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FFCP PHASE1:Mm9::chr6:129483201..129483223,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=57436
|EntrezGene=57436
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8R3R8
|UniProt=Q8R3R8
|association_with_transcript=0bp_to_ENSMUST00000032264,NM_020590,uc009efz.1_5end
|association_with_transcript=0bp_to_ENSMUST00000032264,NM_020590,uc009efz.1_5end
|cluster_id=chr6:129483201..129483223,+
|description=CAGE_peak_2_at_Gabarapl1_5end
|description=CAGE_peak_2_at_Gabarapl1_5end
|id=chr6:129483201..129483223,+
|id=chr6:129483201..129483223,+
|ontology_enrichment_celltype=CL:0000055!8.81e-15!50;CL:0000221!1.49e-12!44;CL:0000133!1.49e-12!44;CL:0002319!2.29e-12!43;CL:0000393!1.09e-11!39;CL:0000211!1.09e-11!39;CL:0000117!5.00e-10!23;CL:0000337!5.00e-10!23;CL:0000540!8.32e-10!33;CL:0000047!8.32e-10!33;CL:0000031!8.32e-10!33;CL:0000404!8.32e-10!33;CL:0002321!1.09e-08!70;CL:0000220!1.09e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000221,1.49e-12,44;CL:0000133,1.49e-12,44;CL:0002319,2.29e-12,43;CL:0000393,1.09e-11,39;CL:0000211,1.09e-11,39;CL:0000117,5.00e-10,23;CL:0000337,5.00e-10,23;CL:0000540,8.32e-10,33;CL:0000047,8.32e-10,33;CL:0000031,8.32e-10,33;CL:0000404,8.32e-10,33;CL:0002321,1.08e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.88e-26!75;UBERON:0001016!2.88e-26!75;UBERON:0001017!1.03e-25!73;UBERON:0005743!1.03e-25!73;UBERON:0004121!1.15e-23!102;UBERON:0000924!1.15e-23!102;UBERON:0006601!1.15e-23!102;UBERON:0000955!4.80e-21!50;UBERON:0006238!4.80e-21!50;UBERON:0001049!6.43e-21!52;UBERON:0005068!6.43e-21!52;UBERON:0006241!6.43e-21!52;UBERON:0007135!6.43e-21!52;UBERON:0002616!2.28e-20!49;UBERON:0000033!1.55e-19!63;UBERON:0004111!2.36e-19!122;UBERON:0002346!7.89e-19!71;UBERON:0003075!7.89e-19!71;UBERON:0007284!7.89e-19!71;UBERON:0000025!3.93e-18!114;UBERON:0002020!1.26e-16!34;UBERON:0003080!1.41e-15!40;UBERON:0002780!5.20e-15!39;UBERON:0001890!5.20e-15!39;UBERON:0006240!5.20e-15!39;UBERON:0002791!9.99e-15!29;UBERON:0003528!9.99e-15!29;UBERON:0001893!9.99e-15!29;UBERON:0003056!1.07e-13!49;UBERON:0000956!5.97e-11!21;UBERON:0001869!5.97e-11!21;UBERON:0000203!5.97e-11!21;UBERON:0002619!1.87e-09!17;UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.88e-26,75;UBERON:0001017,1.03e-25,73;UBERON:0004121,3.50e-23,95;UBERON:0000924,3.50e-23,95;UBERON:0006601,3.50e-23,95;UBERON:0000073,1.74e-22,54;UBERON:0001049,6.43e-21,52;UBERON:0005068,6.43e-21,52;UBERON:0006241,6.43e-21,52;UBERON:0007135,6.43e-21,52;UBERON:0004111,2.36e-19,122;UBERON:0000955,6.75e-19,47;UBERON:0006238,6.75e-19,47;UBERON:0002346,1.09e-18,64;UBERON:0003075,1.09e-18,64;UBERON:0007284,1.09e-18,64;UBERON:0002616,3.08e-18,46;UBERON:0000025,3.93e-18,114;UBERON:0002020,1.26e-16,34;UBERON:0010371,2.59e-16,73;UBERON:0010314,1.04e-15,92;UBERON:0003080,1.41e-15,40;UBERON:0002780,5.19e-15,39;UBERON:0001890,5.19e-15,39;UBERON:0006240,5.19e-15,39;UBERON:0003528,9.99e-15,29;UBERON:0002791,9.99e-15,29;UBERON:0001893,9.99e-15,29;UBERON:0003056,1.07e-13,49;UBERON:0000956,5.97e-11,21;UBERON:0001869,5.97e-11,21;UBERON:0000203,5.97e-11,21;UBERON:0002619,1.87e-09,17;UBERON:0002021,2.52e-07,10;UBERON:0000411,2.52e-07,10;UBERON:0001950,2.52e-07,10
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67861,7.12835249423888,7.10900206449194,9.38959024108564,9.03591120778299,17.1919187908699,17.0141362289619,18.79417112731,36.0376801590417,8.45539408026285,10.7651913151665,15.0567226315959,12.444876054019,17.1782565225382,17.2335248000594,16.195298933114,12.1090077904874,12.4782619866596,11.5960377996483,8.06484017522023,3.79213344753814,5.87903124341476,6.26536838705446,4.54722880422283,3.40150721768215,5.16571522431289,5.88957702647847,5.02144392393563,5.04832249740738,5.25826965919499,3.02478555410522,5.16526767920688,5.48407497349878,7.12949103307571,16.7780483875256,21.3106515239102,20.9033285900078,17.9636539509564,27.6261119466032,28.903101219482,18.3151624267265,9.86094543763703,30.0943262421218,63.2522063731115,61.6835816919617,83.6427449621519,100.877818035745,108.928120643532,89.8918737893744,81.0027000278167,86.4616710190503,74.7684974823938,82.8416498802912,9.44464863016008,4.38927360741134,9.21961471072325,7.29320151204882,7.75568701723535,10.6629234901008,8.22312892865976,7.62329711783909,7.38114182061175,9.34979683526051,6.08350319736575,6.79054828989874,9.64507526939789,11.1403765184473,9.9363361293211,10.0021675169445,11.4725482685407,12.1532808892134,6.59337441285291,7.21274708658547,11.3146853287187,9.22874192028555,13.1139904471027,6.97662799835177,10.4461412261017,8.20761696549262,9.87811053512972,8.15516105457313,12.4939784738193,4.48913817326191,7.59264115994714,10.2444661670586,9.82154503607254,10.0708946770878,10.0311437710194,12.9901500527732,10.7608539884888,11.6030369186081,11.8598765882683,13.4560765662904,12.2889952878823
|phase1_expression=19.5381593467849,9.42233600626275,9.09998478779072,6.35174843744343,10.5188103288733,5.37213670118047,8.41005506143892,2.96983643915625,1.68946466582,0.70219357896598,3.08192342805909,2.23362045186942,0.856003649656029,0.174840804837995,7.32841475994458,6.47920855647443,11.8925519281785,2.36596624018678,2.4680598049033,4.2438965179803,45.2430303603691,14.4964788753293,14.6271881917804,7.99962113967033,7.34109699414944,5.7423196411502,7.75371593086335,8.83432054012145,15.3918969759663,6.5527833737582,8.42575940490158,20.9560122241678,20.9122027778754,47.5445043046316,8.37669697278696,5.31950865147176,3.06254034393554,2.09265815368454,0.7813353445238,1.57057123192139,1.17646297606203,2.04913645487534,1.45653105909346,31.9777917657966,33.6571411648788,22.7597972680485,23.4717403304412,25.2909181401318,43.0584918159565,36.7472509250396,20.2980311356776,17.2503077237966,3.18786951509699,1.45072428402269,4.36921938885203,25.7259436035947,47.8510844697724,50.5358650431893,28.9312539029225,30.6814767977779,20.2826049121977,21.3472055203553,14.2287167377782,61.1931807751351,84.0536408181928,56.1279290807419,48.5352179039816,56.8643091875901,28.5146433848314,38.4766924245318,36.8068682364919,53.4167340835113,50.5788958779195,33.1950065872525,35.0794423926745,22.9804696652505,132.139057199266,105.725115934535,116.280145674976,33.6310033711994,37.7843968077952,28.129322010065,116.977676581579,127.18434986716,124.683370185877,32.1145158166298,33.8844600301865,28.519115211271,27.8672391466117,24.7119001549189,55.0742528533188,42.1607699720879,27.8788246820178,87.4319170453264,30.5394916200404,50.1790113549016,33.8471052517522,17.0430322578058,16.3665182899807,16.9602995764963,24.225068201589,12.8326477414318,5.09610479413291,0,9.74209684550464,8.86759529162845,8.59391556525132,38.137415826166,3.88406825470758,39.3371668521786,8.67426633830679,12.1786191324856,13.8369298353635,24.4170677695249,21.1659672844269,30.7883148757705,47.9558237404685,29.7874675255018,4.42305275974937,8.7354098971601,9.49618529379692,13.091631834651,9.31958806090611,45.9665851308129,50.2672096352292,7.91916871146633,25.1611761462433,16.197373736822,24.0162729168092,71.1505537172908,59.9325789692401,32.5444771972319,82.3927277711391,110.469077566703,87.4787667595748,82.9052854276242,21.3862664085664,15.9240922380919,18.9542068825256,25.6739064181498,8.97831056442656,12.644615743841,12.9644733459851,9.64510834148576,13.1990808353576,13.3238269096244,17.4285207681096,23.2833033665114,6.25147179505242,6.80781888604149,6.15828934573821,7.89104636739269,9.17555922444473,13.5818344943645,9.67176041117334,13.335295876839,8.42655824775882,9.77922047035918,13.0715209721973,7.87077935634907,7.73935997937617,10.4435995647389,9.46978942340841,7.67380503814875,8.02188987014367,6.27841650826101,10.7309360559848,12.0268302638185,8.22799249567402,13.6258995185649,17.99727571918,18.7135983904425,12.2948064562988,25.4992195644706,84.5365593227792,31.9004298375782,9.25172592354634,5.02456076660734,6.39864751605702,10.2184135618593,6.44337306610467,5.64713868945359,5.33707305227689,7.98947629672748,9.96511029243474,12.6818195137488,18.0961350336194,18.502951899827,12.2827374885046,9.88701349519644,11.4553166433588,18.7192796859105,10.2420666514664,7.42615331963237,13.5249282807697,10.7935203758017,15.1282939990748,19.4977579295086,22.7651533647326,33.6551137393493,38.9356845046609,47.3845109459714,38.2423888942422,6.50695912292767,7.27268281918851,7.64531182108503,6.6943840058206,9.40590923034426,7.89340140522401,11.5078454980324,17.0241988113787,17.0228076176611,41.6927798929328,33.8648262378338,18.0981850406445,34.6033062787543,39.8262258018645,48.7267956577001,38.4286635546538,6.82169082373745,4.88894929326078,10.0149600607361,8.21415869009757,8.04030035720716,10.7119638398706,24.0014386865093,11.9802709520705,18.1601045511995,19.7723913135284,32.1172096842846,24.5212674249572,41.8035779300568,25.6345182696763,16.3171705145613,12.2941068254759,10.4855963595798,90.0688809831513,94.7070427665002,23.1148272981112,14.6433137778536,14.5133780931478,12.8844785617891,21.7577631710127,17.9226598464414,19.3834846451683,17.5507449089076,19.8357243820698,24.8417479224615,23.3219788988449,88.6846833324187,20.5813123551989,19.9433476107326,19.8722090411363,23.4257574621,23.8941249011933,6.79785781233948,9.06970670894253,6.22396763194464,10.6308681437078,13.5271465095328,16.7978390559344,13.0872142611902,14.6163925137736,13.2735438333043,22.1379078007497,23.721174947083,54.8107765263599,9.18311579559682,11.3835641728824,10.0738406464848,16.1379612614469,23.0095774706671,26.6569413375436,32.5777495552621,18.3043932289694,37.70610861376,15.8780446599573,12.696241476494,8.23468576149118,6.51379589224083,13.0115854963419,10.833299383174,10.2018292820448,74.5409714082249,6.66396435111626,11.3512777379772,7.77817014952789,8.4765805652111,6.97140561377228,10.7525741407066,19.3775410192995,22.6721352764326,21.4209959396857,24.821436068393,5.06137589729817,5.89626454667861,7.12835249423888,7.10900206449194,9.38959024108564,9.03591120778299,17.1919187908699,17.0141362289619,18.79417112731,36.0376801590417,8.45539408026285,10.7651913151665,15.0567226315959,12.444876054019,17.1782565225382,17.2335248000594,16.195298933114,12.1090077904874,12.4782619866596,11.5960377996483,8.06484017522023,3.79213344753814,5.87903124341476,6.26536838705446,4.54722880422283,3.40150721768215,5.16571522431289,5.88957702647847,5.02144392393563,5.04832249740738,5.25826965919499,3.02478555410522,5.16526767920688,5.48407497349878,7.12949103307571,16.7780483875256,21.3106515239102,20.9033285900078,17.9636539509564,27.6261119466032,28.903101219482,18.3151624267265,9.86094543763703,30.0943262421218,63.2522063731115,61.6835816919617,83.6427449621519,100.877818035745,108.928120643532,89.8918737893744,81.0027000278167,86.4616710190503,74.7684974823938,82.8416498802912,9.44464863016008,4.38927360741134,9.21961471072325,7.29320151204882,7.75568701723535,10.6629234901008,8.22312892865976,7.62329711783909,7.38114182061175,9.34979683526051,6.08350319736575,6.79054828989874,9.64507526939789,11.1403765184473,9.9363361293211,10.0021675169445,11.4725482685407,12.1532808892134,6.59337441285291,7.21274708658547,11.3146853287187,9.22874192028555,13.1139904471027,6.97662799835177,10.4461412261017,8.20761696549262,9.87811053512972,8.15516105457313,12.4939784738193,4.48913817326191,7.59264115994714,10.2444661670586,9.82154503607254,10.0708946770878,10.0311437710194,12.9901500527732,10.7608539884888,11.6030369186081,11.8598765882683,13.4560765662904,12.2889952878823
|short_description=p2@Gabarapl1
|short_description=p2@Gabarapl1
}}
}}

Latest revision as of 19:14, 26 September 2015

Short description:p2@Gabarapl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gabarapl1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000032264, NM_020590, uc009efz.1_5end
EntrezGene:Gabarapl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gabarapl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.48
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A345.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.63
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.34
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I28.83
Ileum epithelium, pool1.CNhs13199.10252-104B915.39
Ileum epithelium, pool2.CNhs13232.10253-104C16.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.98
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D933.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.76
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.29
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B843.06
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C336.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E147.85
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C550.54
Mouse Granule cells, donor1.CNhs12131.11713-123C328.93
Mouse Granule cells, donor2.CNhs12357.11731-123E330.68
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.35
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C761.19
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E784.05
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D256.13
Mouse Microglia, donor1.CNhs12629.11718-123C848.54
Mouse Microglia, donor2.CNhs12634.11736-123E856.86
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.51
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F538.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D936.81
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F153.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D550.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D233.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F235.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3132.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3105.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7116.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D433.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F437.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4116.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5127.18
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6124.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D632.11
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.88
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.52
Mouse Schwann, donor1.CNhs12507.11728-123D927.87
Mouse Schwann, donor2.CNhs12573.11746-123F924.71
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G355.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F742.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C887.43
Mouse hepatocyte, donor6.CNhs13090.11822-124F430.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F650.18
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A733.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.96
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G624.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.59
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B638.14
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D739.34
adrenal gland, embryo E14.CNhs11038.406-44C58.67
adrenal gland, embryo E16.CNhs11004.1254-43D612.18
adrenal gland, embryo E17.CNhs11043.1263-45I113.84
adrenal gland, embryo E18.CNhs11026.1262-18F524.42
adrenal gland, neonate N00.CNhs11191.1311-23C121.17
adrenal gland, neonate N25.CNhs11223.1377-27I330.79
amnion, adult pregnant day17.5.CNhs10488.583-22A847.96
aorta, adult.CNhs10498.46-23H129.79
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F58.74
bone (os femoris), neonate N16.CNhs11225.1525-43A69.50
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B245.97
cerebellum, neonate N30.CNhs11135.1395-42I250.27
colon, adult.CNhs10468.36-18H77.92
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D424.02
corpora quadrigemina, adult.CNhs10501.16-22A471.15
corpus striatum, adult.CNhs10487.19-21D859.93
corpus striatum, neonate N00.CNhs11226.630-43F132.54
cortex, adult.CNhs10473.12-14D582.39
cortex, neonate N30.CNhs11107.1392-42F2110.47
diencephalon, adult.CNhs10482.20-12F287.48
diencephalon, neonate N30.CNhs11201.1388-42B282.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.39
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.92
epididymis, adult.CNhs10490.58-23B218.95
eyeball, adult.CNhs10484.31-12G425.67
eyeball, embryo E12.CNhs11016.345-16C68.98
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C912.96
eyeball, embryo E17.CNhs11023.1261-18D49.65
eyeball, neonate N00.CNhs11207.633-15C613.20
eyeball, neonate N01.CNhs11140.1532-43E713.32
eyeball, neonate N02.CNhs11205.1551-44G817.43
eyeball, neonate N16.CNhs11188.777-19A223.28
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H26.81
forelimb, embryo E13.CNhs10589.384-1E26.16
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E79.18
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I613.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.78
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.07
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I910.44
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C68.02
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G310.73
heart, neonate N00.CNhs11213.639-21E312.03
heart, neonate N03.CNhs11221.1349-25I28.23
heart, neonate N10.CNhs11118.749-24G113.63
heart, neonate N16.CNhs11209.782-15G118.00
heart, neonate N20.CNhs11127.821-26I618.71
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D225.50
hippocampus, adult.CNhs10478.13-16E884.54
hippocampus, neonate N00.CNhs11228.627-43G131.90
intestinal mucosa, adult.CNhs10506.860-29I39.25
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I56.40
intestine, embryo E13.CNhs11010.381-16D510.22
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H45.65
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E912.68
intestine, neonate N06.CNhs11102.688-20B818.10
intestine, neonate N07.CNhs11095.720-20F218.50
intestine, neonate N10.CNhs11098.755-23A512.28
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E311.46
intestine, neonate N30.CNhs11131.1384-42G118.72
kidney, embryo E14.CNhs10606.411-4I910.24
kidney, embryo E15.CNhs10997.434-16F87.43
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I210.79
kidney, embryo E18.CNhs11001.1288-20C715.13
kidney, neonate N00.CNhs11214.646-21G719.50
kidney, neonate N10.CNhs11206.758-6D522.77
kidney, neonate N20.CNhs11113.832-19I133.66
kidney, neonate N25.CNhs11122.1353-25F338.94
kidney, neonate N30.CNhs11203.1385-42H147.38
liver, adult pregnant day01.CNhs10466.508-5B238.24
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H67.27
liver, embryo E14.CNhs10594.409-16E17.65
liver, embryo E15.CNhs10520.433-16D76.69
liver, embryo E16.CNhs10523.462-17F59.41
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F417.02
liver, neonate N03.CNhs11123.1345-25G217.02
liver, neonate N06.CNhs11101.684-20A841.69
liver, neonate N07.CNhs11103.716-20H233.86
liver, neonate N10.CNhs11115.751-24B918.10
liver, neonate N20.CNhs11220.823-25A334.60
liver, neonate N25.CNhs11198.1368-26H139.83
liver, neonate N30.CNhs11106.1382-42D148.73
lung, adult.CNhs10474.28-22B138.43
lung, embryo E12.CNhs10522.354-16G26.82
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B68.21
lung, embryo E17.CNhs10605.480-44A68.04
lung, embryo E18.CNhs10583.1287-20I610.71
lung, neonate N00.CNhs11224.640-42C624.00
lung, neonate N06.CNhs11212.683-20E511.98
lung, neonate N07.CNhs11111.715-19A318.16
lung, neonate N10.CNhs11219.750-23E619.77
lung, neonate N20.CNhs11109.822-18A432.12
lung, neonate N25.CNhs11119.1359-25C724.52
lung, neonate N30.CNhs11133.1394-42H241.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.32
mammary gland, adult lactating day02.CNhs10480.595-22B612.29
mammary gland, adult pregnant day19.CNhs10476.588-5H210.49
medulla oblongata, adult.CNhs10477.17-12C290.07
medulla oblongata, neonate N30.CNhs11200.1396-42A394.71
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.64
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.88
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.92
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D524.84
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.32
olfactory brain, adult.CNhs10489.18-22I988.68
ovary, adult.CNhs10507.91-2I720.58
ovary, embryo E18.CNhs11040.505-44H719.94
ovary, neonate N00.CNhs11217.1299-22I419.87
oviduct, adult pregnant day01.CNhs10500.988-6G623.43
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F46.80
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I713.53
pancreas, neonate N00.CNhs11105.645-26G916.80
pancreas, neonate N01.CNhs11138.1531-43D713.09
pancreas, neonate N02.CNhs11139.1539-43D814.62
pancreas, neonate N16.CNhs11136.787-43B613.27
pancreas, neonate N25.CNhs11094.1555-45E222.14
pancreas, neonate N30.CNhs11182.1548-44H523.72
pituitary gland, adult.CNhs10493.21-1G854.81
pituitary gland, embryo E12.CNhs11018.346-16E69.18
pituitary gland, embryo E13.CNhs11009.370-44C711.38
pituitary gland, embryo E14.CNhs11037.398-44A510.07
pituitary gland, embryo E15.CNhs10592.427-16B916.14
pituitary gland, embryo E16.CNhs11036.449-43F623.01
pituitary gland, embryo E17.CNhs11039.1265-44F526.66
pituitary gland, neonate N00.CNhs11190.1308-22E932.58
placenta, adult pregnant day10.CNhs10472.539-13I718.30
placenta, adult pregnant day17.CNhs10464.577-18G337.71
prostate, adult.CNhs10470.859-1F815.88
skin, adult.CNhs10492.30-1C312.70
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H36.51
skin, neonate N06.CNhs11097.693-20I513.01
skin, neonate N10.CNhs11108.762-6C410.83
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C974.54
spleen, adult.CNhs10465.25-2G26.66
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F27.78
spleen, neonate N10.CNhs11116.752-24D18.48
spleen, neonate N20.CNhs11112.824-19H16.97
spleen, neonate N25.CNhs11099.1354-25G310.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C922.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.42
stomach, adult.CNhs10503.33-1H624.82
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D47.13
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C69.39
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A917.19
stomach, neonate N25.CNhs11104.1355-25E417.01
stomach, neonate N30.CNhs11134.1386-42I118.79
submandibular gland, adult.CNhs10469.59-29C136.04
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F510.77
testis, embryo E15.CNhs11034.443-27C515.06
testis, embryo E16.CNhs11033.470-26G512.44
testis, embryo E17.CNhs11029.486-18I517.18
testis, embryo E18.CNhs11027.503-18G517.23
testis, neonate N00.CNhs11189.1300-22B716.20
testis, neonate N07.CNhs11222.726-26I412.11
testis, neonate N10.CNhs11204.763-44D912.48
testis, neonate N20.CNhs11110.839-18H311.60
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F85.89
thymus, neonate N03.CNhs11137.2104-43C75.02
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D35.26
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A25.17
thymus, neonate N25.CNhs11125.1362-25G75.48
thymus, neonate N30.CNhs11132.1393-42G27.13
tongue, adult.CNhs10499.32-1B416.78
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H321.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.96
urinary bladder, adult.CNhs10481.879-12E427.63
uterus, adult pregnant day19.CNhs10497.590-15F528.90
uterus, adult.CNhs10509.92-27E518.32
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F830.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A163.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A261.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A383.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7100.88
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4108.93
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A589.89
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A681.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A786.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A874.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A982.84
whole body, embryo E11.CNhs11014.324-5I89.44
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F210.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.47
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.21
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.07
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I512.99
whole body, embryo E18.CNhs10516.493-3B310.76
whole body, neonate N00.CNhs10525.657-19C211.60
whole body, neonate N01.CNhs10576.659-23C611.86
whole body, neonate N06.CNhs10515.692-21D113.46
whole body, neonate N10.CNhs10518.761-6B412.29





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.49e-1244
neurectodermal cell1.49e-1244
neural cell2.29e-1243
electrically responsive cell1.09e-1139
electrically active cell1.09e-1139
CNS neuron (sensu Vertebrata)5.00e-1023
neuroblast (sensu Vertebrata)5.00e-1023
neuron8.32e-1033
neuronal stem cell8.32e-1033
neuroblast8.32e-1033
electrically signaling cell8.32e-1033
embryonic cell1.08e-0870

Uber anatomy
Ontology termp-valuen
nervous system2.88e-2675
central nervous system1.03e-2573
ectoderm-derived structure3.50e-2395
ectoderm3.50e-2395
presumptive ectoderm3.50e-2395
regional part of nervous system1.74e-2254
neural tube6.43e-2152
neural rod6.43e-2152
future spinal cord6.43e-2152
neural keel6.43e-2152
anatomical conduit2.36e-19122
brain6.75e-1947
future brain6.75e-1947
neurectoderm1.09e-1864
neural plate1.09e-1864
presumptive neural plate1.09e-1864
regional part of brain3.08e-1846
tube3.93e-18114
gray matter1.26e-1634
ecto-epithelium2.59e-1673
structure with developmental contribution from neural crest1.04e-1592
anterior neural tube1.41e-1540
regional part of forebrain5.19e-1539
forebrain5.19e-1539
future forebrain5.19e-1539
brain grey matter9.99e-1529
regional part of telencephalon9.99e-1529
telencephalon9.99e-1529
pre-chordal neural plate1.07e-1349
cerebral cortex5.97e-1121
cerebral hemisphere5.97e-1121
pallium5.97e-1121
regional part of cerebral cortex1.87e-0917
occipital lobe2.52e-0710
visual cortex2.52e-0710
neocortex2.52e-0710
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