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FFCP PHASE1:Mm9::chr4:20705999..20706023,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:20705999..20706023,-
|DHSsupport=NA
|short_description=p2@Nkain3
|DPIdataset=NA
|description=CAGE_peak_2_at_Nkain3_5end
|association_with_transcript=0bp_to_ENSMUST00000102998_5end
|EntrezGene=269513
|EntrezGene=269513
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q3URJ8
|UniProt=Q3URJ8
|association_with_transcript=0bp_to_ENSMUST00000102998_5end
|cluster_id=chr4:20705999..20706023,-
|description=CAGE_peak_2_at_Nkain3_5end
|id=chr4:20705999..20706023,-
|ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0000393!2.03e-12!39;CL:0000211!2.03e-12!39;CL:0000540!1.11e-10!33;CL:0000047!1.11e-10!33;CL:0000031!1.11e-10!33;CL:0000404!1.11e-10!33;CL:0000055!3.08e-08!50;CL:0002319!3.81e-07!43;CL:0000221!3.91e-07!44;CL:0000133!3.91e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-17,23;CL:0000337,1.13e-17,23;CL:0000393,1.71e-14,39;CL:0000211,1.71e-14,39;CL:0000540,2.87e-12,33;CL:0000047,2.87e-12,33;CL:0000031,2.87e-12,33;CL:0000404,2.87e-12,33;CL:0002319,1.55e-07,43;CL:0000221,3.40e-07,44;CL:0000133,3.40e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.23e-21!73;UBERON:0005743!9.23e-21!73;UBERON:0001049!1.88e-20!52;UBERON:0005068!1.88e-20!52;UBERON:0006241!1.88e-20!52;UBERON:0007135!1.88e-20!52;UBERON:0000073!1.12e-19!75;UBERON:0001016!1.12e-19!75;UBERON:0000955!1.36e-18!50;UBERON:0006238!1.36e-18!50;UBERON:0002346!2.62e-18!71;UBERON:0003075!2.62e-18!71;UBERON:0007284!2.62e-18!71;UBERON:0002616!2.66e-18!49;UBERON:0000033!1.95e-17!63;UBERON:0003056!3.17e-17!49;UBERON:0003080!3.88e-17!40;UBERON:0002020!6.81e-17!34;UBERON:0002780!2.07e-16!39;UBERON:0001890!2.07e-16!39;UBERON:0006240!2.07e-16!39;UBERON:0004121!4.07e-16!102;UBERON:0000924!4.07e-16!102;UBERON:0006601!4.07e-16!102;UBERON:0002791!5.44e-14!29;UBERON:0003528!5.44e-14!29;UBERON:0001893!5.44e-14!29;UBERON:0000956!1.59e-09!21;UBERON:0001869!1.59e-09!21;UBERON:0000203!1.59e-09!21;UBERON:0000025!9.63e-09!114;UBERON:0007811!4.27e-08!86;UBERON:0004111!5.69e-08!122;UBERON:0000153!1.52e-07!94;UBERON:0002619!1.62e-07!17;UBERON:0000468!8.04e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.06e-27,54;UBERON:0001049,5.33e-26,52;UBERON:0005068,5.33e-26,52;UBERON:0006241,5.33e-26,52;UBERON:0007135,5.33e-26,52;UBERON:0001017,5.00e-24,73;UBERON:0001016,6.92e-23,75;UBERON:0002020,1.15e-22,34;UBERON:0003080,1.62e-22,40;UBERON:0002346,4.13e-22,64;UBERON:0003075,4.13e-22,64;UBERON:0007284,4.13e-22,64;UBERON:0002780,1.76e-21,39;UBERON:0001890,1.76e-21,39;UBERON:0006240,1.76e-21,39;UBERON:0000955,2.75e-21,47;UBERON:0006238,2.75e-21,47;UBERON:0002616,7.19e-21,46;UBERON:0003056,3.40e-20,49;UBERON:0003528,1.77e-18,29;UBERON:0002791,1.77e-18,29;UBERON:0001893,1.77e-18,29;UBERON:0010371,2.46e-17,73;UBERON:0004121,2.76e-17,95;UBERON:0000924,2.76e-17,95;UBERON:0006601,2.76e-17,95;UBERON:0010314,3.45e-17,92;UBERON:0000956,4.52e-12,21;UBERON:0001869,4.52e-12,21;UBERON:0000203,4.52e-12,21;UBERON:0000025,9.10e-11,114;UBERON:0002619,3.28e-09,17;UBERON:0004111,5.54e-09,122;UBERON:0002420,8.70e-08,8;UBERON:0007245,8.70e-08,8;UBERON:0010009,8.70e-08,8;UBERON:0010011,8.70e-08,8;UBERON:0000454,8.70e-08,8;UBERON:0002021,3.17e-07,10;UBERON:0000411,3.17e-07,10;UBERON:0001950,3.17e-07,10
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.01376931219515,0.183546752161682,0,0.872100625521786,0,0.388859798148567,0.139986421625363,0,0,0,0,9.51859913333004,2.57880095944881,4.12537673821954,1.82084814773638,3.70293685490423,1.90149421051854,0,0.889294796111139,0,0,0,0,0.768436610643109,1.65903379693564,3.10513658162888,2.73422449756797,1.99955689082663,2.65042249141936,2.9397791811589,1.91690942036473,1.83843757322004,1.10115880999389,3.70293280447044,4.30098293117482,2.37395317914349,3.65950574409639,3.64639359389732,1.3959149950069,3.37657566019008,7.18151764551008,5.30331453852602,5.83723891276322,2.60959224155421,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.913396434936424,0.691846491768175,0.150722640552623,0.352766121407114,0,0,0.289198713839823,0,0.323533699894818,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,7.04016005202667,3.66000482254901,6.40837195775608,5.73620256634512,4.85859368927628,3.94797284663164,8.11206315338788,3.1570202793598,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,1.14951052216736,0.720248519221397,1.20563854268572,0.544291993210623,1.5373646434182,0.374806898238915,1.29351685369508,0,0.756424320671277,0.351902248327898,0.219195732427575,0.556094498451196,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,1.18372367792605,1.37734962223183,0.462801338662135,1.86027155800326,1.3413670069981,0.817357396570186,0.658239399653922,1.31333971263276,0.324275238183423,0,0.439100230582101,0.134206418760372,11.9865270681553,5.76265829323993,0,0,0.213288250535234,0.928946687441754,0.38660238396628,0.80673409849337,0.889512175379481,0.190225626112559,0,0.494096864172033,0.251335208800269,0,0,0,0.216138049874694,0,0.948339504765408,1.71372768914593,0,2.03651327845314,0.969762435838129,0.98190147846446,0.379419222745544,0,0.156998727841375,0,0,0.667380422864376,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0,0,0,0,0,0,0,0,0,0,3.05046120976805,3.16471553798949,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0.566153061577665,2.42886421004937,0.584511715822624,2.37172666767914,1.28528526568723,1.27746076687442,1.06839362200353,1.30309567482861,4.45419332025846,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0,0.363533729477506,1.06949213515416,0,1.05418608574999,0,0,0.36012218806262,0.258717367565509,1.92903331528433,4.96552654198366,5.70780216326626,4.27827453565514,1.2178597964584,0,0,0,0.65954501176592,0.161464426695906,0.301564624640779,0.596861720015682,0,0.291480836629851,4.82105785227325,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,1.21991680276109,1.08005340821801,1.25452977608681,0.655087691238533,1.21377911746339,0.41326727862668,0,0,0,0,0.747582730219894,0.165458490457098,0,0.645799117388655,0.337912250981556,1.05621514781179,0.5208175393758,0.209718688851422,0,0.288030006257865,0,0.608175645870493,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.965947970160952,1.12609485270709,5.49454872801795,0.857473516316263,0,5.64751842617067,5.06357760157895,7.44764167471216,2.92150409984269,2.05524755931193,1.5107877947794,0.675022500231806,3.60256962579376,2.71885445390523,2.07104124700728,0.415149390336707,0.798049746802062,1.02440163452481,0.486213434136588,1.04806581313991,0.919217542250071,2.00022055021454,1.44224540067226,1.60459604795908,1.01078884705519,1.01391719956096,1.69763707247469,1.77918864192777,1.40855335290712,1.7230640686684,1.42888107384922,1.62238056322798,1.92909220463705,1.23625770240992,1.76638704161277,1.71434626192708,1.59728225543404,1.43061713968393,2.76158191601424,1.12931256498397,1.77690676572521,2.0122077016005,1.8414879800649,1.7654534799962,0.561142271657738,1.06771516311757,0.985044823755635,2.45538625901814,1.85924209423159,0.771626443924566,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0.661774257358546,0.695603506861264
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.01376931219515,0.183546752161682,0,0.872100625521786,0,0.388859798148567,0.139986421625363,0,0,0,0,9.51859913333004,2.57880095944881,4.12537673821954,1.82084814773638,3.70293685490423,1.90149421051854,0,0.889294796111139,0,0,0,0,0.768436610643109,1.65903379693564,3.10513658162888,2.73422449756797,1.99955689082663,2.65042249141936,2.9397791811589,1.91690942036473,1.83843757322004,1.10115880999389,3.70293280447044,4.30098293117482,2.37395317914349,3.65950574409639,3.64639359389732,1.3959149950069,3.37657566019008,7.18151764551008,5.30331453852602,5.83723891276322,2.60959224155421,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.913396434936424,0.691846491768175,0.150722640552623,0.352766121407114,0,0,0.289198713839823,0,0.323533699894818,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,7.04016005202667,3.66000482254901,6.40837195775608,5.73620256634512,4.85859368927628,3.94797284663164,8.11206315338788,3.1570202793598,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,1.14951052216736,0.720248519221397,1.20563854268572,0.544291993210623,1.5373646434182,0.374806898238915,1.29351685369508,0,0.756424320671277,0.351902248327898,0.219195732427575,0.556094498451196,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,1.18372367792605,1.37734962223183,0.462801338662135,1.86027155800326,1.3413670069981,0.817357396570186,0.658239399653922,1.31333971263276,0.324275238183423,0,0.439100230582101,0.134206418760372,11.9865270681553,5.76265829323993,0,0,0.213288250535234,0.928946687441754,0.38660238396628,0.80673409849337,0.889512175379481,0.190225626112559,0,0.494096864172033,0.251335208800269,0,0,0,0.216138049874694,0,0.948339504765408,1.71372768914593,0,2.03651327845314,0.969762435838129,0.98190147846446,0.379419222745544,0,0.156998727841375,0,0,0.667380422864376,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0,0,0,0,0,0,0,0,0,0,3.05046120976805,3.16471553798949,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0.566153061577665,2.42886421004937,0.584511715822624,2.37172666767914,1.28528526568723,1.27746076687442,1.06839362200353,1.30309567482861,4.45419332025846,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0,0.363533729477506,1.06949213515416,0,1.05418608574999,0,0,0.36012218806262,0.258717367565509,1.92903331528433,4.96552654198366,5.70780216326626,4.27827453565514,1.2178597964584,0,0,0,0.65954501176592,0.161464426695906,0.301564624640779,0.596861720015682,0,0.291480836629851,4.82105785227325,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,1.21991680276109,1.08005340821801,1.25452977608681,0.655087691238533,1.21377911746339,0.41326727862668,0,0,0,0,0.747582730219894,0.165458490457098,0,0.645799117388655,0.337912250981556,1.05621514781179,0.5208175393758,0.209718688851422,0,0.288030006257865,0,0.608175645870493,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.965947970160952,1.12609485270709,5.49454872801795,0.857473516316263,0,5.64751842617067,5.06357760157895,7.44764167471216,2.92150409984269,2.05524755931193,1.5107877947794,0.675022500231806,3.60256962579376,2.71885445390523,2.07104124700728,0.415149390336707,0.798049746802062,1.02440163452481,0.486213434136588,1.04806581313991,0.919217542250071,2.00022055021454,1.44224540067226,1.60459604795908,1.01078884705519,1.01391719956096,1.69763707247469,1.77918864192777,1.40855335290712,1.7230640686684,1.42888107384922,1.62238056322798,1.92909220463705,1.23625770240992,1.76638704161277,1.71434626192708,1.59728225543404,1.43061713968393,2.76158191601424,1.12931256498397,1.77690676572521,2.0122077016005,1.8414879800649,1.7654534799962,0.561142271657738,1.06771516311757,0.985044823755635,2.45538625901814,1.85924209423159,0.771626443924566,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0.661774257358546,0.695603506861264
|short_description=p2@Nkain3
}}
}}

Latest revision as of 21:14, 26 September 2015

Short description:p2@Nkain3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nkain3_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000102998_5end
EntrezGene:Nkain3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nkain3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.52
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E811.99
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.13e-1723
neuroblast (sensu Vertebrata)1.13e-1723
electrically responsive cell1.71e-1439
electrically active cell1.71e-1439
neuron2.87e-1233
neuronal stem cell2.87e-1233
neuroblast2.87e-1233
electrically signaling cell2.87e-1233
neural cell1.55e-0743
ectodermal cell3.40e-0744
neurectodermal cell3.40e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.06e-2754
neural tube5.33e-2652
neural rod5.33e-2652
future spinal cord5.33e-2652
neural keel5.33e-2652
central nervous system5.00e-2473
nervous system6.92e-2375
gray matter1.15e-2234
anterior neural tube1.62e-2240
neurectoderm4.13e-2264
neural plate4.13e-2264
presumptive neural plate4.13e-2264
regional part of forebrain1.76e-2139
forebrain1.76e-2139
future forebrain1.76e-2139
brain2.75e-2147
future brain2.75e-2147
regional part of brain7.19e-2146
pre-chordal neural plate3.40e-2049
brain grey matter1.77e-1829
regional part of telencephalon1.77e-1829
telencephalon1.77e-1829
ecto-epithelium2.46e-1773
ectoderm-derived structure2.76e-1795
ectoderm2.76e-1795
presumptive ectoderm2.76e-1795
structure with developmental contribution from neural crest3.45e-1792
cerebral cortex4.52e-1221
cerebral hemisphere4.52e-1221
pallium4.52e-1221
tube9.10e-11114
regional part of cerebral cortex3.28e-0917
anatomical conduit5.54e-09122
basal ganglion8.70e-088
nuclear complex of neuraxis8.70e-088
aggregate regional part of brain8.70e-088
collection of basal ganglia8.70e-088
cerebral subcortex8.70e-088
occipital lobe3.17e-0710
visual cortex3.17e-0710
neocortex3.17e-0710
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