FFCP PHASE1:Mm9::chr4:154010313..154010324,-: Difference between revisions
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{{FFCP|EntrezGene=70673|HGNC=|UniProt=Q3UR05|association_with_transcript=150bp_to_uc008wby.1_5end|description=CAGE_peak_9_at_Prdm16_5end|id=chr4:154010313..154010324,-|ontology_enrichment_celltype=CL:0000221!3.99e-09!44;CL:0000133!3.99e-09!44;CL:0002319!1.69e-08!43|ontology_enrichment_celltype_v019_2=CL:0002453,2.59e-21,8;CL:0000333,7.08e-17,10;CL:0000095,7.08e-17,10;CL:0000243,7.08e-17,10;CL:0000123,7.08e-17,10;CL:0000125,7.08e-17,10;CL:0000030,7.08e-17,10;CL:0000339,7.08e-17,10;CL:0000128,6.15e-15,6;CL:0000126,6.15e-15,6;CL:0000127,6.15e-15,6;CL:0002605,1.92e-08,2;CL:0002604,1.92e-08,2;CL:0000878,4.00e-08,2;CL:0000129,4.00e-08,2;CL:0000221,5.30e-08,44;CL:0000133,5.30e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.41e-08,7;UBERON:0003022,2.41e-08,7;UBERON:0002421,2.41e-08,7;UBERON:0000349,2.41e-08,7;UBERON:0002600,2.41e-08,7|phase1_expression=0.80074423552397,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,5.01457859675027,1.75748946187577,2.91644848611425,1.1198913730029,1.43752564364972,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,1.19840044207362,3.45796474789399,0.414758449233911,0.540023753326763,1.89292465216244,0.571301968807607,0.883474163806454,0.489963196859816,0.670918297127655,1.83843757322004,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0.45839474333043,0.883885756421003,0.427115042397309,0.559198337475902,0.908714319998209,0.604572480854284,0,0,0,0,0,0,0.421333260395256,0,0,0,5.35204995151386,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0.587943535678524,0.376999773989026,0,1.15679485535929,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0,0,0.127070227073065,0.299581278809645,0,0.125654352112864,0.695297280769106,0.511430914660661,0,0.162241263067758,0.101839363850316,0.124406970610093,1.0108910337347,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,1.07783996466421,1.70195472151037,1.23165786914764,0.657587197282725,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0.393528463494808,0.617068451549513,1.39520366850245,0,1.5179494507732,1.15191894939436,0.985004784474571,0.729619285912702,0.877199924551994,0.439100230582101,0,1.05144974282064,0.514523061896422,0,0,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0.398282546508734,0.189667900953082,0.571242563048644,2.25415471346161,0.203651327845314,0,1.05203729835478,1.13825766823663,0.295220295959204,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0,0.8858587585951,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,1.41538265394416,0,0.292255857911312,0.395287777946524,0.642642632843614,0,0,0.162886959353576,0,0,0.728341908464944,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,0.258428293168221,0.727067458955011,1.42598951353889,0,0,0,0,0.18006109403131,0.388076051348264,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0.291480836629851,0.370850604021019,0,0.619160603889667,0.370389054739423,0,0,0,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0.813277868507395,0.108005340821801,0,0,0,0.495920734352016,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.830298780673413,0.399024873401031,0.341467211508268,0.243106717068294,0,0.367687016900028,0.44449345560323,0,0.320919209591815,0,0,0,0.280924522409647,0.320125762024346,0.34461281373368,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.407412341537585,1.68342681497322,0.118635018124174,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0.233931608445408,0.214871054048298,0,0.441182838239031,0|short_description=p9@Prdm16}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70673 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q3UR05 | |||
|association_with_transcript=150bp_to_uc008wby.1_5end | |||
|cluster_id=chr4:154010313..154010324,- | |||
|description=CAGE_peak_9_at_Prdm16_5end | |||
|id=chr4:154010313..154010324,- | |||
|ontology_enrichment_celltype=CL:0000221!3.99e-09!44;CL:0000133!3.99e-09!44;CL:0002319!1.69e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.59e-21,8;CL:0000333,7.08e-17,10;CL:0000095,7.08e-17,10;CL:0000243,7.08e-17,10;CL:0000123,7.08e-17,10;CL:0000125,7.08e-17,10;CL:0000030,7.08e-17,10;CL:0000339,7.08e-17,10;CL:0000128,6.15e-15,6;CL:0000126,6.15e-15,6;CL:0000127,6.15e-15,6;CL:0002605,1.92e-08,2;CL:0002604,1.92e-08,2;CL:0000878,4.00e-08,2;CL:0000129,4.00e-08,2;CL:0000221,5.30e-08,44;CL:0000133,5.30e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.41e-08,7;UBERON:0003022,2.41e-08,7;UBERON:0002421,2.41e-08,7;UBERON:0000349,2.41e-08,7;UBERON:0002600,2.41e-08,7 | |||
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,5.01457859675027,1.75748946187577,2.91644848611425,1.1198913730029,1.43752564364972,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,1.19840044207362,3.45796474789399,0.414758449233911,0.540023753326763,1.89292465216244,0.571301968807607,0.883474163806454,0.489963196859816,0.670918297127655,1.83843757322004,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0.45839474333043,0.883885756421003,0.427115042397309,0.559198337475902,0.908714319998209,0.604572480854284,0,0,0,0,0,0,0.421333260395256,0,0,0,5.35204995151386,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0.587943535678524,0.376999773989026,0,1.15679485535929,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0,0,0.127070227073065,0.299581278809645,0,0.125654352112864,0.695297280769106,0.511430914660661,0,0.162241263067758,0.101839363850316,0.124406970610093,1.0108910337347,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,1.07783996466421,1.70195472151037,1.23165786914764,0.657587197282725,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0,0.393528463494808,0.617068451549513,1.39520366850245,0,1.5179494507732,1.15191894939436,0.985004784474571,0.729619285912702,0.877199924551994,0.439100230582101,0,1.05144974282064,0.514523061896422,0,0,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0.398282546508734,0.189667900953082,0.571242563048644,2.25415471346161,0.203651327845314,0,1.05203729835478,1.13825766823663,0.295220295959204,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0,0,0.324270453550071,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0,0.8858587585951,0.318909537314974,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,1.41538265394416,0,0.292255857911312,0.395287777946524,0.642642632843614,0,0,0.162886959353576,0,0,0.728341908464944,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,0.258428293168221,0.727067458955011,1.42598951353889,0,0,0,0,0.18006109403131,0.388076051348264,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0.291480836629851,0.370850604021019,0,0.619160603889667,0.370389054739423,0,0,0,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0.813277868507395,0.108005340821801,0,0,0,0.495920734352016,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.830298780673413,0.399024873401031,0.341467211508268,0.243106717068294,0,0.367687016900028,0.44449345560323,0,0.320919209591815,0,0,0,0.280924522409647,0.320125762024346,0.34461281373368,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.407412341537585,1.68342681497322,0.118635018124174,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0.233931608445408,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p9@Prdm16 | |||
}} |
Latest revision as of 19:27, 26 September 2015
Short description: | p9@Prdm16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Prdm16_5end |
Coexpression cluster: | NA |
Association with transcript: | 150bp_to_uc008wby.1_5end |
EntrezGene: | Prdm16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.59e-21 | 8 |
migratory neural crest cell | 7.08e-17 | 10 |
neuron associated cell | 7.08e-17 | 10 |
glial cell (sensu Vertebrata) | 7.08e-17 | 10 |
neuron associated cell (sensu Vertebrata) | 7.08e-17 | 10 |
glial cell | 7.08e-17 | 10 |
glioblast | 7.08e-17 | 10 |
glioblast (sensu Vertebrata) | 7.08e-17 | 10 |
oligodendrocyte | 6.15e-15 | 6 |
macroglial cell | 6.15e-15 | 6 |
astrocyte | 6.15e-15 | 6 |
astrocyte of the cerebral cortex | 1.92e-08 | 2 |
astrocyte of the hippocampus | 1.92e-08 | 2 |
central nervous system macrophage | 4.00e-08 | 2 |
microglial cell | 4.00e-08 | 2 |
ectodermal cell | 5.30e-08 | 44 |
neurectodermal cell | 5.30e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.41e-08 | 7 |
lobe parts of cerebral cortex | 2.41e-08 | 7 |
hippocampal formation | 2.41e-08 | 7 |
limbic system | 2.41e-08 | 7 |
limbic lobe | 2.41e-08 | 7 |