FFCP PHASE1:Mm9::chr15:52543942..52543949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69790 | |EntrezGene=69790 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQI9 | |UniProt=Q9CQI9 | ||
|association_with_transcript=-50bp_to_ENSMUST00000037115,NM_027212,uc007vrg.1_5end | |association_with_transcript=-50bp_to_ENSMUST00000037115,NM_027212,uc007vrg.1_5end | ||
|cluster_id=chr15:52543942..52543949,+ | |||
|description=CAGE_peak_3_at_Med30_5end | |description=CAGE_peak_3_at_Med30_5end | ||
|id=chr15:52543942..52543949,+ | |id=chr15:52543942..52543949,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.01e-11!102;UBERON:0000924!5.01e-11!102;UBERON:0006601!5.01e-11!102;UBERON:0002346!1.43e-09!71;UBERON:0003075!1.43e-09!71;UBERON:0007284!1.43e-09!71;UBERON:0000033!4.90e-08!63;UBERON:0000073!7.54e-08!75;UBERON:0001016!7.54e-08!75;UBERON:0001017!9.68e-08!73;UBERON:0005743!9.68e-08!73;UBERON:0001049!1.09e-07!52;UBERON:0005068!1.09e-07!52;UBERON:0006241!1.09e-07!52;UBERON:0007135!1.09e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.99e-10,92;UBERON:0002346,1.16e-09,64;UBERON:0003075,1.16e-09,64;UBERON:0007284,1.16e-09,64;UBERON:0010371,3.52e-09,73;UBERON:0001049,4.00e-09,52;UBERON:0005068,4.00e-09,52;UBERON:0006241,4.00e-09,52;UBERON:0007135,4.00e-09,52;UBERON:0004121,4.56e-09,95;UBERON:0000924,4.56e-09,95;UBERON:0006601,4.56e-09,95;UBERON:0001017,9.50e-09,73;UBERON:0001016,2.61e-08,75;UBERON:0003076,3.98e-08,12;UBERON:0003057,3.98e-08,12;UBERON:0000073,1.06e-07,54;UBERON:0000955,1.70e-07,47;UBERON:0006238,1.70e-07,47;UBERON:0002616,7.65e-07,46 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0.30246421130683,0,0.503637815735669,0.934450562382103,0.129123323441576,0,0.234064526321993,0.856089841127525,1.03703806693937,1.02720437958723,0.524522414513984,0.999329285446988,1.21485160433896,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.765389611359628,0.695036658406197,0,0.159992422793407,0.45881856213434,1.14846392823004,0,0.430942465371778,0.570070258369122,0.252030129759931,0.665191531965914,0.635030673459631,0.61506478758457,0,1.1554064790051,0.831173226792462,0.408338712524738,0.837063261473815,0,0.523523743973798,1.76469446409304,0.683045484958446,0.485510353031154,0.881277725829041,1.01376931219515,0.734187008646726,1.56478268869608,0.436050312760893,1.09843091367236,1.36100929351998,0.55994568650145,1.43752564364972,0.167782606057736,0,0.336093799142464,0.514518872071894,0.286533439938757,1.54701627683233,0.809265843438391,2.64495489636016,1.90149421051854,0.677689064138264,0.889294796111139,0.899899717281399,0,0.7104801149461,0.299600110518405,2.30530983192933,0.725827286159344,0.540023753326763,0.841299845405528,1.42825492201902,0.883474163806454,0.367472397644862,0.958454710182364,0,0,0.383062014255563,0.768032666281217,0.527545150920775,0.548925861614458,1.04182674111352,0.837548997004143,2.8138130501584,1.68078072554491,1.76777151284201,0.427115042397309,1.67759501242771,0.757261933331841,0.68014404096107,0.579728977403356,0,0,0,0,0.448026887097336,0,1.1930122580464,1.03914401841148,0.70667914902068,1.26759077799012,0,0,0,0.649473123033642,1.01343946190039,0,0.22836775943812,0.258937883647172,1.1875371125186,0.520455980298408,2.43572382649713,0.922461989024234,1.65794904607885,0.823120949949934,0.502666365318702,0,1.01219549843938,0,0,1.10420759230197,1.45462575940567,1.86391761218122,1.46390398505774,1.04723353406728,0,0.718890747035522,1.19980546198682,0.762421362438388,1.3481157546434,1.37250180845588,2.1361239859187,0.521472960576829,0.767146371990992,2.28566849015516,0.811206315338788,0.509196819251581,0.248813941220186,1.26361379216837,0.420883711772948,1.17108398666433,1.14951052216736,0.720248519221397,1.50704817835715,0.748401490664606,0.512454881139399,0.937017245597288,1.55222022443409,0.215567992932842,0.189106080167819,0.703804496655795,0.43839146485515,0.278047249225598,0,0.823128545631774,0,0,0,0,0.828503090142008,0.938104239924385,0.720248245844059,0.473489471170421,0.983821158737019,0.771335564436891,0.465067889500816,0.536546802799238,1.63471479314037,0.822799249567402,1.14917224855367,0.891756905004413,1.31579988682799,0.439100230582101,0.805238512562231,1.47202963994889,0.720332286654991,0.330418782983798,1.05780226665418,0.853153002140936,0.232236671860439,0.38660238396628,0.403367049246685,0,0.951128130562796,0,0.823494773620054,1.00534083520108,0.198956472041151,0.19496408711912,0,0.648414149624083,0.398282546508734,0.758671603812327,0.913988100877831,0,0.407302655690628,0.581857461502877,0.420814919341911,0.948548056863859,0.295220295959204,0.627994911365499,0.370191491765402,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0,0.739012760666419,0.189491411770485,0,0,0.469380496577004,0.670025029767263,0.714130922658041,0.585400943573396,1.10344600874334,0.8858587585951,0.637819074629948,0.327726629431476,0.172684981865896,0.578596234326046,0,0.54390568381871,0,0,1.60550589987792,1.05490517932983,0.163934945376675,0.252470927204373,0.631016438832513,0,0.215423397732799,0.716906393857656,0.222798674082394,0.849229592366497,0.809621403349789,0.292255857911312,0.790575555893047,1.28528526568723,0.425820255624806,0.178065603667255,0.651547837414304,0.329940245945071,0,0.485561272309963,0.302323556964751,0.754420319023592,1.18120757152309,0.307435147943927,1.29214146584111,0.363533729477506,0.712994756769443,0.632073515871632,0,2.06271086496374,1.02131881726136,0.720244376125241,0.517434735131018,0.643011105094777,0.532020700926821,0.178368817602071,0.493647061806363,1.2178597964584,0.704015124191131,0.847328283455281,0.441056796109924,1.15420377059036,0.968786560175433,0.784068024066026,0.835606408021955,0.820704498725306,0.291480836629851,1.11255181206306,0,0.412773735926445,0.555583582109135,0.565105371014073,0.27338845544205,0.915112692826091,0.169978429993855,0.139951452323658,0.690999869022119,0,0.158167996790568,0.609958401380546,0.216010681643603,0.627264888043406,0.655087691238533,0.674321731924103,0.578574190077352,0.523511883968059,0.259229946583586,0.621339313086926,0.56369293868419,0.299033092087958,0.992750942742586,0.194451188344048,0.516639293910924,0.337912250981556,0.938857909166032,0.39061315453185,0.838874755405687,0.241584120826006,0.576060012515731,0,0.405450430580328,0.718976700153791,0,0.179026695667481,0.993406773906324,0.600977247599844,0.295379054349154,1.110630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|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0.30246421130683,0,0.503637815735669,0.934450562382103,0.129123323441576,0,0.234064526321993,0.856089841127525,1.03703806693937,1.02720437958723,0.524522414513984,0.999329285446988,1.21485160433896,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.765389611359628,0.695036658406197,0,0.159992422793407,0.45881856213434,1.14846392823004,0,0.430942465371778,0.570070258369122,0.252030129759931,0.665191531965914,0.635030673459631,0.61506478758457,0,1.1554064790051,0.831173226792462,0.408338712524738,0.837063261473815,0,0.523523743973798,1.76469446409304,0.683045484958446,0.485510353031154,0.881277725829041,1.01376931219515,0.734187008646726,1.56478268869608,0.436050312760893,1.09843091367236,1.36100929351998,0.55994568650145,1.43752564364972,0.167782606057736,0,0.336093799142464,0.514518872071894,0.286533439938757,1.54701627683233,0.809265843438391,2.64495489636016,1.90149421051854,0.677689064138264,0.889294796111139,0.899899717281399,0,0.7104801149461,0.299600110518405,2.30530983192933,0.725827286159344,0.540023753326763,0.841299845405528,1.42825492201902,0.883474163806454,0.367472397644862,0.958454710182364,0,0,0.383062014255563,0.768032666281217,0.527545150920775,0.548925861614458,1.04182674111352,0.837548997004143,2.8138130501584,1.68078072554491,1.76777151284201,0.427115042397309,1.67759501242771,0.757261933331841,0.68014404096107,0.579728977403356,0,0,0,0,0.448026887097336,0,1.1930122580464,1.03914401841148,0.70667914902068,1.26759077799012,0,0,0,0.649473123033642,1.01343946190039,0,0.22836775943812,0.258937883647172,1.1875371125186,0.520455980298408,2.43572382649713,0.922461989024234,1.65794904607885,0.823120949949934,0.502666365318702,0,1.01219549843938,0,0,1.10420759230197,1.45462575940567,1.86391761218122,1.46390398505774,1.04723353406728,0,0.718890747035522,1.19980546198682,0.762421362438388,1.3481157546434,1.37250180845588,2.1361239859187,0.521472960576829,0.767146371990992,2.28566849015516,0.811206315338788,0.509196819251581,0.248813941220186,1.26361379216837,0.420883711772948,1.17108398666433,1.14951052216736,0.720248519221397,1.50704817835715,0.748401490664606,0.512454881139399,0.937017245597288,1.55222022443409,0.215567992932842,0.189106080167819,0.703804496655795,0.43839146485515,0.278047249225598,0,0.823128545631774,0,0,0,0,0.828503090142008,0.938104239924385,0.720248245844059,0.473489471170421,0.983821158737019,0.771335564436891,0.465067889500816,0.536546802799238,1.63471479314037,0.822799249567402,1.14917224855367,0.891756905004413,1.31579988682799,0.439100230582101,0.805238512562231,1.47202963994889,0.720332286654991,0.330418782983798,1.05780226665418,0.853153002140936,0.232236671860439,0.38660238396628,0.403367049246685,0,0.951128130562796,0,0.823494773620054,1.00534083520108,0.198956472041151,0.19496408711912,0,0.648414149624083,0.398282546508734,0.758671603812327,0.913988100877831,0,0.407302655690628,0.581857461502877,0.420814919341911,0.948548056863859,0.295220295959204,0.627994911365499,0.370191491765402,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0,0.739012760666419,0.189491411770485,0,0,0.469380496577004,0.670025029767263,0.714130922658041,0.585400943573396,1.10344600874334,0.8858587585951,0.637819074629948,0.327726629431476,0.172684981865896,0.578596234326046,0,0.54390568381871,0,0,1.60550589987792,1.05490517932983,0.163934945376675,0.252470927204373,0.631016438832513,0,0.215423397732799,0.716906393857656,0.222798674082394,0.849229592366497,0.809621403349789,0.292255857911312,0.790575555893047,1.28528526568723,0.425820255624806,0.178065603667255,0.651547837414304,0.329940245945071,0,0.485561272309963,0.302323556964751,0.754420319023592,1.18120757152309,0.307435147943927,1.29214146584111,0.363533729477506,0.712994756769443,0.632073515871632,0,2.06271086496374,1.02131881726136,0.720244376125241,0.517434735131018,0.643011105094777,0.532020700926821,0.178368817602071,0.493647061806363,1.2178597964584,0.704015124191131,0.847328283455281,0.441056796109924,1.15420377059036,0.968786560175433,0.784068024066026,0.835606408021955,0.820704498725306,0.291480836629851,1.11255181206306,0,0.412773735926445,0.555583582109135,0.565105371014073,0.27338845544205,0.915112692826091,0.169978429993855,0.139951452323658,0.690999869022119,0,0.158167996790568,0.609958401380546,0.216010681643603,0.627264888043406,0.655087691238533,0.674321731924103,0.578574190077352,0.523511883968059,0.259229946583586,0.621339313086926,0.56369293868419,0.299033092087958,0.992750942742586,0.194451188344048,0.516639293910924,0.337912250981556,0.938857909166032,0.39061315453185,0.838874755405687,0.241584120826006,0.576060012515731,0,0.405450430580328,0.718976700153791,0,0.179026695667481,0.993406773906324,0.600977247599844,0.295379054349154,1.110630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| ||
|short_description=p3@Med30 | |short_description=p3@Med30 | ||
}} | }} |
Latest revision as of 19:50, 26 September 2015
Short description: | p3@Med30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Med30_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENSMUST00000037115, NM_027212, uc007vrg.1_5end |
EntrezGene: | Med30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.99e-10 | 92 |
neurectoderm | 1.16e-09 | 64 |
neural plate | 1.16e-09 | 64 |
presumptive neural plate | 1.16e-09 | 64 |
ecto-epithelium | 3.52e-09 | 73 |
neural tube | 4.00e-09 | 52 |
neural rod | 4.00e-09 | 52 |
future spinal cord | 4.00e-09 | 52 |
neural keel | 4.00e-09 | 52 |
ectoderm-derived structure | 4.56e-09 | 95 |
ectoderm | 4.56e-09 | 95 |
presumptive ectoderm | 4.56e-09 | 95 |
central nervous system | 9.50e-09 | 73 |
nervous system | 2.61e-08 | 75 |
posterior neural tube | 3.98e-08 | 12 |
chordal neural plate | 3.98e-08 | 12 |
regional part of nervous system | 1.06e-07 | 54 |
brain | 1.70e-07 | 47 |
future brain | 1.70e-07 | 47 |
regional part of brain | 7.65e-07 | 46 |