FFCP PHASE1:Mm9::chr1:175843121..175843130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381308 | |EntrezGene=381308 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=Q08619 | |UniProt=Q08619 | ||
|association_with_transcript=-68bp_to_ENSMUST00000009340,NM_001033450_5end | |association_with_transcript=-68bp_to_ENSMUST00000009340,NM_001033450_5end | ||
|cluster_id=chr1:175843121..175843130,- | |||
|description=CAGE_peak_4_at_Mnda_5end | |description=CAGE_peak_4_at_Mnda_5end | ||
|id=chr1:175843121..175843130,- | |id=chr1:175843121..175843130,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.92e-24,6;CL:0000187,1.92e-24,6;CL:0000056,1.92e-24,6;CL:0000222,5.83e-21,7;CL:0002494,3.06e-18,3;CL:0000737,3.06e-18,3;CL:0000746,3.06e-18,3;CL:0000513,3.06e-18,3;CL:0000355,2.62e-16,9;CL:0002476,1.38e-13,2;CL:0000192,8.49e-09,3;CL:0000359,8.49e-09,3;CL:0002539,8.49e-09,3;CL:0000514,8.49e-09,3;CL:0002194,3.21e-07,4;CL:0000766,3.21e-07,4;CL:0000234,3.21e-07,4;CL:0000576,3.21e-07,4;CL:0000235,3.21e-07,4;CL:0000864,3.21e-07,4;CL:0002009,3.21e-07,4;CL:0000040,3.21e-07,4;CL:0000559,3.21e-07,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.70e-10!193;UBERON:0004120!6.70e-10!193;UBERON:0006603!6.70e-10!193;UBERON:0003104!1.87e-08!131;UBERON:0009142!1.87e-08!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.62e-16,9;UBERON:0002036,2.62e-16,9;UBERON:0002385,2.62e-16,9;UBERON:0000486,2.62e-16,9;UBERON:0007503,2.62e-16,9;UBERON:0001015,2.62e-16,9;UBERON:0002329,2.62e-16,9;UBERON:0003082,2.62e-16,9;UBERON:0003059,2.62e-16,9;UBERON:0007282,2.62e-16,9;UBERON:0004290,2.62e-16,9;UBERON:0009618,2.62e-16,9;UBERON:0000383,1.12e-14,10;UBERON:0007524,2.43e-13,11;UBERON:0003077,2.43e-13,11;UBERON:0007285,2.43e-13,11;UBERON:0001135,8.49e-09,3;UBERON:0004237,8.49e-09,3;UBERON:0004695,8.49e-09,3;UBERON:0002111,8.49e-09,3;UBERON:0004178,8.49e-09,3;UBERON:0002204,1.32e-08,32;UBERON:0000947,8.32e-07,4;UBERON:0001637,8.32e-07,4;UBERON:0004573,8.32e-07,4;UBERON:0003509,8.32e-07,4;UBERON:0004571,8.32e-07,4;UBERON:0010191,8.32e-07,4;UBERON:0004572,8.32e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.4192770370732,0,0,0,0,0,0,0,0,0,0,2.31533492432352,2.29226751951005,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,0.899899717281399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,1.28471652181535,0.579728977403356,0.860423876981386,0,0,0,0,0.140444420131752,4.77204903218562,2.59786004602869,1.41335829804136,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.776813650941515,0.593768556259299,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.578397427679647,0,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.497627882440372,0.252722758433675,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.246794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.810676133875177,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0.44292937929755,0.159454768657487,0.163863314715738,0,0.144649058581512,7.53956419696361,5.98296252200581,0.491764273019036,0.275936746304732,0,0.117211686592203,0.491804836130026,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,1.15420377059036,0.161464426695906,0.241251699712623,0.119372344003136,0.492422699235184,0.582961673259701,0,0.170870880797853,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0.632022241256357,0,0.616265742988964,0.389762468933385,0,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0,0.302478555410522,0.682205165178267,0.577271049841977,0.350630706544707,0.453460767230423,0,0,0,0.19318959403219,0.93841237725591,2.01466786693992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.4192770370732,0,0,0,0,0,0,0,0,0,0,2.31533492432352,2.29226751951005,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,0.899899717281399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,1.28471652181535,0.579728977403356,0.860423876981386,0,0,0,0,0.140444420131752,4.77204903218562,2.59786004602869,1.41335829804136,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.776813650941515,0.593768556259299,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.578397427679647,0,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.497627882440372,0.252722758433675,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.246794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.810676133875177,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0.44292937929755,0.159454768657487,0.163863314715738,0,0.144649058581512,7.53956419696361,5.98296252200581,0.491764273019036,0.275936746304732,0,0.117211686592203,0.491804836130026,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,1.15420377059036,0.161464426695906,0.241251699712623,0.119372344003136,0.492422699235184,0.582961673259701,0,0.170870880797853,0,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0.632022241256357,0,0.616265742988964,0.389762468933385,0,0.198681354781265,0.120195449519969,0.147689527174577,0.504832249740738,0,0.302478555410522,0.682205165178267,0.577271049841977,0.350630706544707,0.453460767230423,0,0,0,0.19318959403219,0.93841237725591,2.01466786693992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p4@Mnda | |short_description=p4@Mnda | ||
}} | }} |
Latest revision as of 20:50, 26 September 2015
Short description: | p4@Mnda |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mnda_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | -68bp_to_ENSMUST00000009340, NM_001033450_5end |
EntrezGene: | Mnda |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.92e-24 | 6 |
muscle cell | 1.92e-24 | 6 |
myoblast | 1.92e-24 | 6 |
mesodermal cell | 5.83e-21 | 7 |
cardiocyte | 3.06e-18 | 3 |
striated muscle cell | 3.06e-18 | 3 |
cardiac muscle cell | 3.06e-18 | 3 |
cardiac muscle myoblast | 3.06e-18 | 3 |
multi-potent skeletal muscle stem cell | 2.62e-16 | 9 |
bone marrow macrophage | 1.38e-13 | 2 |
smooth muscle cell | 8.49e-09 | 3 |
vascular associated smooth muscle cell | 8.49e-09 | 3 |
aortic smooth muscle cell | 8.49e-09 | 3 |
smooth muscle myoblast | 8.49e-09 | 3 |
monopoietic cell | 3.21e-07 | 4 |
myeloid leukocyte | 3.21e-07 | 4 |
phagocyte | 3.21e-07 | 4 |
monocyte | 3.21e-07 | 4 |
macrophage | 3.21e-07 | 4 |
tissue-resident macrophage | 3.21e-07 | 4 |
macrophage dendritic cell progenitor | 3.21e-07 | 4 |
monoblast | 3.21e-07 | 4 |
promonocyte | 3.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.62e-16 | 9 |
striated muscle tissue | 2.62e-16 | 9 |
muscle tissue | 2.62e-16 | 9 |
multilaminar epithelium | 2.62e-16 | 9 |
epithelial vesicle | 2.62e-16 | 9 |
musculature | 2.62e-16 | 9 |
somite | 2.62e-16 | 9 |
myotome | 2.62e-16 | 9 |
presomitic mesoderm | 2.62e-16 | 9 |
presumptive segmental plate | 2.62e-16 | 9 |
dermomyotome | 2.62e-16 | 9 |
trunk paraxial mesoderm | 2.62e-16 | 9 |
musculature of body | 1.12e-14 | 10 |
dense mesenchyme tissue | 2.43e-13 | 11 |
paraxial mesoderm | 2.43e-13 | 11 |
presumptive paraxial mesoderm | 2.43e-13 | 11 |
smooth muscle tissue | 8.49e-09 | 3 |
blood vessel smooth muscle | 8.49e-09 | 3 |
arterial system smooth muscle | 8.49e-09 | 3 |
artery smooth muscle tissue | 8.49e-09 | 3 |
aorta smooth muscle tissue | 8.49e-09 | 3 |
musculoskeletal system | 1.32e-08 | 32 |
aorta | 8.32e-07 | 4 |
artery | 8.32e-07 | 4 |
systemic artery | 8.32e-07 | 4 |
arterial blood vessel | 8.32e-07 | 4 |
systemic arterial system | 8.32e-07 | 4 |
aortic system | 8.32e-07 | 4 |
arterial system | 8.32e-07 | 4 |