FFCP PHASE1:Mm9::chr17:73553484..73553556,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225010 | |EntrezGene=225010 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |MCL_coexpression_id=10 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000134149_5end | |association_with_transcript=0bp_to_ENSMUST00000134149_5end | ||
|cluster_id=chr17:73553484..73553556,+ | |||
|description=CAGE_peak_2_at_Lclat1_5end | |description=CAGE_peak_2_at_Lclat1_5end | ||
|id=chr17:73553484..73553556,+ | |id=chr17:73553484..73553556,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.83e-18!18;UBERON:0000948!5.83e-18!18;UBERON:0005498!5.83e-18!18;UBERON:0004140!5.83e-18!18;UBERON:0009881!5.83e-18!18;UBERON:0004141!5.83e-18!18;UBERON:0003084!5.83e-18!18;UBERON:0007005!5.83e-18!18;UBERON:0004139!5.83e-18!18;UBERON:0004291!5.83e-18!18;UBERON:0004535!1.19e-12!23;UBERON:0001009!1.19e-12!23;UBERON:0004872!8.73e-12!33;UBERON:0003103!4.79e-09!43;UBERON:0002048!1.29e-08!14;UBERON:0000117!1.29e-08!14;UBERON:0000171!1.29e-08!14;UBERON:0000170!1.29e-08!14;UBERON:0005597!1.29e-08!14;UBERON:0000118!1.29e-08!14;UBERON:0003914!4.16e-07!47 | |ontology_enrichment_uberon=UBERON:0007100!5.83e-18!18;UBERON:0000948!5.83e-18!18;UBERON:0005498!5.83e-18!18;UBERON:0004140!5.83e-18!18;UBERON:0009881!5.83e-18!18;UBERON:0004141!5.83e-18!18;UBERON:0003084!5.83e-18!18;UBERON:0007005!5.83e-18!18;UBERON:0004139!5.83e-18!18;UBERON:0004291!5.83e-18!18;UBERON:0004535!1.19e-12!23;UBERON:0001009!1.19e-12!23;UBERON:0004872!8.73e-12!33;UBERON:0003103!4.79e-09!43;UBERON:0002048!1.29e-08!14;UBERON:0000117!1.29e-08!14;UBERON:0000171!1.29e-08!14;UBERON:0000170!1.29e-08!14;UBERON:0005597!1.29e-08!14;UBERON:0000118!1.29e-08!14;UBERON:0003914!4.16e-07!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.43e-44,18;UBERON:0000948,2.43e-44,18;UBERON:0005498,2.43e-44,18;UBERON:0004140,2.43e-44,18;UBERON:0009881,2.43e-44,18;UBERON:0004141,2.43e-44,18;UBERON:0003084,2.43e-44,18;UBERON:0007005,2.43e-44,18;UBERON:0004139,2.43e-44,18;UBERON:0004291,2.43e-44,18;UBERON:0004535,5.37e-34,23;UBERON:0001009,5.37e-34,23;UBERON:0004872,1.06e-22,33;UBERON:0002048,5.12e-21,14;UBERON:0000117,5.12e-21,14;UBERON:0000171,5.12e-21,14;UBERON:0000170,5.12e-21,14;UBERON:0005597,5.12e-21,14;UBERON:0000118,5.12e-21,14;UBERON:0005153,5.32e-17,17;UBERON:0005178,5.32e-17,17;UBERON:0005181,5.32e-17,17;UBERON:0002224,5.32e-17,17;UBERON:0000915,5.32e-17,17;UBERON:0008947,5.32e-17,17;UBERON:0003258,5.32e-17,17;UBERON:0003103,1.18e-16,43;UBERON:0003914,5.91e-15,47;UBERON:0000025,6.47e-15,114;UBERON:0005157,3.46e-14,20;UBERON:0004111,1.26e-13,122;UBERON:0001048,5.66e-12,134;UBERON:0000483,4.29e-08,174;UBERON:0000119,6.04e-08,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71920063963254,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0,0,0,2.48550927042602,2.57978665979206,4.14142741360334,8.75955521665278,11.215561209602,19.1291219980349,44.6465173920783,47.7526654491322,47.6402596858052,49.6970746738711,127.886454517615,73.9347543058204,54.3863953222236,60.1567315897479,38.5172421842267,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.814605311381257,0,0.140271639780637,0.189709611372772,0.442830443938806,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0,0.252578877947112,0,0,12.3784637411625,0,0.162964976442026,0,0,3.51763140627813,12.6163129669587,7.41507861859636,7.88175720530955,6.42247599981447,4.62418829106713,12.1258852889646,15.3689633860647,15.1881511510587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,0,0.512612642393558,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.39736270956253,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0.551530525350042,0.888986911206461,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.943131706930381,0.561849044819294,0.448176066834085,0.516919220600519,0,0.811190281613988,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.532427418478012,0.715308569841963,0.726732083161643,0.658765662907314,0.507687647350059,0.365855945745545,0,0.271608227691724,0,0.355905054372522,0.591026894253381,0,0.619747364743864,0.771626443924566,0,0.935726433781634,0.644613162144895,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71920063963254,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0,0,0,2.48550927042602,2.57978665979206,4.14142741360334,8.75955521665278,11.215561209602,19.1291219980349,44.6465173920783,47.7526654491322,47.6402596858052,49.6970746738711,127.886454517615,73.9347543058204,54.3863953222236,60.1567315897479,38.5172421842267,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.814605311381257,0,0.140271639780637,0.189709611372772,0.442830443938806,0.156998727841375,0.493588655687202,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0,0.252578877947112,0,0,12.3784637411625,0,0.162964976442026,0,0,3.51763140627813,12.6163129669587,7.41507861859636,7.88175720530955,6.42247599981447,4.62418829106713,12.1258852889646,15.3689633860647,15.1881511510587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,0,0.512612642393558,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.39736270956253,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0.551530525350042,0.888986911206461,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.943131706930381,0.561849044819294,0.448176066834085,0.516919220600519,0,0.811190281613988,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.532427418478012,0.715308569841963,0.726732083161643,0.658765662907314,0.507687647350059,0.365855945745545,0,0.271608227691724,0,0.355905054372522,0.591026894253381,0,0.619747364743864,0.771626443924566,0,0.935726433781634,0.644613162144895,0,0,0 | ||
|short_description=p2@Lclat1 | |short_description=p2@Lclat1 | ||
}} | }} |
Latest revision as of 20:56, 26 September 2015
Short description: | p2@Lclat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lclat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 0bp_to_ENSMUST00000134149_5end |
EntrezGene: | Lclat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.43e-44 | 18 |
heart | 2.43e-44 | 18 |
primitive heart tube | 2.43e-44 | 18 |
primary heart field | 2.43e-44 | 18 |
anterior lateral plate mesoderm | 2.43e-44 | 18 |
heart tube | 2.43e-44 | 18 |
heart primordium | 2.43e-44 | 18 |
cardiac mesoderm | 2.43e-44 | 18 |
cardiogenic plate | 2.43e-44 | 18 |
heart rudiment | 2.43e-44 | 18 |
cardiovascular system | 5.37e-34 | 23 |
circulatory system | 5.37e-34 | 23 |
splanchnic layer of lateral plate mesoderm | 1.06e-22 | 33 |
lung | 5.12e-21 | 14 |
respiratory tube | 5.12e-21 | 14 |
respiration organ | 5.12e-21 | 14 |
pair of lungs | 5.12e-21 | 14 |
lung primordium | 5.12e-21 | 14 |
lung bud | 5.12e-21 | 14 |
epithelial bud | 5.32e-17 | 17 |
thoracic cavity element | 5.32e-17 | 17 |
thoracic segment organ | 5.32e-17 | 17 |
thoracic cavity | 5.32e-17 | 17 |
thoracic segment of trunk | 5.32e-17 | 17 |
respiratory primordium | 5.32e-17 | 17 |
endoderm of foregut | 5.32e-17 | 17 |
compound organ | 1.18e-16 | 43 |
epithelial tube | 5.91e-15 | 47 |
tube | 6.47e-15 | 114 |
epithelial fold | 3.46e-14 | 20 |
anatomical conduit | 1.26e-13 | 122 |
primordium | 5.66e-12 | 134 |
epithelium | 4.29e-08 | 174 |
cell layer | 6.04e-08 | 176 |