FFCP PHASE1:Mm9::chr9:51573409..51573422,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=244867 | |EntrezGene=244867 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENSMUST00000124907_5end | |association_with_transcript=-19bp_to_ENSMUST00000124907_5end | ||
|cluster_id=chr9:51573409..51573422,+ | |||
|description=CAGE_peak_2_at_Arhgap20_5end | |description=CAGE_peak_2_at_Arhgap20_5end | ||
|id=chr9:51573409..51573422,+ | |id=chr9:51573409..51573422,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.54e-09!23;CL:0000337!4.54e-09!23 | |ontology_enrichment_celltype=CL:0000117!4.54e-09!23;CL:0000337!4.54e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-11,23;CL:0000337,4.92e-11,23;CL:0000540,7.97e-08,33;CL:0000047,7.97e-08,33;CL:0000031,7.97e-08,33;CL:0000404,7.97e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.48e-18!52;UBERON:0005068!2.48e-18!52;UBERON:0006241!2.48e-18!52;UBERON:0007135!2.48e-18!52;UBERON:0000955!3.04e-17!50;UBERON:0006238!3.04e-17!50;UBERON:0001017!9.10e-17!73;UBERON:0005743!9.10e-17!73;UBERON:0002616!1.36e-16!49;UBERON:0000073!3.61e-16!75;UBERON:0001016!3.61e-16!75;UBERON:0002020!2.11e-15!34;UBERON:0000033!5.56e-14!63;UBERON:0002346!2.08e-13!71;UBERON:0003075!2.08e-13!71;UBERON:0007284!2.08e-13!71;UBERON:0003080!3.40e-13!40;UBERON:0004121!3.53e-13!102;UBERON:0000924!3.53e-13!102;UBERON:0006601!3.53e-13!102;UBERON:0002780!1.27e-12!39;UBERON:0001890!1.27e-12!39;UBERON:0006240!1.27e-12!39;UBERON:0002791!1.81e-12!29;UBERON:0003528!1.81e-12!29;UBERON:0001893!1.81e-12!29;UBERON:0003056!5.26e-11!49;UBERON:0002021!1.67e-08!10;UBERON:0000411!1.67e-08!10;UBERON:0001950!1.67e-08!10;UBERON:0000956!2.35e-08!21;UBERON:0001869!2.35e-08!21;UBERON:0000203!2.35e-08!21;UBERON:0002619!1.31e-07!17;UBERON:0007811!3.64e-07!86;UBERON:0000153!9.44e-07!94 | |ontology_enrichment_uberon=UBERON:0001049!2.48e-18!52;UBERON:0005068!2.48e-18!52;UBERON:0006241!2.48e-18!52;UBERON:0007135!2.48e-18!52;UBERON:0000955!3.04e-17!50;UBERON:0006238!3.04e-17!50;UBERON:0001017!9.10e-17!73;UBERON:0005743!9.10e-17!73;UBERON:0002616!1.36e-16!49;UBERON:0000073!3.61e-16!75;UBERON:0001016!3.61e-16!75;UBERON:0002020!2.11e-15!34;UBERON:0000033!5.56e-14!63;UBERON:0002346!2.08e-13!71;UBERON:0003075!2.08e-13!71;UBERON:0007284!2.08e-13!71;UBERON:0003080!3.40e-13!40;UBERON:0004121!3.53e-13!102;UBERON:0000924!3.53e-13!102;UBERON:0006601!3.53e-13!102;UBERON:0002780!1.27e-12!39;UBERON:0001890!1.27e-12!39;UBERON:0006240!1.27e-12!39;UBERON:0002791!1.81e-12!29;UBERON:0003528!1.81e-12!29;UBERON:0001893!1.81e-12!29;UBERON:0003056!5.26e-11!49;UBERON:0002021!1.67e-08!10;UBERON:0000411!1.67e-08!10;UBERON:0001950!1.67e-08!10;UBERON:0000956!2.35e-08!21;UBERON:0001869!2.35e-08!21;UBERON:0000203!2.35e-08!21;UBERON:0002619!1.31e-07!17;UBERON:0007811!3.64e-07!86;UBERON:0000153!9.44e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.68e-26,54;UBERON:0001049,7.17e-24,52;UBERON:0005068,7.17e-24,52;UBERON:0006241,7.17e-24,52;UBERON:0007135,7.17e-24,52;UBERON:0001017,5.19e-23,73;UBERON:0002020,2.55e-22,34;UBERON:0001016,5.20e-22,75;UBERON:0000955,4.03e-19,47;UBERON:0006238,4.03e-19,47;UBERON:0002616,4.12e-18,46;UBERON:0003528,2.71e-17,29;UBERON:0002791,2.71e-17,29;UBERON:0001893,2.71e-17,29;UBERON:0002346,4.17e-17,64;UBERON:0003075,4.17e-17,64;UBERON:0007284,4.17e-17,64;UBERON:0003080,9.98e-16,40;UBERON:0002780,8.06e-15,39;UBERON:0001890,8.06e-15,39;UBERON:0006240,8.06e-15,39;UBERON:0004121,2.07e-14,95;UBERON:0000924,2.07e-14,95;UBERON:0006601,2.07e-14,95;UBERON:0010371,2.15e-14,73;UBERON:0002021,6.46e-14,10;UBERON:0000411,6.46e-14,10;UBERON:0001950,6.46e-14,10;UBERON:0003056,2.86e-11,49;UBERON:0010314,3.75e-11,92;UBERON:0000956,2.39e-10,21;UBERON:0001869,2.39e-10,21;UBERON:0000203,2.39e-10,21;UBERON:0002619,3.44e-10,17;UBERON:0003076,4.71e-09,12;UBERON:0003057,4.71e-09,12;UBERON:0002420,1.15e-08,8;UBERON:0007245,1.15e-08,8;UBERON:0010009,1.15e-08,8;UBERON:0010011,1.15e-08,8;UBERON:0000454,1.15e-08,8;UBERON:0000991,2.48e-08,18;UBERON:0005564,2.48e-08,18;UBERON:0004176,1.23e-07,17;UBERON:0009196,1.23e-07,17;UBERON:0009117,1.23e-07,17;UBERON:0002240,1.66e-07,6;UBERON:0005174,1.66e-07,6;UBERON:0001137,1.66e-07,6;UBERON:0000025,2.31e-07,114;UBERON:0000473,6.77e-07,14 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,1.03298658753261,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.506884656097573,0,0.782391344348039,0,0,0.58328969722285,0.419959264876088,0,0,0,0,0.514518872071894,0.286533439938757,0,1.82084814773638,0.528990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0.898800331555214,0,0.518448061542388,0.405017814995072,1.47227472945967,3.42781181284564,2.87129103237098,0.979926393719632,0.958454710182364,0,5.50579404996943,5.10749352340751,3.84016333140609,2.37395317914349,2.19570344645783,1.04182674111352,2.79182999001381,2.8138130501584,5.50073691996516,6.18720029494702,5.83723891276322,3.35519002485541,0,0.529000920747499,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.452167921657868,1.52865319276416,0,0,0.289198713839823,0,0.970601099684455,0.441683036920787,0,0,7.61230072230023,3.97948742945565,0,0,0,0,4.34392854273986,10.980014467647,4.64921102817598,10.9509321721134,9.71718737855256,3.74018480207208,5.19172041816825,1.52759045775474,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,0.95251098811859,0.640568601424249,0.374806898238915,0,0,0.756424320671277,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,1.79130840136644,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0.656669856316381,0.972825714550269,1.16959989940266,0.658650345873152,1.47627060636409,9.04246778825747,4.93942139420565,0,0,0.213288250535234,0.928946687441754,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.823494773620054,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0.387904974335251,0.210407459670956,0,0,0.31399745568275,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.947457058852424,0.488894929326078,0.848725428875941,0.704070744865506,0.335012514883631,0.714130922658041,0.780534591431195,0.945810864637146,1.55025282754142,0.797273843287435,1.14704320301017,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.551873492609465,3.53211297973142,2.46144541843627,0,0.252470927204373,0.315508219416257,0,0,0.238968797952552,1.11399337041197,0,0,0.292255857911312,0,7.06906896127976,0.425820255624806,1.6025904330053,2.28041743095006,0.659880491890142,0,0.485561272309963,0.302323556964751,0.188605079755898,0.885905678642318,0.307435147943927,0.258428293168221,0,0.712994756769443,0.632073515871632,0,2.06271086496374,0,0.18006109403131,0.388076051348264,0.643011105094777,1.41872186913819,0.713475270408282,0.987294123612726,0.304464949114599,0.23467170806371,0,0.220528398054962,0.8244312647074,0.484393280087717,0.663442174209714,0.358117032009409,0.328281799490123,0.291480836629851,4.07935664423121,0,1.03193433981611,0.740778109478847,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.627264888043406,0.655087691238533,0.809186078308924,0.41326727862668,0,0.259229946583586,0,1.69107881605257,0.598066184175915,1.98550188548517,1.94451188344048,2.19571699912143,3.71703476079712,3.28600268208111,1.17183946359555,1.67774951081137,1.44950472495604,1.44015003128933,0,0.405450430580328,0.410843828659309,0.129920822977795,0,0.198681354781265,0.120195449519969,0.295379054349154,0,0.0762068066549998,0.302478555410522,0.292373642219257,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0.772758376128762,0.563047426353546,0.549454872801795,0,0.501572104035363,7.90652579663893,10.1271552031579,10.8850147553485,13.9201077698387,9.59115527678899,17.3740596399631,8.10027000278167,13.5096360967266,13.1411298605419,13.4617681055473,0.207574695168353,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,1.2869045591501,0.888986911206461,0.618105171716683,0.64183841918363,1.76888048234658,1.01391719956096,0.943131706930381,1.03005658216871,1.02440243847791,1.14870937911227,0.952587382566147,1.27472758539341,0.964546102318525,2.06042950401653,1.61918812147837,1.71434626192708,1.59728225543404,1.43061713968393,0.872078499793971,0.752875043322645,1.09998990259179,0.73171189149109,0.789209134313529,1.62964936615034,0,0.830445126869219,1.28055827088233,0.818462086339379,1.23949472948773,0.578719832943424,1.49886346762768,0.701794825336225,0.429742108096597,0.956441660344217,0.661774257358546,0.231867835620421 | |phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,1.03298658753261,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.506884656097573,0,0.782391344348039,0,0,0.58328969722285,0.419959264876088,0,0,0,0,0.514518872071894,0.286533439938757,0,1.82084814773638,0.528990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0.898800331555214,0,0.518448061542388,0.405017814995072,1.47227472945967,3.42781181284564,2.87129103237098,0.979926393719632,0.958454710182364,0,5.50579404996943,5.10749352340751,3.84016333140609,2.37395317914349,2.19570344645783,1.04182674111352,2.79182999001381,2.8138130501584,5.50073691996516,6.18720029494702,5.83723891276322,3.35519002485541,0,0.529000920747499,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.452167921657868,1.52865319276416,0,0,0.289198713839823,0,0.970601099684455,0.441683036920787,0,0,7.61230072230023,3.97948742945565,0,0,0,0,4.34392854273986,10.980014467647,4.64921102817598,10.9509321721134,9.71718737855256,3.74018480207208,5.19172041816825,1.52759045775474,0.124406970610093,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0.30140963567143,0.95251098811859,0.640568601424249,0.374806898238915,0,0,0.756424320671277,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,1.79130840136644,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0.656669856316381,0.972825714550269,1.16959989940266,0.658650345873152,1.47627060636409,9.04246778825747,4.93942139420565,0,0,0.213288250535234,0.928946687441754,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.823494773620054,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0.387904974335251,0.210407459670956,0,0,0.31399745568275,0,0,0,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.947457058852424,0.488894929326078,0.848725428875941,0.704070744865506,0.335012514883631,0.714130922658041,0.780534591431195,0.945810864637146,1.55025282754142,0.797273843287435,1.14704320301017,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.551873492609465,3.53211297973142,2.46144541843627,0,0.252470927204373,0.315508219416257,0,0,0.238968797952552,1.11399337041197,0,0,0.292255857911312,0,7.06906896127976,0.425820255624806,1.6025904330053,2.28041743095006,0.659880491890142,0,0.485561272309963,0.302323556964751,0.188605079755898,0.885905678642318,0.307435147943927,0.258428293168221,0,0.712994756769443,0.632073515871632,0,2.06271086496374,0,0.18006109403131,0.388076051348264,0.643011105094777,1.41872186913819,0.713475270408282,0.987294123612726,0.304464949114599,0.23467170806371,0,0.220528398054962,0.8244312647074,0.484393280087717,0.663442174209714,0.358117032009409,0.328281799490123,0.291480836629851,4.07935664423121,0,1.03193433981611,0.740778109478847,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.627264888043406,0.655087691238533,0.809186078308924,0.41326727862668,0,0.259229946583586,0,1.69107881605257,0.598066184175915,1.98550188548517,1.94451188344048,2.19571699912143,3.71703476079712,3.28600268208111,1.17183946359555,1.67774951081137,1.44950472495604,1.44015003128933,0,0.405450430580328,0.410843828659309,0.129920822977795,0,0.198681354781265,0.120195449519969,0.295379054349154,0,0.0762068066549998,0.302478555410522,0.292373642219257,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0.772758376128762,0.563047426353546,0.549454872801795,0,0.501572104035363,7.90652579663893,10.1271552031579,10.8850147553485,13.9201077698387,9.59115527678899,17.3740596399631,8.10027000278167,13.5096360967266,13.1411298605419,13.4617681055473,0.207574695168353,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,1.2869045591501,0.888986911206461,0.618105171716683,0.64183841918363,1.76888048234658,1.01391719956096,0.943131706930381,1.03005658216871,1.02440243847791,1.14870937911227,0.952587382566147,1.27472758539341,0.964546102318525,2.06042950401653,1.61918812147837,1.71434626192708,1.59728225543404,1.43061713968393,0.872078499793971,0.752875043322645,1.09998990259179,0.73171189149109,0.789209134313529,1.62964936615034,0,0.830445126869219,1.28055827088233,0.818462086339379,1.23949472948773,0.578719832943424,1.49886346762768,0.701794825336225,0.429742108096597,0.956441660344217,0.661774257358546,0.231867835620421 | ||
|short_description=p2@Arhgap20 | |short_description=p2@Arhgap20 | ||
}} | }} |
Latest revision as of 19:51, 26 September 2015
Short description: | p2@Arhgap20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgap20_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -19bp_to_ENSMUST00000124907_5end |
EntrezGene: | Arhgap20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.92e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.92e-11 | 23 |
neuron | 7.97e-08 | 33 |
neuronal stem cell | 7.97e-08 | 33 |
neuroblast | 7.97e-08 | 33 |
electrically signaling cell | 7.97e-08 | 33 |