thymus, neonate N06.CNhs11197.681-26C412.12
thymus, neonate N07.CNhs11211.713-19D312.96
thymus, neonate N10.CNhs11194.748-24E411.90
thymus, neonate N20.CNhs11186.820-7A213.06
thymus, neonate N25.CNhs11125.1362-25G712.89
thymus, neonate N30.CNhs11132.1393-42G212.97
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.19
whole body, embryo E11.CNhs11014.324-5I89.03
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H214.34
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B113.83
whole body, embryo E16.CNhs10514.453-14F213.05
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.80
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.24
whole body, embryo E17.5.CNhs10513.490-9F910.42
whole body, embryo E17.CNhs10517.475-3I526.23
whole body, embryo E18.CNhs10516.493-3B311.46
whole body, neonate N00.CNhs10525.657-19C212.89
whole body, neonate N01.CNhs10576.659-23C69.37
whole body, neonate N06.CNhs10515.692-21D18.16
whole body, neonate N10.CNhs10518.761-6B45.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.32e-1023
neuroblast (sensu Vertebrata)7.32e-1023
neuron4.92e-0733
neuronal stem cell4.92e-0733
neuroblast4.92e-0733
electrically signaling cell4.92e-0733

Uber anatomy
Ontology termp-valuen
gray matter1.30e-1434
neural tube1.44e-1452
neural rod1.44e-1452
future spinal cord1.44e-1452
neural keel1.44e-1452
regional part of nervous system1.51e-1454
ecto-epithelium3.37e-1473
neurectoderm3.60e-1464
neural plate3.60e-1464
presumptive neural plate3.60e-1464
pre-chordal neural plate2.63e-1349
brain5.43e-1347
future brain5.43e-1347
anterior neural tube9.15e-1340
brain grey matter1.22e-1229
regional part of telencephalon1.22e-1229
telencephalon1.22e-1229
regional part of brain1.80e-1246
central nervous system1.87e-1273
regional part of forebrain2.75e-1239
forebrain2.75e-1239
future forebrain2.75e-1239
nervous system3.08e-1275
ectoderm-derived structure9.41e-1295
ectoderm9.41e-1295
presumptive ectoderm9.41e-1295
cerebral cortex2.99e-1021
cerebral hemisphere2.99e-1021
pallium2.99e-1021
structure with developmental contribution from neural crest3.18e-0892
regional part of cerebral cortex7.48e-0817
occipital lobe5.88e-0710
visual cortex5.88e-0710
neocortex5.88e-0710
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