FFCP PHASE1:Mm9::chr12:81537394..81537443,-: Difference between revisions
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{{FFCP|EntrezGene=320808|HGNC=|MCL_coexpression_id=60|UniProt=Q80T85,Q3UV57|association_with_transcript=144bp_to_ENSMUST00000054145,NM_177267,uc007oar.2_5end|description=CAGE_peak_3_at_Dcaf5_5end|id=chr12:81537394..81537443,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.51e-17!63;UBERON:0001049!2.43e-15!52;UBERON:0005068!2.43e-15!52;UBERON:0006241!2.43e-15!52;UBERON:0007135!2.43e-15!52;UBERON:0000955!2.54e-15!50;UBERON:0006238!2.54e-15!50;UBERON:0002616!9.90e-15!49;UBERON:0002346!3.54e-13!71;UBERON:0003075!3.54e-13!71;UBERON:0007284!3.54e-13!71;UBERON:0003056!1.41e-12!49;UBERON:0003080!5.16e-12!40;UBERON:0002780!2.11e-11!39;UBERON:0001890!2.11e-11!39;UBERON:0006240!2.11e-11!39;UBERON:0001017!6.30e-11!73;UBERON:0005743!6.30e-11!73;UBERON:0004121!2.08e-10!102;UBERON:0000924!2.08e-10!102;UBERON:0006601!2.08e-10!102;UBERON:0002020!5.86e-10!34;UBERON:0000073!1.11e-09!75;UBERON:0001016!1.11e-09!75;UBERON:0002791!1.87e-08!29;UBERON:0003528!1.87e-08!29;UBERON:0001893!1.87e-08!29;UBERON:0004111!9.11e-08!122;UBERON:0002021!2.63e-07!10;UBERON:0000411!2.63e-07!10;UBERON:0001950!2.63e-07!10;UBERON:0007023!8.05e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.40e-16,54;UBERON:0001049,2.77e-15,52;UBERON:0005068,2.77e-15,52;UBERON:0006241,2.77e-15,52;UBERON:0007135,2.77e-15,52;UBERON:0002346,3.57e-14,64;UBERON:0003075,3.57e-14,64;UBERON:0007284,3.57e-14,64;UBERON:0000955,1.22e-13,47;UBERON:0006238,1.22e-13,47;UBERON:0010371,1.53e-13,73;UBERON:0010314,2.56e-13,92;UBERON:0002616,4.55e-13,46;UBERON:0003056,1.60e-12,49;UBERON:0003080,5.93e-12,40;UBERON:0002780,2.42e-11,39;UBERON:0001890,2.42e-11,39;UBERON:0006240,2.42e-11,39;UBERON:0001017,6.41e-11,73;UBERON:0004121,7.79e-11,95;UBERON:0000924,7.79e-11,95;UBERON:0006601,7.79e-11,95;UBERON:0002020,6.74e-10,34;UBERON:0001016,1.19e-09,75;UBERON:0003528,2.15e-08,29;UBERON:0002791,2.15e-08,29;UBERON:0001893,2.15e-08,29;UBERON:0004111,8.50e-08,122;UBERON:0002021,2.58e-07,10;UBERON:0000411,2.58e-07,10;UBERON:0001950,2.58e-07,10;UBERON:0007023,8.91e-07,51|phase1_expression=4.80446541314382,6.97950815278722,5.91499011206397,8.16653370528441,4.50806156951712,4.36486106970913,3.03696432774183,1.67860320474049,0.703943610758334,0.70219357896598,0.171217968225505,0.239316476986009,2.22560948910567,1.04904482902797,0.999329285446988,0.607425802169478,1.39912375625629,1.73504190947031,2.19383093769182,1.27316895539409,11.9911039113008,0.595745707205312,0.261199789138935,2.71987118748791,3.21172993494038,4.01962374880514,4.30761996159075,3.23206849028834,4.3705386474966,2.77233142735924,3.54768817048488,3.17515336729816,1.23012957516914,0,4.33277429626912,2.82598897109437,4.08338712524738,0.837063261473815,0,0,1.76469446409304,0.683045484958446,0,1.38486499773135,1.11514624341466,1.28482726513177,1.56478268869608,1.96222640742402,0.878744730937887,4.86074747685709,1.67983705950435,0,1.34226084846189,2.17608642603403,1.34437519656986,1.02903774414379,1.71920063963254,1.03134418455488,6.87875966922632,4.7609188134483,8.87363964908651,0.338844532069132,1.77858959222228,0.899899717281399,0,0.7104801149461,0.898800331555214,2.68952813725088,2.69592992002042,2.70011876663381,3.57552434297349,8.56952953211411,3.3130281142742,2.32732518508413,1.91690942036473,1.83843757322004,11.0115880999389,10.3426743849002,6.75868746327471,8.04506355154182,7.22752384459036,6.25096044668112,7.81712397203867,6.75315132038016,12.3766580699216,5.89257170947335,7.54569908235246,5.21918448310842,0.530083353332288,0.755715601067855,1.73918693221007,0.860423876981386,0,0.539703191637817,1.29955283489534,1.79210754838934,2.80888840263504,1.36344258062446,1.55871602761721,1.7666978725517,3.52108549441701,2.56652954828636,2.54805239706646,0,1.08245520505607,0.253359865475099,1.01104889002957,4.5673551887624,1.55362730188303,4.00793775475027,2.25530924795977,1.21786191324856,3.45923245884088,1.95939432718409,3.05730638552832,4.14699751387929,3.21353458054686,4.33798070759735,0.884610551949874,2.75003644910596,1.76673214768315,2.42437626567611,5.59175283654366,11.1256702864388,11.7290155815535,5.8755122697976,0.838705871541442,0.599902730993408,1.01656181658452,12.8819949888148,5.03250663100489,3.76963056338593,12.6891753740362,15.5986428971502,9.55825004973976,8.76102820565891,3.56437773476107,2.98576729464223,6.57079171927554,5.26104639716185,2.08192708740326,3.67843367093557,2.16074555766419,3.31550599238573,3.94611695077702,4.61209393025459,4.31027932974753,8.79591460512653,3.88022387279116,3.59301552318857,3.87092473160687,2.41115305670332,3.05851974148158,4.52727816478817,2.67516777330327,2.38841120182192,1.40442637462647,0,0.852490498186778,3.52113813310353,1.64168241986767,2.16074473753218,2.84093682702252,2.75469924446365,3.23960937063494,2.79040733700489,2.41446061259657,5.48797109125697,5.10135534731789,6.40253109908471,6.72871119230603,6.87139940899062,4.61055242111206,4.2946054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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320808 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q80T85,Q3UV57 | |||
|association_with_transcript=144bp_to_ENSMUST00000054145,NM_177267,uc007oar.2_5end | |||
|cluster_id=chr12:81537394..81537443,- | |||
|description=CAGE_peak_3_at_Dcaf5_5end | |||
|id=chr12:81537394..81537443,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.51e-17!63;UBERON:0001049!2.43e-15!52;UBERON:0005068!2.43e-15!52;UBERON:0006241!2.43e-15!52;UBERON:0007135!2.43e-15!52;UBERON:0000955!2.54e-15!50;UBERON:0006238!2.54e-15!50;UBERON:0002616!9.90e-15!49;UBERON:0002346!3.54e-13!71;UBERON:0003075!3.54e-13!71;UBERON:0007284!3.54e-13!71;UBERON:0003056!1.41e-12!49;UBERON:0003080!5.16e-12!40;UBERON:0002780!2.11e-11!39;UBERON:0001890!2.11e-11!39;UBERON:0006240!2.11e-11!39;UBERON:0001017!6.30e-11!73;UBERON:0005743!6.30e-11!73;UBERON:0004121!2.08e-10!102;UBERON:0000924!2.08e-10!102;UBERON:0006601!2.08e-10!102;UBERON:0002020!5.86e-10!34;UBERON:0000073!1.11e-09!75;UBERON:0001016!1.11e-09!75;UBERON:0002791!1.87e-08!29;UBERON:0003528!1.87e-08!29;UBERON:0001893!1.87e-08!29;UBERON:0004111!9.11e-08!122;UBERON:0002021!2.63e-07!10;UBERON:0000411!2.63e-07!10;UBERON:0001950!2.63e-07!10;UBERON:0007023!8.05e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.40e-16,54;UBERON:0001049,2.77e-15,52;UBERON:0005068,2.77e-15,52;UBERON:0006241,2.77e-15,52;UBERON:0007135,2.77e-15,52;UBERON:0002346,3.57e-14,64;UBERON:0003075,3.57e-14,64;UBERON:0007284,3.57e-14,64;UBERON:0000955,1.22e-13,47;UBERON:0006238,1.22e-13,47;UBERON:0010371,1.53e-13,73;UBERON:0010314,2.56e-13,92;UBERON:0002616,4.55e-13,46;UBERON:0003056,1.60e-12,49;UBERON:0003080,5.93e-12,40;UBERON:0002780,2.42e-11,39;UBERON:0001890,2.42e-11,39;UBERON:0006240,2.42e-11,39;UBERON:0001017,6.41e-11,73;UBERON:0004121,7.79e-11,95;UBERON:0000924,7.79e-11,95;UBERON:0006601,7.79e-11,95;UBERON:0002020,6.74e-10,34;UBERON:0001016,1.19e-09,75;UBERON:0003528,2.15e-08,29;UBERON:0002791,2.15e-08,29;UBERON:0001893,2.15e-08,29;UBERON:0004111,8.50e-08,122;UBERON:0002021,2.58e-07,10;UBERON:0000411,2.58e-07,10;UBERON:0001950,2.58e-07,10;UBERON:0007023,8.91e-07,51 | |||
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| |||
|short_description=p3@Dcaf5 | |||
}} |
Latest revision as of 20:58, 26 September 2015
Short description: | p3@Dcaf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dcaf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 144bp_to_ENSMUST00000054145, NM_177267, uc007oar.2_5end |
EntrezGene: | Dcaf5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.40e-16 | 54 |
neural tube | 2.77e-15 | 52 |
neural rod | 2.77e-15 | 52 |
future spinal cord | 2.77e-15 | 52 |
neural keel | 2.77e-15 | 52 |
neurectoderm | 3.57e-14 | 64 |
neural plate | 3.57e-14 | 64 |
presumptive neural plate | 3.57e-14 | 64 |
brain | 1.22e-13 | 47 |
future brain | 1.22e-13 | 47 |
ecto-epithelium | 1.53e-13 | 73 |
structure with developmental contribution from neural crest | 2.56e-13 | 92 |
regional part of brain | 4.55e-13 | 46 |
pre-chordal neural plate | 1.60e-12 | 49 |
anterior neural tube | 5.93e-12 | 40 |
regional part of forebrain | 2.42e-11 | 39 |
forebrain | 2.42e-11 | 39 |
future forebrain | 2.42e-11 | 39 |
central nervous system | 6.41e-11 | 73 |
ectoderm-derived structure | 7.79e-11 | 95 |
ectoderm | 7.79e-11 | 95 |
presumptive ectoderm | 7.79e-11 | 95 |
gray matter | 6.74e-10 | 34 |
nervous system | 1.19e-09 | 75 |
brain grey matter | 2.15e-08 | 29 |
regional part of telencephalon | 2.15e-08 | 29 |
telencephalon | 2.15e-08 | 29 |
anatomical conduit | 8.50e-08 | 122 |
occipital lobe | 2.58e-07 | 10 |
visual cortex | 2.58e-07 | 10 |
neocortex | 2.58e-07 | 10 |
adult organism | 8.91e-07 | 51 |