FFCP PHASE1:Mm9::chr17:67703864..67703877,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19274 | |EntrezGene=19274 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=577 | |||
|TSSclassifier=NA | |||
|UniProt=P28828,Q68FM4,Q6PDN0 | |UniProt=P28828,Q68FM4,Q6PDN0 | ||
|association_with_transcript=-65bp_to_ENSMUST00000037974,NM_008984,uc008dka.2,uc008dkb.2,uc012awj.1_5end | |association_with_transcript=-65bp_to_ENSMUST00000037974,NM_008984,uc008dka.2,uc008dkb.2,uc012awj.1_5end | ||
|cluster_id=chr17:67703864..67703877,- | |||
|description=CAGE_peak_2_at_Ptprm_5end | |description=CAGE_peak_2_at_Ptprm_5end | ||
|id=chr17:67703864..67703877,- | |id=chr17:67703864..67703877,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.96e-08!333;UBERON:0002048!2.48e-07!14;UBERON:0000117!2.48e-07!14;UBERON:0000171!2.48e-07!14;UBERON:0000170!2.48e-07!14;UBERON:0005597!2.48e-07!14;UBERON:0000118!2.48e-07!14;UBERON:0000479!5.90e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.38e-07,14;UBERON:0000117,3.38e-07,14;UBERON:0000171,3.38e-07,14;UBERON:0000170,3.38e-07,14;UBERON:0005597,3.38e-07,14;UBERON:0000118,3.38e-07,14 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,0,0,0,0.137114433605739,0,2.46625541438102,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0,5.16176953699867,3.34543873024398,2.20256102594018,0.782391344348039,0.872100625521786,1.5378032791413,1.94429899074283,1.25987779462826,1.43752564364972,0,0,0,1.02903774414379,3.43840127926508,5.67239301505187,1.61853168687678,1.05798195854407,0.633831403506179,0.677689064138264,1.77858959222228,1.3498495759221,2.96659908770092,4.2628806896766,1.79760066311043,1.53687322128622,0.725827286159344,0.405017814995072,0.630974884054146,2.28520787523043,1.32521124570968,0.61245399607477,1.15014565221884,0.919218786610021,5.50579404996943,2.29837208553338,1.53606533256243,0.659431438650969,0.640413505216868,1.04182674111352,3.62937898701795,1.12552522006336,2.29197371665215,3.24091444021034,3.55929201997757,1.4911955666024,1.21161909333094,1.81371744256285,4.92769630792852,1.72084775396277,0,0,1.29955283489534,0,1.26399978118577,3.74946709671727,2.59786004602869,2.47337702157238,0.845060518660083,3.84979432242953,0,7.11066703153331,0.649473123033642,0.506719730950197,0.505524445014783,1.02765491747154,0.517875767294343,2.3750742250372,0.867426633830679,1.82679286987285,0.691846491768175,1.80867168663147,1.64624189989987,2.63899841792318,1.73036477414062,6.65157041831594,0,4.20593809863264,3.97514733228708,3.87900202508178,0,3.51336956413857,2.30391377494801,2.55457055208591,0,0.599902730993408,0.381210681219194,1.19832511523858,1.83000241127451,2.51308704225729,2.43354048269187,1.79000820131231,2.0778804455956,2.27137768294861,2.24046600470696,2.73695335342205,1.76905930903572,0.631325567659422,1.43132487258974,0.919608417733892,1.98068342785884,2.10986744970001,1.97305847538851,1.40925092313335,1.49922759295566,3.62184719034622,0.215567992932842,1.70195472151037,2.11141348996739,1.09597866213787,3.89266148915837,4.87553033131033,3.49829631893504,2.18937693500343,0,0,0,1.65700618028402,0.938104239924385,0.720248245844059,1.89395788468168,1.57411385397923,2.46827380619805,3.72054311600653,2.95100741539581,3.97002164048376,6.25327429671226,8.04420573987567,9.48505071686512,10.2339991197733,7.68425403518677,10.7365135008297,1.68231958851302,0.92614151141356,0.991256348951394,0.793351699990633,1.2797295032114,1.62565670302307,1.67527699718721,1.81515172161008,1.77902435075896,1.71203063501303,0.474529061544512,1.64698954724011,2.76468729680296,2.58643413653496,1.55971269695296,2.69645822596266,1.08069024937347,0.995706366271836,1.51734320762465,2.74196430263349,5.63538678365402,1.83286195060783,1.74557238450863,3.92760591385784,5.1853960441891,3.39503340353085,1.72698600625512,1.85095745882701,0.296452627087149,0.333690211432188,1.37591296579242,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,1.43848068725405,0.162135226775035,1.37280706594041,7.18841032636773,1.48856379067401,1.87222603868736,1.76805214562978,1.07638448113147,2.41221760681684,9.79191907883005,0.947457058852424,2.44447464663039,2.37643120085263,3.52035372432753,9.38035041674168,8.33152743101048,8.58588050574315,11.6650006638581,13.0664166892777,15.3076577911188,11.1427054006702,12.7786886580763,10.8486793936134,0,0,1.96705709207614,1.93155722413313,2.24770825982909,1.99259867206745,1.3114795630134,4.03953483526997,1.89304931649754,3.12350995437311,2.36965737506079,3.82350076724083,5.34716817797746,3.96307143104365,2.83367491172426,1.46127928955656,3.95287777946523,8.67567554338879,2.6968616189571,1.6025904330053,4.0721739838394,2.8044920905331,3.98235415019888,1.21390318077491,0.906970670894253,0.754420319023592,2.06711325016541,4.30409207121498,2.84271122485043,3.63533729477506,2.85197902707777,3.16036757935816,1.05418608574999,1.03135543248187,1.70219802876894,2.16073312837572,0.646793418913773,2.35770738534752,1.24138163549592,1.96205699362278,2.30368628842969,2.74018454203139,1.17335854031855,2.33015277950202,0.441056796109924,2.30840754118072,4.03661066739764,3.01564624640779,2.626191568069,0.984845398470368,2.33184669303881,2.96680483216816,1.02522528478712,2.27025554759545,0.740778109478847,0.565105371014073,0.956859594047176,1.14389086603261,0.169978429993855,0,0,0,0.790839983952838,1.82987520414164,2.37611749807963,2.71814784818809,1.52853794622324,3.2367443132357,2.56225712748541,2.09404753587224,0.777689839750757,5.59205381778233,0,1.79419855252775,1.65458490457098,2.33341426012857,1.6790777052105,1.18269287843545,2.69921648885234,2.3436789271911,1.67774951081137,0,0.288030006257865,0.632022241256357,0.202725215290164,1.02710957164827,0.129920822977795,0.358053391334963,0.39736270956253,0.480781798079875,0.443068581523732,0.201932899896295,0.457240839929999,0.100826185136841,0.194915761479505,0.288635524920988,0,2.26730383615211,0.443971906748129,0,0,3.28422309854724,2.064507229963,2.93042598827624,0.643105137237198,1.00314420807073,1.12950368523413,1.84130094602871,2.86447756719698,1.71853182343688,2.05524755931193,2.2661816921691,0.675022500231806,1.80128481289688,2.26571204492102,3.62432218226274,0.103787347584177,2.39414924040619,2.39027048055788,1.94485373654635,0.419226325255965,0.735374033800057,2.889207461421,3.5025959730612,5.45562656306086,5.05394423527595,3.04175159868288,4.33840585187975,3.37109426891577,3.26528277264833,4.25022470271538,2.38146845641537,4.98302601562879,4.43691207066522,3.29668720642645,2.94397840268795,5.82877729055206,4.96932257246145,3.09967046931517,3.48831399917588,3.29382831453657,4.3153450024755,3.10977553883713,2.63069711437843,2.8518863907631,3.36685362994643,5.21994079746366,3.25064791839359,2.45538625901814,3.56354734727722,3.47231899766054,3.2475375131933,3.50897412668113,2.79332370262788,4.97349663378993,4.63241980150983,4.63735671240843 | |phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,0,0,0,0.137114433605739,0,2.46625541438102,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0,5.16176953699867,3.34543873024398,2.20256102594018,0.782391344348039,0.872100625521786,1.5378032791413,1.94429899074283,1.25987779462826,1.43752564364972,0,0,0,1.02903774414379,3.43840127926508,5.67239301505187,1.61853168687678,1.05798195854407,0.633831403506179,0.677689064138264,1.77858959222228,1.3498495759221,2.96659908770092,4.2628806896766,1.79760066311043,1.53687322128622,0.725827286159344,0.405017814995072,0.630974884054146,2.28520787523043,1.32521124570968,0.61245399607477,1.15014565221884,0.919218786610021,5.50579404996943,2.29837208553338,1.53606533256243,0.659431438650969,0.640413505216868,1.04182674111352,3.62937898701795,1.12552522006336,2.29197371665215,3.24091444021034,3.55929201997757,1.4911955666024,1.21161909333094,1.81371744256285,4.92769630792852,1.72084775396277,0,0,1.29955283489534,0,1.26399978118577,3.74946709671727,2.59786004602869,2.47337702157238,0.845060518660083,3.84979432242953,0,7.11066703153331,0.649473123033642,0.506719730950197,0.505524445014783,1.02765491747154,0.517875767294343,2.3750742250372,0.867426633830679,1.82679286987285,0.691846491768175,1.80867168663147,1.64624189989987,2.63899841792318,1.73036477414062,6.65157041831594,0,4.20593809863264,3.97514733228708,3.87900202508178,0,3.51336956413857,2.30391377494801,2.55457055208591,0,0.599902730993408,0.381210681219194,1.19832511523858,1.83000241127451,2.51308704225729,2.43354048269187,1.79000820131231,2.0778804455956,2.27137768294861,2.24046600470696,2.73695335342205,1.76905930903572,0.631325567659422,1.43132487258974,0.919608417733892,1.98068342785884,2.10986744970001,1.97305847538851,1.40925092313335,1.49922759295566,3.62184719034622,0.215567992932842,1.70195472151037,2.11141348996739,1.09597866213787,3.89266148915837,4.87553033131033,3.49829631893504,2.18937693500343,0,0,0,1.65700618028402,0.938104239924385,0.720248245844059,1.89395788468168,1.57411385397923,2.46827380619805,3.72054311600653,2.95100741539581,3.97002164048376,6.25327429671226,8.04420573987567,9.48505071686512,10.2339991197733,7.68425403518677,10.7365135008297,1.68231958851302,0.92614151141356,0.991256348951394,0.793351699990633,1.2797295032114,1.62565670302307,1.67527699718721,1.81515172161008,1.77902435075896,1.71203063501303,0.474529061544512,1.64698954724011,2.76468729680296,2.58643413653496,1.55971269695296,2.69645822596266,1.08069024937347,0.995706366271836,1.51734320762465,2.74196430263349,5.63538678365402,1.83286195060783,1.74557238450863,3.92760591385784,5.1853960441891,3.39503340353085,1.72698600625512,1.85095745882701,0.296452627087149,0.333690211432188,1.37591296579242,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,1.43848068725405,0.162135226775035,1.37280706594041,7.18841032636773,1.48856379067401,1.87222603868736,1.76805214562978,1.07638448113147,2.41221760681684,9.79191907883005,0.947457058852424,2.44447464663039,2.37643120085263,3.52035372432753,9.38035041674168,8.33152743101048,8.58588050574315,11.6650006638581,13.0664166892777,15.3076577911188,11.1427054006702,12.7786886580763,10.8486793936134,0,0,1.96705709207614,1.93155722413313,2.24770825982909,1.99259867206745,1.3114795630134,4.03953483526997,1.89304931649754,3.12350995437311,2.36965737506079,3.82350076724083,5.34716817797746,3.96307143104365,2.83367491172426,1.46127928955656,3.95287777946523,8.67567554338879,2.6968616189571,1.6025904330053,4.0721739838394,2.8044920905331,3.98235415019888,1.21390318077491,0.906970670894253,0.754420319023592,2.06711325016541,4.30409207121498,2.84271122485043,3.63533729477506,2.85197902707777,3.16036757935816,1.05418608574999,1.03135543248187,1.70219802876894,2.16073312837572,0.646793418913773,2.35770738534752,1.24138163549592,1.96205699362278,2.30368628842969,2.74018454203139,1.17335854031855,2.33015277950202,0.441056796109924,2.30840754118072,4.03661066739764,3.01564624640779,2.626191568069,0.984845398470368,2.33184669303881,2.96680483216816,1.02522528478712,2.27025554759545,0.740778109478847,0.565105371014073,0.956859594047176,1.14389086603261,0.169978429993855,0,0,0,0.790839983952838,1.82987520414164,2.37611749807963,2.71814784818809,1.52853794622324,3.2367443132357,2.56225712748541,2.09404753587224,0.777689839750757,5.59205381778233,0,1.79419855252775,1.65458490457098,2.33341426012857,1.6790777052105,1.18269287843545,2.69921648885234,2.3436789271911,1.67774951081137,0,0.288030006257865,0.632022241256357,0.202725215290164,1.02710957164827,0.129920822977795,0.358053391334963,0.39736270956253,0.480781798079875,0.443068581523732,0.201932899896295,0.457240839929999,0.100826185136841,0.194915761479505,0.288635524920988,0,2.26730383615211,0.443971906748129,0,0,3.28422309854724,2.064507229963,2.93042598827624,0.643105137237198,1.00314420807073,1.12950368523413,1.84130094602871,2.86447756719698,1.71853182343688,2.05524755931193,2.2661816921691,0.675022500231806,1.80128481289688,2.26571204492102,3.62432218226274,0.103787347584177,2.39414924040619,2.39027048055788,1.94485373654635,0.419226325255965,0.735374033800057,2.889207461421,3.5025959730612,5.45562656306086,5.05394423527595,3.04175159868288,4.33840585187975,3.37109426891577,3.26528277264833,4.25022470271538,2.38146845641537,4.98302601562879,4.43691207066522,3.29668720642645,2.94397840268795,5.82877729055206,4.96932257246145,3.09967046931517,3.48831399917588,3.29382831453657,4.3153450024755,3.10977553883713,2.63069711437843,2.8518863907631,3.36685362994643,5.21994079746366,3.25064791839359,2.45538625901814,3.56354734727722,3.47231899766054,3.2475375131933,3.50897412668113,2.79332370262788,4.97349663378993,4.63241980150983,4.63735671240843 | ||
|short_description=p2@Ptprm | |short_description=p2@Ptprm | ||
}} | }} |
Latest revision as of 19:34, 26 September 2015
Short description: | p2@Ptprm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptprm_5end |
Coexpression cluster: | MCL_coexpression_mm9:577 |
Association with transcript: | -65bp_to_ENSMUST00000037974, NM_008984, uc008dka.2, uc008dkb.2, uc012awj.1_5end |
EntrezGene: | Ptprm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 3.38e-07 | 14 |
respiratory tube | 3.38e-07 | 14 |
respiration organ | 3.38e-07 | 14 |
pair of lungs | 3.38e-07 | 14 |
lung primordium | 3.38e-07 | 14 |
lung bud | 3.38e-07 | 14 |