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FFCP PHASE1:Mm9::chr7:52184780..52184891,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11771
|EntrezGene=11771
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=P17426,E9PWD0
|UniProt=P17426,E9PWD0
|association_with_transcript=0bp_to_ENSMUST00000085399,ENSMUST00000107857,ENSMUST00000166060,ENSMUST00000166972,ENSMUST00000167930,ENSMUST00000168862,NM_001077264,NM_007458,uc009grv.1,uc009grw.1_5end
|association_with_transcript=0bp_to_ENSMUST00000085399,ENSMUST00000107857,ENSMUST00000166060,ENSMUST00000166972,ENSMUST00000167930,ENSMUST00000168862,NM_001077264,NM_007458,uc009grv.1,uc009grw.1_5end
|cluster_id=chr7:52184780..52184891,-
|description=CAGE_peak_1_at_Ap2a1_5end
|description=CAGE_peak_1_at_Ap2a1_5end
|id=chr7:52184780..52184891,-
|id=chr7:52184780..52184891,-
|ontology_enrichment_celltype=CL:0000117!3.88e-11!23;CL:0000337!3.88e-11!23;CL:0002319!1.16e-10!43;CL:0000055!4.22e-10!50;CL:0000221!5.12e-10!44;CL:0000133!5.12e-10!44;CL:0000393!3.00e-07!39;CL:0000211!3.00e-07!39;CL:0000540!6.55e-07!33;CL:0000047!6.55e-07!33;CL:0000031!6.55e-07!33;CL:0000404!6.55e-07!33
|ontology_enrichment_celltype=CL:0000117!3.88e-11!23;CL:0000337!3.88e-11!23;CL:0002319!1.16e-10!43;CL:0000055!4.22e-10!50;CL:0000221!5.12e-10!44;CL:0000133!5.12e-10!44;CL:0000393!3.00e-07!39;CL:0000211!3.00e-07!39;CL:0000540!6.55e-07!33;CL:0000047!6.55e-07!33;CL:0000031!6.55e-07!33;CL:0000404!6.55e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.88e-11,23;CL:0000337,3.88e-11,23;CL:0002319,1.16e-10,43;CL:0000221,5.12e-10,44;CL:0000133,5.12e-10,44;CL:0000393,3.00e-07,39;CL:0000211,3.00e-07,39;CL:0000540,6.55e-07,33;CL:0000047,6.55e-07,33;CL:0000031,6.55e-07,33;CL:0000404,6.55e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.26e-25!75;UBERON:0001016!2.26e-25!75;UBERON:0001017!6.17e-25!73;UBERON:0005743!6.17e-25!73;UBERON:0001049!9.34e-24!52;UBERON:0005068!9.34e-24!52;UBERON:0006241!9.34e-24!52;UBERON:0007135!9.34e-24!52;UBERON:0000955!5.64e-23!50;UBERON:0006238!5.64e-23!50;UBERON:0002616!2.37e-22!49;UBERON:0002346!3.40e-20!71;UBERON:0003075!3.40e-20!71;UBERON:0007284!3.40e-20!71;UBERON:0004121!1.22e-19!102;UBERON:0000924!1.22e-19!102;UBERON:0006601!1.22e-19!102;UBERON:0000033!1.39e-18!63;UBERON:0002020!1.69e-17!34;UBERON:0003080!9.13e-17!40;UBERON:0002780!4.15e-16!39;UBERON:0001890!4.15e-16!39;UBERON:0006240!4.15e-16!39;UBERON:0003056!3.06e-15!49;UBERON:0002791!7.25e-15!29;UBERON:0003528!7.25e-15!29;UBERON:0001893!7.25e-15!29;UBERON:0000025!2.66e-11!114;UBERON:0000956!6.05e-11!21;UBERON:0001869!6.05e-11!21;UBERON:0000203!6.05e-11!21;UBERON:0004111!9.92e-10!122;UBERON:0002619!1.49e-09!17;UBERON:0003076!1.12e-07!12;UBERON:0003057!1.12e-07!12;UBERON:0002021!3.06e-07!10;UBERON:0000411!3.06e-07!10;UBERON:0001950!3.06e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.26e-25,75;UBERON:0000073,3.21e-25,54;UBERON:0001017,6.17e-25,73;UBERON:0001049,9.34e-24,52;UBERON:0005068,9.34e-24,52;UBERON:0006241,9.34e-24,52;UBERON:0007135,9.34e-24,52;UBERON:0002346,5.77e-21,64;UBERON:0003075,5.77e-21,64;UBERON:0007284,5.77e-21,64;UBERON:0000955,6.87e-21,47;UBERON:0006238,6.87e-21,47;UBERON:0002616,2.80e-20,46;UBERON:0004121,7.86e-20,95;UBERON:0000924,7.86e-20,95;UBERON:0006601,7.86e-20,95;UBERON:0010314,3.36e-19,92;UBERON:0002020,1.69e-17,34;UBERON:0003080,9.13e-17,40;UBERON:0002780,4.15e-16,39;UBERON:0001890,4.15e-16,39;UBERON:0006240,4.15e-16,39;UBERON:0010371,7.32e-16,73;UBERON:0003056,3.06e-15,49;UBERON:0003528,7.25e-15,29;UBERON:0002791,7.25e-15,29;UBERON:0001893,7.25e-15,29;UBERON:0000025,2.66e-11,114;UBERON:0000956,6.05e-11,21;UBERON:0001869,6.05e-11,21;UBERON:0000203,6.05e-11,21;UBERON:0004111,9.92e-10,122;UBERON:0002619,1.49e-09,17;UBERON:0003076,1.12e-07,12;UBERON:0003057,1.12e-07,12;UBERON:0002021,3.06e-07,10;UBERON:0000411,3.06e-07,10;UBERON:0001950,3.06e-07,10
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0311206155,39.8506155568623,36.2897945161252,36.1722752105031,35.8114604543731,41.9428117256792,42.318569331372,42.4044626014128,40.8287165869148,26.7175904627378,356.817630187093,39.9209177937423,43.8464999711309,62.8077338351274,49.0807329215378,46.2939783844732,44.2436789694492,47.7850092377297,52.219953524004,74.8910774560619,190.387834136449,30.0210564596769,44.1940969332558,34.7163035217116,24.2951938968477,35.6263124378288,33.1797862484712,31.9719895723117,35.7408655762477,30.794767234185,40.3896075271499,33.7767720208416,38.203489249983,32.9044498409927,34.8293168501075,56.2291351365724,32.1879632392394,27.9010094055469,35.4236540528206,44.2404170333716,48.6097611418561,36.2640216049185,44.8029912275248,37.6179078026523,134.410938542862,145.462774736268,142.65098284641,161.541991403066,141.812081592523,132.193932043198,137.029567547057,143.652463828526,125.520447288625,128.404557314451,48.4686913218105,57.8586066431495,49.683479274453,53.9696911891613,56.5955539095552,51.843869382904,47.1163062939424,51.0966941952458,54.8771848402004,47.7597730233577,45.1193153804627,47.3452116879051,46.5398292125316,49.6835182661786,48.9350195501825,48.1056628195904,53.6544429124681,50.1563973205633,39.9723323779207,41.6572943980344,41.8300487910207,46.6761370199058,44.3491313302017,44.0399642395955,42.4433305673141,46.284190516747,41.1587938963738,49.9832451731901,48.6178727568185,42.0856703743304,48.6403574309114,54.5714832360622,43.7877216191568,48.1853576088354,47.0692130793985,81.1884378298324,50.997090641099,54.5772477282678,52.0304263227254,52.7213491695642,36.1713823567857
|phase1_expression=29.4673878672821,46.0647538083957,53.2349110085757,61.4002348952865,76.1361509518448,29.0431140407569,31.0704811992049,29.0527477743547,17.8801677132617,23.8745816848433,29.4494905347869,31.1111420081812,29.104124088305,27.3625859571462,66.2888426013169,53.2509953235242,67.1579403003021,24.6060488979425,25.7775135178789,30.9804445812562,92.7822295548171,35.9433243347205,23.5079810225042,32.3184694042681,28.9055694144634,39.0477735598214,36.6147696735214,34.2599259970564,33.8241686632346,29.4875251819119,28.8249663851896,78.7438035089943,101.485689951454,31.6963362030877,15.8868390863201,20.1143920883776,20.8252743387616,41.016099812217,29.6907430919044,35.0760908462445,33.5291948177678,37.5675016727145,31.558172947025,44.4415767453788,43.1865726995132,48.2727958185222,157.260660213956,89.3903141159831,107.206857174422,101.68683721585,83.7118801319668,84.8140129753332,16.9460432118314,18.1340535502836,26.2153163331122,55.8252976198005,67.3353583856078,55.1769138736863,84.9729135610311,95.7473672482379,90.6378907013836,102.331048684878,72.9221732811134,88.6401221522178,83.0647744556259,103.730096782131,100.066436913147,111.039090237929,66.7761103266596,63.4527910158946,62.8871634440632,126.257735106481,108.888190689145,59.4080376192527,62.7787835169448,67.1029714225315,144.251804109199,158.332299225633,153.913746322756,88.2319264914997,90.9387177407952,76.0533521012869,156.621662439775,114.803572446463,113.52909809817,124.627891655361,102.222866813756,94.1317201417768,51.7967162398979,59.7015324843606,42.0303508617433,19.7897491705719,26.5188820146023,37.2395202230094,33.1385972898311,20.6092368064774,43.8186590811066,43.8005929025608,35.0711106213873,36.0406366000547,34.36579442551,39.7812079984385,25.4805239706646,28.4426681261332,31.8241830286485,27.8695852022608,26.7927955857835,32.1998540807749,24.081223179187,54.0329386195962,52.0455980298408,42.0162360070755,53.2721798661495,36.9270469353925,42.0967571545823,50.6436363058592,48.2030187082029,39.1864257252961,45.1151381494436,56.2948637816984,57.6396363181627,51.3967768323335,37.2783522436244,102.473278954042,95.5076983069355,45.7268128823379,21.2072770375479,20.9965955847693,20.0770958775442,154.134567947563,137.250180845588,92.6072575071811,163.221036660548,176.443665557928,149.399604038324,161.105574226283,45.6240350049417,50.0116021852574,41.6992551415563,40.8257200419759,41.8987826339906,41.3823787980251,42.6747247638678,46.567788711236,58.9876447642012,46.1209393025459,55.1903157656803,71.9195370654463,50.4429103462851,40.846913316249,52.7853372491847,41.8663848936668,41.1509928853885,43.5315208152708,37.8639130990616,39.2097505632432,21.7686088067103,19.8157888478331,23.017243451043,58.8237194000825,45.2635295763516,41.7743982589555,55.3982681269392,46.0428302288925,43.5033258342407,42.786245834075,50.4353994631284,44.6043607842587,51.8363527227463,43.011875588723,49.2087673943344,50.2927956743143,43.0318225970459,50.5958198726602,123.860779704271,71.8274194407405,64.4316626818406,38.0808815995504,37.1121555931307,43.1960209660416,39.1757082419164,41.9501731216552,49.5903037774061,52.1218215548412,39.3859121081945,36.3984689940064,39.7109629904426,43.7704238490532,52.8352676092816,50.3338868846364,38.4725728776956,47.9930468543025,34.3298900725078,41.700707102551,48.4643263394246,35.2316797172394,39.9542123565309,42.0814919341911,38.827233794294,35.7216558110637,31.7137430239577,39.9806811106634,34.9814099962836,73.2450014093653,78.2304800550548,88.5956722796324,81.7526289195667,74.2825652037444,51.4344220598468,53.7991777033016,37.1289669314831,34.5947380616983,21.5652309791032,32.7484033948283,30.5796919652269,32.0775174992832,30.4975602987251,34.7359335381624,36.5811316529877,44.7199731778344,42.5338588513688,36.3254483558903,35.4382274915638,43.5516269348721,39.2772007461923,46.6369418380139,43.0343943409901,38.7563206885356,48.1553401345611,42.2767351966604,41.9624505934126,44.4072609845241,34.6819953060326,48.4076058598651,31.9646777462374,27.869611376778,155.091869928207,153.078462689417,47.0493293231058,63.622673655502,43.5401342794434,44.1195781055201,41.5767157624302,43.731290025317,47.6789162536323,32.5538010407157,45.7436092892631,42.6693552550515,38.3429144608128,128.528526568723,36.1947217281085,46.1189913498191,48.3774269280121,45.5317539404198,33.1862845849907,41.0299275101919,38.0927681775586,32.2514686382586,38.3892460745005,41.8111801203741,47.5508059429527,35.262771759318,29.5892824059319,35.7121536467472,36.8965130012496,31.9720184069379,61.2791290356818,39.0732574047943,52.5196256157983,45.6537884617292,47.7045228497716,62.0723485255206,59.5667454579678,81.292141413598,44.8222962401687,41.5190858893088,42.1209240284977,33.4719093471204,35.845102726491,41.012788951146,47.6295652572514,51.7043834196943,44.0136063311075,143.333758454124,60.1465500408441,50.1520089150631,57.0399144298712,71.7683821187873,81.469759721731,64.2866666710329,19.2075625893056,20.7128149439014,19.0715963850105,49.6428721367859,43.3380311206155,39.8506155568623,36.2897945161252,36.1722752105031,35.8114604543731,41.9428117256792,42.318569331372,42.4044626014128,40.8287165869148,26.7175904627378,356.817630187093,39.9209177937423,43.8464999711309,62.8077338351274,49.0807329215378,46.2939783844732,44.2436789694492,47.7850092377297,52.219953524004,74.8910774560619,190.387834136449,30.0210564596769,44.1940969332558,34.7163035217116,24.2951938968477,35.6263124378288,33.1797862484712,31.9719895723117,35.7408655762477,30.794767234185,40.3896075271499,33.7767720208416,38.203489249983,32.9044498409927,34.8293168501075,56.2291351365724,32.1879632392394,27.9010094055469,35.4236540528206,44.2404170333716,48.6097611418561,36.2640216049185,44.8029912275248,37.6179078026523,134.410938542862,145.462774736268,142.65098284641,161.541991403066,141.812081592523,132.193932043198,137.029567547057,143.652463828526,125.520447288625,128.404557314451,48.4686913218105,57.8586066431495,49.683479274453,53.9696911891613,56.5955539095552,51.843869382904,47.1163062939424,51.0966941952458,54.8771848402004,47.7597730233577,45.1193153804627,47.3452116879051,46.5398292125316,49.6835182661786,48.9350195501825,48.1056628195904,53.6544429124681,50.1563973205633,39.9723323779207,41.6572943980344,41.8300487910207,46.6761370199058,44.3491313302017,44.0399642395955,42.4433305673141,46.284190516747,41.1587938963738,49.9832451731901,48.6178727568185,42.0856703743304,48.6403574309114,54.5714832360622,43.7877216191568,48.1853576088354,47.0692130793985,81.1884378298324,50.997090641099,54.5772477282678,52.0304263227254,52.7213491695642,36.1713823567857
|short_description=p1@Ap2a1
|short_description=p1@Ap2a1
}}
}}

Latest revision as of 20:30, 26 September 2015

Short description:p1@Ap2a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ap2a1_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000085399, ENSMUST00000107857, ENSMUST00000166060, ENSMUST00000166972, ENSMUST00000167930, ENSMUST00000168862, NM_001077264, NM_007458, uc009grv.1, uc009grw.1_5end
EntrezGene:Ap2a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ap2a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I546.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I653.23
CD326+ enterocyte, pool1.CNhs13542.11848-124I361.40
CD326+ enterocyte, pool2.CNhs13197.11849-124I476.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I729.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I831.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E929.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E717.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E629.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F131.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E429.10
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E827.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A166.29
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A353.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A567.16
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A224.61
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A392.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H235.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.51
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D132.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D228.91
GP2+ M cell, pool1.CNhs13228.11845-124H939.05
GP2+ M cell, pool2.CNhs13231.11846-124I136.61
GP2+ M cell, pool3.CNhs13240.11847-124I234.26
Ileum epithelium, pool1.CNhs13199.10252-104B933.82
Ileum epithelium, pool2.CNhs13232.10253-104C129.49
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I378.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6101.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F515.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F620.11
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G841.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H129.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H335.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G933.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H237.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H431.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D844.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D943.19
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B348.27
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7157.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C289.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8107.21
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3101.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C483.71
Mouse Astrocytes, donor3.CNhs12107.11633-122C484.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.95
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.13
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A126.22
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C155.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E167.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C555.18
Mouse Granule cells, donor1.CNhs12131.11713-123C384.97
Mouse Granule cells, donor2.CNhs12357.11731-123E395.75
Mouse Granule cells, donor3.CNhs12108.11636-122C790.64
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6102.33
Mouse Meningeal cells, donor3.CNhs12109.11639-122D172.92
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C788.64
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E783.06
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2103.73
Mouse Microglia, donor1.CNhs12629.11718-123C8100.07
Mouse Microglia, donor2.CNhs12634.11736-123E8111.04
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D566.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F563.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D962.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1126.26
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5108.89
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D259.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F262.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D667.10
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3144.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3158.33
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7153.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D488.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F490.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D876.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4156.62
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5114.80
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6113.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6124.63
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6102.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E194.13
Mouse Schwann, donor1.CNhs12507.11728-123D951.80
Mouse Schwann, donor2.CNhs12573.11746-123F959.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G342.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C426.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C837.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F433.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.61
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A743.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I743.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E335.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I836.04
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G634.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H139.78
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G131.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G227.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G326.79
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B632.20
accessory axillary lymph node, adult.CNhs10475.1063-29H924.08
adrenal gland, adult.CNhs10508.49-24D754.03
adrenal gland, embryo E14.CNhs11038.406-44C552.05
adrenal gland, embryo E16.CNhs11004.1254-43D642.02
adrenal gland, embryo E17.CNhs11043.1263-45I153.27
adrenal gland, embryo E18.CNhs11026.1262-18F536.93
adrenal gland, neonate N00.CNhs11191.1311-23C142.10
adrenal gland, neonate N25.CNhs11223.1377-27I350.64
amnion, adult pregnant day17.5.CNhs10488.583-22A848.20
aorta, adult.CNhs10498.46-23H139.19
bone (os femoris), adult.CNhs10483.56-12G245.12
bone (os femoris), neonate N02.CNhs11227.1985-43F556.29
bone (os femoris), neonate N16.CNhs11225.1525-43A657.64
bone (os femoris), neonate N20.CNhs11195.1350-25C351.40
cecum, adult.CNhs10467.37-13H437.28
cerebellum, adult.CNhs10494.15-8B2102.47
cerebellum, neonate N30.CNhs11135.1395-42I295.51
colon, adult.CNhs10468.36-18H745.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.21
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.08
corpora quadrigemina, adult.CNhs10501.16-22A4154.13
corpus striatum, adult.CNhs10487.19-21D8137.25
corpus striatum, neonate N00.CNhs11226.630-43F192.61
cortex, adult.CNhs10473.12-14D5163.22
cortex, neonate N30.CNhs11107.1392-42F2176.44
diencephalon, adult.CNhs10482.20-12F2149.40
diencephalon, neonate N30.CNhs11201.1388-42B2161.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B145.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A250.01
epididymis, adult.CNhs10490.58-23B241.70
eyeball, adult.CNhs10484.31-12G440.83
eyeball, embryo E12.CNhs11016.345-16C641.90
eyeball, embryo E14.CNhs10521.399-16E241.38
eyeball, embryo E15.CNhs10593.426-16C942.67
eyeball, embryo E17.CNhs11023.1261-18D446.57
eyeball, neonate N00.CNhs11207.633-15C658.99
eyeball, neonate N01.CNhs11140.1532-43E746.12
eyeball, neonate N02.CNhs11205.1551-44G855.19
eyeball, neonate N16.CNhs11188.777-19A271.92
forelimb, embryo E11.CNhs10596.335-25E250.44
forelimb, embryo E12.CNhs10600.359-14H240.85
forelimb, embryo E13.CNhs10589.384-1E252.79
forelimb, embryo E14.CNhs10577.413-26A841.87
forelimb, embryo E15.CNhs11007.437-20E741.15
forelimb, embryo E17.CNhs10598.1517-43C443.53
forelimb, embryo E18.CNhs11008.1520-43B537.86
gonad, embryo E13.CNhs11044.1564-45I639.21
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.77
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.82
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.02
heart, embryo E11.CNhs10586.331-24E958.82
heart, embryo E12.CNhs11015.353-12F545.26
heart, embryo E13.CNhs11013.376-3I941.77
heart, embryo E14.CNhs10597.403-26D455.40
heart, embryo E15.CNhs11017.431-16C846.04
heart, embryo E16.CNhs11021.457-17C643.50
heart, embryo E17.CNhs11025.479-18E542.79
heart, embryo E18.CNhs11030.1283-20G350.44
heart, neonate N00.CNhs11213.639-21E344.60
heart, neonate N03.CNhs11221.1349-25I251.84
heart, neonate N10.CNhs11118.749-24G143.01
heart, neonate N16.CNhs11209.782-15G149.21
heart, neonate N20.CNhs11127.821-26I650.29
heart, neonate N25.CNhs11196.1351-25D343.03
heart, neonate N30.CNhs11202.1390-42D250.60
hippocampus, adult.CNhs10478.13-16E8123.86
hippocampus, neonate N00.CNhs11228.627-43G171.83
intestinal mucosa, adult.CNhs10506.860-29I364.43
intestine, adult.CNhs10496.178-9A338.08
intestine, embryo E12.CNhs11019.1251-16I537.11
intestine, embryo E13.CNhs11010.381-16D543.20
intestine, embryo E15.CNhs10602.976-16D839.18
intestine, embryo E16.CNhs10585.463-22H441.95
intestine, embryo E17.CNhs10582.482-18D349.59
intestine, embryo E18.CNhs10526.1289-20F752.12
intestine, neonate N00.CNhs11126.644-26D139.39
intestine, neonate N01.CNhs11192.1322-23E936.40
intestine, neonate N06.CNhs11102.688-20B839.71
intestine, neonate N07.CNhs11095.720-20F243.77
intestine, neonate N10.CNhs11098.755-23A552.84
intestine, neonate N20.CNhs11187.827-18D150.33
intestine, neonate N25.CNhs11121.1352-25E338.47
intestine, neonate N30.CNhs11131.1384-42G147.99
kidney, embryo E14.CNhs10606.411-4I934.33
kidney, embryo E15.CNhs10997.434-16F841.70
kidney, embryo E16.CNhs10584.464-22A548.46
kidney, embryo E17.CNhs11028.483-18I235.23
kidney, embryo E18.CNhs11001.1288-20C739.95
kidney, neonate N00.CNhs11214.646-21G742.08
kidney, neonate N10.CNhs11206.758-6D538.83
kidney, neonate N20.CNhs11113.832-19I135.72
kidney, neonate N25.CNhs11122.1353-25F331.71
kidney, neonate N30.CNhs11203.1385-42H139.98
liver, adult pregnant day01.CNhs10466.508-5B234.98
liver, embryo E12.CNhs10601.355-15F873.25
liver, embryo E13.CNhs10524.378-3H678.23
liver, embryo E14.CNhs10594.409-16E188.60
liver, embryo E15.CNhs10520.433-16D781.75
liver, embryo E16.CNhs10523.462-17F574.28
liver, embryo E17.CNhs10510.481-18A351.43
liver, embryo E18.CNhs10579.499-43G453.80
liver, neonate N00.CNhs11117.641-24F437.13
liver, neonate N03.CNhs11123.1345-25G234.59
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H232.75
liver, neonate N10.CNhs11115.751-24B930.58
liver, neonate N20.CNhs11220.823-25A332.08
liver, neonate N25.CNhs11198.1368-26H130.50
liver, neonate N30.CNhs11106.1382-42D134.74
lung, adult.CNhs10474.28-22B136.58
lung, embryo E12.CNhs10522.354-16G244.72
lung, embryo E14.CNhs10604.404-26F842.53
lung, embryo E15.CNhs11020.432-17C536.33
lung, embryo E16.CNhs10998.458-17B635.44
lung, embryo E17.CNhs10605.480-44A643.55
lung, embryo E18.CNhs10583.1287-20I639.28
lung, neonate N00.CNhs11224.640-42C646.64
lung, neonate N06.CNhs11212.683-20E543.03
lung, neonate N07.CNhs11111.715-19A338.76
lung, neonate N10.CNhs11219.750-23E648.16
lung, neonate N20.CNhs11109.822-18A442.28
lung, neonate N25.CNhs11119.1359-25C741.96
lung, neonate N30.CNhs11133.1394-42H244.41
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A134.68
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A148.41
mammary gland, adult lactating day02.CNhs10480.595-22B631.96
mammary gland, adult pregnant day19.CNhs10476.588-5H227.87
medulla oblongata, adult.CNhs10477.17-12C2155.09
medulla oblongata, neonate N30.CNhs11200.1396-42A3153.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C747.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C263.62
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.54
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E244.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E341.58
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D743.73
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D847.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D932.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D445.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D542.67
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D638.34
olfactory brain, adult.CNhs10489.18-22I9128.53
ovary, adult.CNhs10507.91-2I736.19
ovary, embryo E18.CNhs11040.505-44H746.12
ovary, neonate N00.CNhs11217.1299-22I448.38
oviduct, adult pregnant day01.CNhs10500.988-6G645.53
pancreas, adult.CNhs10486.34-16E433.19
pancreas, embryo E14.CNhs11012.405-44F441.03
pancreas, embryo E15.CNhs11042.1556-45F238.09
pancreas, embryo E16.CNhs11003.460-26E532.25
pancreas, embryo E17.CNhs10599.1558-45G338.39
pancreas, embryo E18.CNhs10580.1535-43I741.81
pancreas, neonate N00.CNhs11105.645-26G947.55
pancreas, neonate N01.CNhs11138.1531-43D735.26
pancreas, neonate N02.CNhs11139.1539-43D829.59
pancreas, neonate N16.CNhs11136.787-43B635.71
pancreas, neonate N25.CNhs11094.1555-45E236.90
pancreas, neonate N30.CNhs11182.1548-44H531.97
pituitary gland, adult.CNhs10493.21-1G861.28
pituitary gland, embryo E12.CNhs11018.346-16E639.07
pituitary gland, embryo E13.CNhs11009.370-44C752.52
pituitary gland, embryo E14.CNhs11037.398-44A545.65
pituitary gland, embryo E15.CNhs10592.427-16B947.70
pituitary gland, embryo E16.CNhs11036.449-43F662.07
pituitary gland, embryo E17.CNhs11039.1265-44F559.57
pituitary gland, neonate N00.CNhs11190.1308-22E981.29
placenta, adult pregnant day10.CNhs10472.539-13I744.82
placenta, adult pregnant day17.CNhs10464.577-18G341.52
prostate, adult.CNhs10470.859-1F842.12
skin, adult.CNhs10492.30-1C333.47
skin, neonate N00.CNhs11124.650-25G435.85
skin, neonate N03.CNhs11215.662-22H341.01
skin, neonate N06.CNhs11097.693-20I547.63
skin, neonate N10.CNhs11108.762-6C451.70
small intestine, neonate N16.CNhs11114.790-21I144.01
spinal cord, adult.CNhs10505.24-13C9143.33
spleen, adult.CNhs10465.25-2G260.15
spleen, embryo E16.CNhs11035.461-43C150.15
spleen, embryo E18.CNhs11011.1271-21F257.04
spleen, neonate N10.CNhs11116.752-24D171.77
spleen, neonate N20.CNhs11112.824-19H181.47
spleen, neonate N25.CNhs11099.1354-25G364.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D319.07
stomach, adult.CNhs10503.33-1H649.64
stomach, embryo E12.CNhs10588.356-43E343.34
stomach, embryo E15.CNhs10603.1252-16G839.85
stomach, embryo E16.CNhs11022.459-17D436.29
stomach, embryo E17.CNhs11006.1035-18D536.17
stomach, embryo E18.CNhs10999.1286-20C635.81
stomach, neonate N03.CNhs11193.1340-24B841.94
stomach, neonate N07.CNhs11210.718-18A942.32
stomach, neonate N25.CNhs11104.1355-25E442.40
stomach, neonate N30.CNhs11134.1386-42I140.83
submandibular gland, adult.CNhs10469.59-29C126.72
testis, adult.CNhs10504.57-7G5356.82
testis, embryo E13.CNhs11031.389-23F539.92
testis, embryo E15.CNhs11034.443-27C543.85
testis, embryo E16.CNhs11033.470-26G562.81
testis, embryo E17.CNhs11029.486-18I549.08
testis, embryo E18.CNhs11027.503-18G546.29
testis, neonate N00.CNhs11189.1300-22B744.24
testis, neonate N07.CNhs11222.726-26I447.79
testis, neonate N10.CNhs11204.763-44D952.22
testis, neonate N20.CNhs11110.839-18H374.89
testis, neonate N30.CNhs11130.1391-42E2190.39
thymus, adult.CNhs10471.38-12B530.02
thymus, embryo E14.CNhs11041.402-44I444.19
thymus, embryo E15.CNhs11005.430-45I234.72
thymus, embryo E16.CNhs11002.456-26C524.30
thymus, embryo E17.CNhs10581.478-18C135.63
thymus, embryo E18.CNhs10595.1273-19G433.18
thymus, neonate N02.CNhs11181.1541-43F831.97
thymus, neonate N03.CNhs11137.2104-43C735.74
thymus, neonate N06.CNhs11197.681-26C430.79
thymus, neonate N07.CNhs11211.713-19D340.39
thymus, neonate N10.CNhs11194.748-24E433.78
thymus, neonate N20.CNhs11186.820-7A238.20
thymus, neonate N25.CNhs11125.1362-25G732.90
thymus, neonate N30.CNhs11132.1393-42G234.83
tongue, adult.CNhs10499.32-1B456.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H332.19
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F727.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G535.42
urinary bladder, adult.CNhs10481.879-12E444.24
uterus, adult pregnant day19.CNhs10497.590-15F548.61
uterus, adult.CNhs10509.92-27E536.26
vagina, adult.CNhs10502.89-27D544.80
vesicular gland, adult.CNhs10491.51-27F837.62
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1134.41
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2145.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3142.65
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7161.54
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4141.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5132.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6137.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7143.65
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8125.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9128.40
whole body, embryo E11.CNhs11014.324-5I848.47
whole body, embryo E12.CNhs10587.857-27C957.86
whole body, embryo E13.CNhs10512.372-23H249.68
whole body, embryo E14.5.CNhs10578.420-27D253.97
whole body, embryo E14.CNhs10519.395-14B156.60
whole body, embryo E16.CNhs10514.453-14F251.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G547.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G551.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G554.88
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G547.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G545.12
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G547.35
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G546.54
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G549.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G548.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G548.11
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G553.65
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G550.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G539.97
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G541.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G541.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G546.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G544.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G544.04
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G542.44
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G546.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G541.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G549.98
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G548.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G542.09
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G548.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G554.57
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G543.79
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G548.19
whole body, embryo E17.5.CNhs10513.490-9F947.07
whole body, embryo E17.CNhs10517.475-3I581.19
whole body, embryo E18.CNhs10516.493-3B351.00
whole body, neonate N00.CNhs10525.657-19C254.58
whole body, neonate N01.CNhs10576.659-23C652.03
whole body, neonate N06.CNhs10515.692-21D152.72
whole body, neonate N10.CNhs10518.761-6B436.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.88e-1123
neuroblast (sensu Vertebrata)3.88e-1123
neural cell1.16e-1043
ectodermal cell5.12e-1044
neurectodermal cell5.12e-1044
electrically responsive cell3.00e-0739
electrically active cell3.00e-0739
neuron6.55e-0733
neuronal stem cell6.55e-0733
neuroblast6.55e-0733
electrically signaling cell6.55e-0733

Uber anatomy
Ontology termp-valuen
nervous system2.26e-2575
regional part of nervous system3.21e-2554
central nervous system6.17e-2573
neural tube9.34e-2452
neural rod9.34e-2452
future spinal cord9.34e-2452
neural keel9.34e-2452
neurectoderm5.77e-2164
neural plate5.77e-2164
presumptive neural plate5.77e-2164
brain6.87e-2147
future brain6.87e-2147
regional part of brain2.80e-2046
ectoderm-derived structure7.86e-2095
ectoderm7.86e-2095
presumptive ectoderm7.86e-2095
structure with developmental contribution from neural crest3.36e-1992
gray matter1.69e-1734
anterior neural tube9.13e-1740
regional part of forebrain4.15e-1639
forebrain4.15e-1639
future forebrain4.15e-1639
ecto-epithelium7.32e-1673
pre-chordal neural plate3.06e-1549
brain grey matter7.25e-1529
regional part of telencephalon7.25e-1529
telencephalon7.25e-1529
tube2.66e-11114
cerebral cortex6.05e-1121
cerebral hemisphere6.05e-1121
pallium6.05e-1121
anatomical conduit9.92e-10122
regional part of cerebral cortex1.49e-0917
posterior neural tube1.12e-0712
chordal neural plate1.12e-0712
occipital lobe3.06e-0710
visual cortex3.06e-0710
neocortex3.06e-0710
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