FFCP PHASE1:Mm9::chr6:136756784..136756866,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:136756784..136756866,+
|short_description=p1@H2afj
|description=CAGE_peak_1_at_H2afj_5end
|association_with_transcript=15bp_to_ENSMUST00000074556,NM_177688...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=232440 | |EntrezGene=232440 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=792 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R1M2 | |UniProt=Q8R1M2 | ||
|association_with_transcript=15bp_to_ENSMUST00000074556,NM_177688,uc009eme.1_5end | |||
|cluster_id=chr6:136756784..136756866,+ | |||
|description=CAGE_peak_1_at_H2afj_5end | |||
|id=chr6:136756784..136756866,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.72e-19!66;CL:0000144!9.24e-15!121;CL:0000012!9.24e-15!121;CL:0002371!2.71e-14!118;CL:0000219!4.85e-14!54;CL:0000548!7.64e-13!115;CL:0000004!7.64e-13!115;CL:0000255!7.64e-13!115;CL:0002320!1.68e-11!46;CL:0000134!1.68e-11!46;CL:0000066!9.73e-09!25;CL:0000223!2.93e-07!20;CL:0000988!3.12e-07!32;CL:0002032!3.12e-07!32;CL:0000037!3.12e-07!32;CL:0000566!3.12e-07!32;CL:0000837!3.12e-07!32;CL:0002076!4.56e-07!15;CL:0000034!5.05e-07!97;CL:0000723!6.06e-07!91;CL:0000048!6.06e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,4.85e-14,54;CL:0002320,1.68e-11,46;CL:0000134,1.68e-11,46;CL:0000066,9.73e-09,25;CL:0000223,2.93e-07,20;CL:0000988,3.12e-07,32;CL:0002032,3.12e-07,32;CL:0000037,3.12e-07,32;CL:0000837,3.12e-07,32;CL:0002076,4.56e-07,15;CL:0000034,5.05e-07,97;CL:0000723,6.06e-07,91;CL:0000048,6.06e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.68e-11!46;UBERON:0001007!1.73e-10!128;UBERON:0001555!1.73e-10!128;UBERON:0007026!1.73e-10!128;UBERON:0004119!8.51e-10!130;UBERON:0000925!8.51e-10!130;UBERON:0006595!8.51e-10!130;UBERON:0004921!9.93e-10!126;UBERON:0004185!9.93e-10!126;UBERON:0002405!2.54e-08!70;UBERON:0000490!3.84e-08!66;UBERON:0000344!7.16e-08!15;UBERON:0002193!8.86e-08!48;UBERON:0002371!1.50e-07!16;UBERON:0002390!2.64e-07!45;UBERON:0003061!2.64e-07!45;UBERON:0002204!3.67e-07!32;UBERON:0001242!6.30e-07!13;UBERON:0000060!6.30e-07!13;UBERON:0001262!6.30e-07!13;UBERON:0004786!6.30e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.68e-11,46;UBERON:0001007,1.20e-10,116;UBERON:0001555,1.20e-10,116;UBERON:0007026,1.20e-10,116;UBERON:0004119,6.50e-10,118;UBERON:0000925,6.50e-10,118;UBERON:0006595,6.50e-10,118;UBERON:0004921,7.12e-10,114;UBERON:0000490,3.84e-08,66;UBERON:0000344,7.16e-08,15;UBERON:0002193,8.86e-08,48;UBERON:0002405,8.86e-08,48;UBERON:0002371,1.50e-07,16;UBERON:0002390,2.64e-07,45;UBERON:0003061,2.64e-07,45;UBERON:0002204,3.67e-07,32;UBERON:0001242,6.30e-07,13;UBERON:0001262,6.30e-07,13;UBERON:0004786,6.30e-07,13 | |||
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| ||
|short_description=p1@H2afj | |||
}} | }} |
Latest revision as of 20:23, 26 September 2015
Short description: | p1@H2afj |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_H2afj_5end |
Coexpression cluster: | MCL_coexpression_mm9:792 |
Association with transcript: | 15bp_to_ENSMUST00000074556, NM_177688, uc009eme.1_5end |
EntrezGene: | H2afj |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 4.85e-14 | 54 |
connective tissue cell | 1.68e-11 | 46 |
mesenchymal cell | 1.68e-11 | 46 |
epithelial cell | 9.73e-09 | 25 |
endodermal cell | 2.93e-07 | 20 |
hematopoietic cell | 3.12e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.12e-07 | 32 |
hematopoietic stem cell | 3.12e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.12e-07 | 32 |
endo-epithelial cell | 4.56e-07 | 15 |
stem cell | 5.05e-07 | 97 |
somatic stem cell | 6.06e-07 | 91 |
multi fate stem cell | 6.06e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.68e-11 | 46 |
digestive system | 1.20e-10 | 116 |
digestive tract | 1.20e-10 | 116 |
primitive gut | 1.20e-10 | 116 |
endoderm-derived structure | 6.50e-10 | 118 |
endoderm | 6.50e-10 | 118 |
presumptive endoderm | 6.50e-10 | 118 |
subdivision of digestive tract | 7.12e-10 | 114 |
unilaminar epithelium | 3.84e-08 | 66 |
mucosa | 7.16e-08 | 15 |
hemolymphoid system | 8.86e-08 | 48 |
immune system | 8.86e-08 | 48 |
bone marrow | 1.50e-07 | 16 |
hematopoietic system | 2.64e-07 | 45 |
blood island | 2.64e-07 | 45 |
musculoskeletal system | 3.67e-07 | 32 |
intestinal mucosa | 6.30e-07 | 13 |
wall of intestine | 6.30e-07 | 13 |
gastrointestinal system mucosa | 6.30e-07 | 13 |