FFCP PHASE1:Mm9::chr12:80081745..80081804,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:80081745..80081804,-
|short_description=p2@Tmem229b
|description=CAGE_peak_2_at_Tmem229b_5end
|association_with_transcript=0bp_to_ENSMUST00000174072,ENSMU...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=268567 | |EntrezGene=268567 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=123 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BFQ2 | |UniProt=Q8BFQ2 | ||
|association_with_transcript=0bp_to_ENSMUST00000174072,ENSMUST00000174344,uc007nzm.2,uc007nzo.2_5end | |||
|cluster_id=chr12:80081745..80081804,- | |||
|description=CAGE_peak_2_at_Tmem229b_5end | |||
|id=chr12:80081745..80081804,- | |||
|ontology_enrichment_celltype=CL:0000988!3.41e-11!32;CL:0002032!3.41e-11!32;CL:0000037!3.41e-11!32;CL:0000566!3.41e-11!32;CL:0000837!3.41e-11!32;CL:0002031!5.16e-09!25;CL:0000738!5.53e-08!17;CL:0002087!5.53e-08!17;CL:0000838!8.04e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.58e-14,32;CL:0002032,5.58e-14,32;CL:0000037,5.58e-14,32;CL:0000837,5.58e-14,32;CL:0002031,2.87e-11,25;CL:0002320,1.82e-10,46;CL:0000134,1.82e-10,46;CL:0000738,1.42e-09,17;CL:0002087,1.42e-09,17;CL:0000838,3.81e-08,12;CL:0000049,4.72e-08,19;CL:0000084,1.58e-07,11;CL:0000827,1.58e-07,11;CL:0000542,3.69e-07,13;CL:0000051,3.69e-07,13;CL:0000219,3.99e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.43e-21!48;UBERON:0002390!6.05e-20!45;UBERON:0003061!6.05e-20!45;UBERON:0002405!6.52e-20!70;UBERON:0004177!8.38e-12!29;UBERON:0004119!4.77e-11!130;UBERON:0000925!4.77e-11!130;UBERON:0006595!4.77e-11!130;UBERON:0003081!1.10e-10!88;UBERON:0005057!1.27e-10!51;UBERON:0001007!2.01e-10!128;UBERON:0001555!2.01e-10!128;UBERON:0007026!2.01e-10!128;UBERON:0004921!9.81e-10!126;UBERON:0004185!9.81e-10!126;UBERON:0003408!1.43e-09!24;UBERON:0002370!2.63e-09!23;UBERON:0000974!2.63e-09!23;UBERON:0004807!2.63e-09!23;UBERON:0005058!2.63e-09!23;UBERON:0003351!2.63e-09!23;UBERON:0009113!2.63e-09!23;UBERON:0003295!2.63e-09!23;UBERON:0009722!2.63e-09!23;UBERON:0005562!2.63e-09!23;UBERON:0007690!2.63e-09!23;UBERON:0006562!5.09e-09!24;UBERON:0001557!5.09e-09!24;UBERON:0001042!5.09e-09!24;UBERON:0008814!5.09e-09!24;UBERON:0009145!5.09e-09!24;UBERON:0000077!5.69e-09!97;UBERON:0002371!6.00e-09!16;UBERON:0001474!3.87e-08!22;UBERON:0004765!3.87e-08!22;UBERON:0001434!3.87e-08!22;UBERON:0001041!4.68e-08!92;UBERON:0000926!9.91e-08!193;UBERON:0004120!9.91e-08!193;UBERON:0006603!9.91e-08!193;UBERON:0005911!7.56e-07!69;UBERON:0001004!8.89e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.32e-27,48;UBERON:0002405,1.32e-27,48;UBERON:0002390,1.48e-25,45;UBERON:0003061,1.48e-25,45;UBERON:0000077,2.14e-16,35;UBERON:0004177,2.79e-15,29;UBERON:0005057,2.79e-15,29;UBERON:0003081,1.75e-13,87;UBERON:0003408,1.84e-12,24;UBERON:0004119,3.37e-12,118;UBERON:0000925,3.37e-12,118;UBERON:0006595,3.37e-12,118;UBERON:0002370,3.87e-12,23;UBERON:0000974,3.87e-12,23;UBERON:0004807,3.87e-12,23;UBERON:0005058,3.87e-12,23;UBERON:0003351,3.87e-12,23;UBERON:0009113,3.87e-12,23;UBERON:0003295,3.87e-12,23;UBERON:0009722,3.87e-12,23;UBERON:0005562,3.87e-12,23;UBERON:0007690,3.87e-12,23;UBERON:0001007,1.88e-11,116;UBERON:0001555,1.88e-11,116;UBERON:0007026,1.88e-11,116;UBERON:0006562,3.01e-11,24;UBERON:0001557,3.01e-11,24;UBERON:0001042,3.01e-11,24;UBERON:0008814,3.01e-11,24;UBERON:0009145,3.01e-11,24;UBERON:0002371,8.45e-11,16;UBERON:0004921,1.25e-10,114;UBERON:0002384,1.82e-10,46;UBERON:0001474,1.10e-09,22;UBERON:0004765,1.10e-09,22;UBERON:0001434,1.10e-09,22;UBERON:0001041,1.13e-09,80;UBERON:0000926,1.46e-09,120;UBERON:0004120,1.46e-09,120;UBERON:0006603,1.46e-09,120;UBERON:0001004,5.11e-09,42;UBERON:0000072,5.14e-09,27;UBERON:0000065,1.08e-08,41;UBERON:0005911,9.66e-08,69;UBERON:0002204,1.63e-07,32;UBERON:0003929,3.72e-07,55 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,0.30246421130683,0,1.6787927191189,0.934450562382103,19.7558684865612,6.19470377467334,5.14941957908386,3.4243593645101,3.03134204182278,27.0497153291305,31.1216632611631,4.99664642723494,6.88415909125408,2.79824751251259,38.486384173705,32.6332351981658,26.7365480632759,1.9559956734746,29.4894125066629,28.7319768052829,8.31960598525715,5.96464130774642,0,0.86152399231815,0.646413698057667,1.52018735565099,2.52030129759931,3.54768817048488,0.635030673459631,0,0,0.288851619751275,0,1.02084678131185,9.20769587621197,7.0320181007142,12.0410461113974,8.2352408324342,12.9778642142105,11.6522484727477,0,0,0.183546752161682,0,0,0,0,0,0,12.080347636157,5.07753499407941,9.07453257684653,0,0.286533439938757,0.515672092277442,0,0,0,0,0,12.1486461832989,19.7773272513395,12.7886420690298,6.89080254192331,4.61061966385865,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0.52091337055676,0.279182999001381,1.12552522006336,0.30559649555362,0,0.142371680799103,0.186399445825301,0.681535739998656,0,3.18850937571846,1.72084775396277,0,0,0,0,3.37066608316204,0,0,0,0,1.28326477414318,0,0,0,0,0,2.16949371466214,26.6706020156587,3.26572705942614,0,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,0.502666365318702,1.23597483867187,3.90418263683761,20.3460426948471,0.808834249737046,8.61281921995535,5.33362778448744,0,0.292780797011547,0.209446706813455,3.32094171771169,20.0091257924887,11.3981518888747,17.4086211090099,0.299581278809645,0.915001205637253,0,0,0,0,0.486723789203273,0.712875546952214,9.95255764880744,0.252722758433675,2.73574412652416,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0,1.55222022443409,0,0.189106080167819,0,0,0.834141747676794,0,0.61734640922383,0.199034266818493,4.21327912387941,9.00717674901503,12.7873574728017,0,0,0,0.23674473558521,0.393528463494808,0,0.232533944750408,0.536546802799238,0.350296027101508,0,0.820837320395476,1.21603214318784,1.31579988682799,2.63460138349261,2.01309628140558,0.630869845692382,0.102904612379284,4.29544417878937,0.264450566663544,0.213288250535234,0.928946687441754,0.77320476793256,1.00841762311671,1.33426826306922,0.760902504450237,5.21981967698963,1.81168850196412,6.28338022000674,4.57599885694647,6.04388670069272,6.29173586057955,3.02593269824572,2.78797782556114,0.379335801906163,0.228497025219458,0,0.203651327845314,0.775809948670503,0.210407459670956,0.316182685621286,0.442830443938806,1.09899109488962,0.370191491765402,1.77871576252289,1.00107063429656,0.982794975566015,0.674586337154561,3.24576194221605,2.17059443777175,5.34714288740982,5.75392274901621,5.18832725680113,3.29473695825698,8.62609239164127,2.60498663367952,3.74445207737473,0.757736633841335,0.717589654087649,0.964887042726734,4.98833613449833,0.189491411770485,0.162964976442026,0,0.234690248288502,1.17254380209271,2.14239276797412,0.975668239288994,2.20689201748667,3.5434350343804,3.6674596791222,4.58817281204066,5.69860440157455,4.48412081602686,43.729472342389,26.6513785071168,3.44234991113325,3.86311444826625,0.642202359951168,0.35163505977661,0,1.26235463602186,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0.141940085208269,1.24645922567079,0.325773918707152,4.61916344323099,0,0.728341908464944,0,0.754420319023592,0.590603785761546,0.614870295887855,2.06742634534577,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,1.03135543248187,1.36175842301515,0,0.129358683782755,0.428674070063185,0.354680467284547,0.356737635204141,0.164549020602121,0,5.63212099352905,5.08396970073168,1.32317038832977,0.8244312647074,0.484393280087717,0.482503399425247,0.477489376012546,0.492422699235184,5.82961673259701,1.48340241608408,11.619219894254,3.92135049130123,5.00025223898222,7.15800136617826,12.9859516334974,11.8964650067392,7.81900777971734,5.87796099759364,5.8043988997858,1.90934123603023,0.474503990371703,0.203319467126849,0.756037385752609,0.418176592028937,0.218362563746178,0.809186078308924,1.48776220305605,1.30877970992015,1.68499465279331,4.34937519160848,0,0,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0.864090018773596,27.4929674946515,7.9062833963164,12.8388696456034,14.6810529964908,15.0382424360684,17.28527786597,17.4283401803955,18.165811842473,20.6981222393703,18.518254017165,20.3668893976418,22.4153125701431,21.1666051608725,30.9723790781158,0.680191150845634,0.221985953374065,0.358855426437903,0.167884616364078,1.9318959403219,3.56596703357246,5.31139710375069,1.2862102744744,2.50786052017682,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0.853668028770671,1.21553358534147,1.46729213839588,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.187283014939765,0.704276676453562,0.918967503289812,1.42888107384922,0.927074607558844,0.578727661391115,0.824171801606613,0.588795680537589,1.02860775715625,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.423073039458382,0.548783918618318,0.789209134313529,0.543216455383447,0.561142271657738,0.711810108745045,0.492522411877817,0.409231043169689,0.619747364743864,1.35034627686799,0.249810577937946,1.63752125911786,1.71896843238639,1.72159498861959,1.98532277207564,2.55054619182464 | |phase1_expression=0.160148847104794,0.697950815278722,0,0.30246421130683,0,1.6787927191189,0.934450562382103,19.7558684865612,6.19470377467334,5.14941957908386,3.4243593645101,3.03134204182278,27.0497153291305,31.1216632611631,4.99664642723494,6.88415909125408,2.79824751251259,38.486384173705,32.6332351981658,26.7365480632759,1.9559956734746,29.4894125066629,28.7319768052829,8.31960598525715,5.96464130774642,0,0.86152399231815,0.646413698057667,1.52018735565099,2.52030129759931,3.54768817048488,0.635030673459631,0,0,0.288851619751275,0,1.02084678131185,9.20769587621197,7.0320181007142,12.0410461113974,8.2352408324342,12.9778642142105,11.6522484727477,0,0,0.183546752161682,0,0,0,0,0,0,12.080347636157,5.07753499407941,9.07453257684653,0,0.286533439938757,0.515672092277442,0,0,0,0,0,12.1486461832989,19.7773272513395,12.7886420690298,6.89080254192331,4.61061966385865,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0.52091337055676,0.279182999001381,1.12552522006336,0.30559649555362,0,0.142371680799103,0.186399445825301,0.681535739998656,0,3.18850937571846,1.72084775396277,0,0,0,0,3.37066608316204,0,0,0,0,1.28326477414318,0,0,0,0,0,2.16949371466214,26.6706020156587,3.26572705942614,0,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,0.502666365318702,1.23597483867187,3.90418263683761,20.3460426948471,0.808834249737046,8.61281921995535,5.33362778448744,0,0.292780797011547,0.209446706813455,3.32094171771169,20.0091257924887,11.3981518888747,17.4086211090099,0.299581278809645,0.915001205637253,0,0,0,0,0.486723789203273,0.712875546952214,9.95255764880744,0.252722758433675,2.73574412652416,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0,1.55222022443409,0,0.189106080167819,0,0,0.834141747676794,0,0.61734640922383,0.199034266818493,4.21327912387941,9.00717674901503,12.7873574728017,0,0,0,0.23674473558521,0.393528463494808,0,0.232533944750408,0.536546802799238,0.350296027101508,0,0.820837320395476,1.21603214318784,1.31579988682799,2.63460138349261,2.01309628140558,0.630869845692382,0.102904612379284,4.29544417878937,0.264450566663544,0.213288250535234,0.928946687441754,0.77320476793256,1.00841762311671,1.33426826306922,0.760902504450237,5.21981967698963,1.81168850196412,6.28338022000674,4.57599885694647,6.04388670069272,6.29173586057955,3.02593269824572,2.78797782556114,0.379335801906163,0.228497025219458,0,0.203651327845314,0.775809948670503,0.210407459670956,0.316182685621286,0.442830443938806,1.09899109488962,0.370191491765402,1.77871576252289,1.00107063429656,0.982794975566015,0.674586337154561,3.24576194221605,2.17059443777175,5.34714288740982,5.75392274901621,5.18832725680113,3.29473695825698,8.62609239164127,2.60498663367952,3.74445207737473,0.757736633841335,0.717589654087649,0.964887042726734,4.98833613449833,0.189491411770485,0.162964976442026,0,0.234690248288502,1.17254380209271,2.14239276797412,0.975668239288994,2.20689201748667,3.5434350343804,3.6674596791222,4.58817281204066,5.69860440157455,4.48412081602686,43.729472342389,26.6513785071168,3.44234991113325,3.86311444826625,0.642202359951168,0.35163505977661,0,1.26235463602186,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0.141940085208269,1.24645922567079,0.325773918707152,4.61916344323099,0,0.728341908464944,0,0.754420319023592,0.590603785761546,0.614870295887855,2.06742634534577,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,1.03135543248187,1.36175842301515,0,0.129358683782755,0.428674070063185,0.354680467284547,0.356737635204141,0.164549020602121,0,5.63212099352905,5.08396970073168,1.32317038832977,0.8244312647074,0.484393280087717,0.482503399425247,0.477489376012546,0.492422699235184,5.82961673259701,1.48340241608408,11.619219894254,3.92135049130123,5.00025223898222,7.15800136617826,12.9859516334974,11.8964650067392,7.81900777971734,5.87796099759364,5.8043988997858,1.90934123603023,0.474503990371703,0.203319467126849,0.756037385752609,0.418176592028937,0.218362563746178,0.809186078308924,1.48776220305605,1.30877970992015,1.68499465279331,4.34937519160848,0,0,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0,0.864090018773596,27.4929674946515,7.9062833963164,12.8388696456034,14.6810529964908,15.0382424360684,17.28527786597,17.4283401803955,18.165811842473,20.6981222393703,18.518254017165,20.3668893976418,22.4153125701431,21.1666051608725,30.9723790781158,0.680191150845634,0.221985953374065,0.358855426437903,0.167884616364078,1.9318959403219,3.56596703357246,5.31139710375069,1.2862102744744,2.50786052017682,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0.853668028770671,1.21553358534147,1.46729213839588,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,0.754505365544305,0.187283014939765,0.704276676453562,0.918967503289812,1.42888107384922,0.927074607558844,0.578727661391115,0.824171801606613,0.588795680537589,1.02860775715625,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.423073039458382,0.548783918618318,0.789209134313529,0.543216455383447,0.561142271657738,0.711810108745045,0.492522411877817,0.409231043169689,0.619747364743864,1.35034627686799,0.249810577937946,1.63752125911786,1.71896843238639,1.72159498861959,1.98532277207564,2.55054619182464 | ||
|short_description=p2@Tmem229b | |||
}} | }} |
Latest revision as of 20:16, 26 September 2015
Short description: | p2@Tmem229b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem229b_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | 0bp_to_ENSMUST00000174072, ENSMUST00000174344, uc007nzm.2, uc007nzo.2_5end |
EntrezGene: | Tmem229b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.58e-14 | 32 |
hematopoietic oligopotent progenitor cell | 5.58e-14 | 32 |
hematopoietic stem cell | 5.58e-14 | 32 |
hematopoietic multipotent progenitor cell | 5.58e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 2.87e-11 | 25 |
connective tissue cell | 1.82e-10 | 46 |
mesenchymal cell | 1.82e-10 | 46 |
leukocyte | 1.42e-09 | 17 |
nongranular leukocyte | 1.42e-09 | 17 |
lymphoid lineage restricted progenitor cell | 3.81e-08 | 12 |
common myeloid progenitor | 4.72e-08 | 19 |
T cell | 1.58e-07 | 11 |
pro-T cell | 1.58e-07 | 11 |
lymphocyte | 3.69e-07 | 13 |
common lymphoid progenitor | 3.69e-07 | 13 |
motile cell | 3.99e-07 | 54 |