FFCP PHASE1:Mm9::chr4:154956870..154956881,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:154956870..154956881,+
|short_description=p4@Nadk
|description=CAGE_peak_4_at_Nadk_5end
|association_with_transcript=90bp_to_uc008wdv.2_5end
|EntrezGene=1...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=192185 | |EntrezGene=192185 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TNZ1 | |UniProt=Q3TNZ1 | ||
|association_with_transcript=90bp_to_uc008wdv.2_5end | |||
|cluster_id=chr4:154956870..154956881,+ | |||
|description=CAGE_peak_4_at_Nadk_5end | |||
|id=chr4:154956870..154956881,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.62e-12,3;CL:0002202,1.62e-12,3;CL:0000069,1.62e-12,3;CL:0002632,1.62e-12,3;CL:0002368,1.62e-12,3;CL:0000307,1.62e-12,3;CL:0000377,1.62e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.50e-10!59;UBERON:0000344!1.71e-09!15;UBERON:0007023!1.54e-08!51;UBERON:0001242!2.57e-07!13;UBERON:0000060!2.57e-07!13;UBERON:0001262!2.57e-07!13;UBERON:0004786!2.57e-07!13;UBERON:0004923!7.14e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.62e-12,3;UBERON:0001005,1.62e-12,3;UBERON:0007196,1.62e-12,3;UBERON:0001558,1.62e-12,3;UBERON:0000331,4.91e-11,3;UBERON:0002116,4.91e-11,3;UBERON:0001204,4.91e-11,3;UBERON:0001168,4.91e-11,3;UBERON:0000344,1.54e-10,15;UBERON:0005409,1.65e-10,47;UBERON:0002108,2.14e-08,4;UBERON:0007023,5.33e-08,51;UBERON:0001962,7.88e-08,2;UBERON:0001961,7.88e-08,2;UBERON:0001744,7.88e-08,2;UBERON:0000945,7.90e-08,16;UBERON:0010039,7.90e-08,16;UBERON:0001007,7.99e-08,116;UBERON:0001555,7.99e-08,116;UBERON:0007026,7.99e-08,116;UBERON:0004119,1.25e-07,118;UBERON:0000925,1.25e-07,118;UBERON:0006595,1.25e-07,118 | |||
|phase1_expression=0,0,1.36499771816861,0.90739263392049,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.91990907352088,1.60586496747019,0.57423196411502,0,0.215471232685889,4.94060890586572,1.51218077855958,1.33038306393183,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,9.95858788651585,10.1343946190039,7.58286667522175,0.5709193985953,0,0.148442139064825,0,0.608930956624282,0.922461989024234,2.11011696773672,0.352766121407114,1.0053327306374,0.247194967734374,0.144599356919912,0,0,0,0,3.72783522436244,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78634866779954,0,0,0,0,0,0,0,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0.528901133327089,0,0,0,0,0,0,1.42358718463353,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.796565093017469,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,1.15420377059036,0,0.241251699712623,0.477489376012546,0.656563598980245,0.874442509889552,0,0,0,0,0,0,0,0,0.139951452323658,0,5.72802370809068,0,0,0.108005340821801,0.627264888043406,1.74690050996942,2.02296519577231,3.2234847732881,3.40282724579238,10.4988128366352,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,3.37828455812128,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,1.36499771816861,0.90739263392049,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.91990907352088,1.60586496747019,0.57423196411502,0,0.215471232685889,4.94060890586572,1.51218077855958,1.33038306393183,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,9.95858788651585,10.1343946190039,7.58286667522175,0.5709193985953,0,0.148442139064825,0,0.608930956624282,0.922461989024234,2.11011696773672,0.352766121407114,1.0053327306374,0.247194967734374,0.144599356919912,0,0,0,0,3.72783522436244,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78634866779954,0,0,0,0,0,0,0,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0.528901133327089,0,0,0,0,0,0,1.42358718463353,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.796565093017469,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,1.15420377059036,0,0.241251699712623,0.477489376012546,0.656563598980245,0.874442509889552,0,0,0,0,0,0,0,0,0.139951452323658,0,5.72802370809068,0,0,0.108005340821801,0.627264888043406,1.74690050996942,2.02296519577231,3.2234847732881,3.40282724579238,10.4988128366352,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,3.37828455812128,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0 | ||
|short_description=p4@Nadk | |||
}} | }} |
Latest revision as of 20:02, 26 September 2015
Short description: | p4@Nadk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nadk_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | 90bp_to_uc008wdv.2_5end |
EntrezGene: | Nadk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.62e-12 | 3 |
epithelial cell of tracheobronchial tree | 1.62e-12 | 3 |
branched duct epithelial cell | 1.62e-12 | 3 |
epithelial cell of lower respiratory tract | 1.62e-12 | 3 |
respiratory epithelial cell | 1.62e-12 | 3 |
tracheal epithelial cell | 1.62e-12 | 3 |
tracheoblast | 1.62e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.62e-12 | 3 |
respiratory airway | 1.62e-12 | 3 |
tracheobronchial tree | 1.62e-12 | 3 |
lower respiratory tract | 1.62e-12 | 3 |
ileal mucosa | 4.91e-11 | 3 |
ileum | 4.91e-11 | 3 |
mucosa of small intestine | 4.91e-11 | 3 |
wall of small intestine | 4.91e-11 | 3 |
mucosa | 1.54e-10 | 15 |
gastrointestinal system | 1.65e-10 | 47 |
small intestine | 2.14e-08 | 4 |
adult organism | 5.33e-08 | 51 |
gut-associated lymphoid tissue | 7.88e-08 | 2 |
mucosa-associated lymphoid tissue | 7.88e-08 | 2 |
lymphoid tissue | 7.88e-08 | 2 |
stomach | 7.90e-08 | 16 |
food storage organ | 7.90e-08 | 16 |
digestive system | 7.99e-08 | 116 |
digestive tract | 7.99e-08 | 116 |
primitive gut | 7.99e-08 | 116 |
endoderm-derived structure | 1.25e-07 | 118 |
endoderm | 1.25e-07 | 118 |
presumptive endoderm | 1.25e-07 | 118 |