FFCP PHASE1:Mm9::chr7:51684160..51684186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=272381 | |EntrezGene=272381 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=D3YZP3 | |UniProt=D3YZP3 | ||
|association_with_transcript=-201bp_to_ENSMUST00000127790_5end | |association_with_transcript=-201bp_to_ENSMUST00000127790_5end | ||
|cluster_id=chr7:51684160..51684186,+ | |||
|description=CAGE_peak_5_at_Lrrc4b_5end | |description=CAGE_peak_5_at_Lrrc4b_5end | ||
|id=chr7:51684160..51684186,+ | |id=chr7:51684160..51684186,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.26e-14!23;CL:0000337!1.26e-14!23;CL:0000540!1.70e-12!33;CL:0000047!1.70e-12!33;CL:0000031!1.70e-12!33;CL:0000404!1.70e-12!33;CL:0002319!1.03e-11!43;CL:0000221!1.12e-11!44;CL:0000133!1.12e-11!44;CL:0000393!2.57e-08!39;CL:0000211!2.57e-08!39;CL:0000055!8.96e-08!50 | |ontology_enrichment_celltype=CL:0000117!1.26e-14!23;CL:0000337!1.26e-14!23;CL:0000540!1.70e-12!33;CL:0000047!1.70e-12!33;CL:0000031!1.70e-12!33;CL:0000404!1.70e-12!33;CL:0002319!1.03e-11!43;CL:0000221!1.12e-11!44;CL:0000133!1.12e-11!44;CL:0000393!2.57e-08!39;CL:0000211!2.57e-08!39;CL:0000055!8.96e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-20,23;CL:0000337,1.29e-20,23;CL:0000540,1.03e-12,33;CL:0000047,1.03e-12,33;CL:0000031,1.03e-12,33;CL:0000404,1.03e-12,33;CL:0002319,1.58e-11,43;CL:0000221,4.73e-11,44;CL:0000133,4.73e-11,44;CL:0000393,1.71e-09,39;CL:0000211,1.71e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.45e-32!73;UBERON:0005743!6.45e-32!73;UBERON:0000073!1.52e-30!75;UBERON:0001016!1.52e-30!75;UBERON:0002346!3.61e-29!71;UBERON:0003075!3.61e-29!71;UBERON:0007284!3.61e-29!71;UBERON:0001049!1.69e-28!52;UBERON:0005068!1.69e-28!52;UBERON:0006241!1.69e-28!52;UBERON:0007135!1.69e-28!52;UBERON:0000033!9.14e-28!63;UBERON:0000955!3.81e-27!50;UBERON:0006238!3.81e-27!50;UBERON:0004121!5.57e-27!102;UBERON:0000924!5.57e-27!102;UBERON:0006601!5.57e-27!102;UBERON:0002616!2.69e-26!49;UBERON:0003056!5.94e-25!49;UBERON:0003080!3.96e-22!40;UBERON:0002780!2.37e-21!39;UBERON:0001890!2.37e-21!39;UBERON:0006240!2.37e-21!39;UBERON:0002020!2.45e-20!34;UBERON:0002791!4.26e-17!29;UBERON:0003528!4.26e-17!29;UBERON:0001893!4.26e-17!29;UBERON:0000153!9.17e-15!94;UBERON:0007811!1.92e-13!86;UBERON:0000956!6.65e-12!21;UBERON:0001869!6.65e-12!21;UBERON:0000203!6.65e-12!21;UBERON:0002619!9.99e-10!17;UBERON:0000468!5.24e-07!333;UBERON:0003076!7.75e-07!12;UBERON:0003057!7.75e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!6.45e-32!73;UBERON:0005743!6.45e-32!73;UBERON:0000073!1.52e-30!75;UBERON:0001016!1.52e-30!75;UBERON:0002346!3.61e-29!71;UBERON:0003075!3.61e-29!71;UBERON:0007284!3.61e-29!71;UBERON:0001049!1.69e-28!52;UBERON:0005068!1.69e-28!52;UBERON:0006241!1.69e-28!52;UBERON:0007135!1.69e-28!52;UBERON:0000033!9.14e-28!63;UBERON:0000955!3.81e-27!50;UBERON:0006238!3.81e-27!50;UBERON:0004121!5.57e-27!102;UBERON:0000924!5.57e-27!102;UBERON:0006601!5.57e-27!102;UBERON:0002616!2.69e-26!49;UBERON:0003056!5.94e-25!49;UBERON:0003080!3.96e-22!40;UBERON:0002780!2.37e-21!39;UBERON:0001890!2.37e-21!39;UBERON:0006240!2.37e-21!39;UBERON:0002020!2.45e-20!34;UBERON:0002791!4.26e-17!29;UBERON:0003528!4.26e-17!29;UBERON:0001893!4.26e-17!29;UBERON:0000153!9.17e-15!94;UBERON:0007811!1.92e-13!86;UBERON:0000956!6.65e-12!21;UBERON:0001869!6.65e-12!21;UBERON:0000203!6.65e-12!21;UBERON:0002619!9.99e-10!17;UBERON:0000468!5.24e-07!333;UBERON:0003076!7.75e-07!12;UBERON:0003057!7.75e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.61e-42,54;UBERON:0001049,3.15e-40,52;UBERON:0005068,3.15e-40,52;UBERON:0006241,3.15e-40,52;UBERON:0007135,3.15e-40,52;UBERON:0002346,1.24e-39,64;UBERON:0003075,1.24e-39,64;UBERON:0007284,1.24e-39,64;UBERON:0001017,1.05e-38,73;UBERON:0001016,4.34e-37,75;UBERON:0000955,2.52e-35,47;UBERON:0006238,2.52e-35,47;UBERON:0002616,4.14e-34,46;UBERON:0004121,5.19e-33,95;UBERON:0000924,5.19e-33,95;UBERON:0006601,5.19e-33,95;UBERON:0003056,1.71e-32,49;UBERON:0010371,3.42e-32,73;UBERON:0003080,2.07e-30,40;UBERON:0002780,2.77e-29,39;UBERON:0001890,2.77e-29,39;UBERON:0006240,2.77e-29,39;UBERON:0002020,9.25e-28,34;UBERON:0003528,4.77e-23,29;UBERON:0002791,4.77e-23,29;UBERON:0001893,4.77e-23,29;UBERON:0010314,3.21e-22,92;UBERON:0000956,1.58e-15,21;UBERON:0001869,1.58e-15,21;UBERON:0000203,1.58e-15,21;UBERON:0002619,2.23e-12,17;UBERON:0003076,9.89e-10,12;UBERON:0003057,9.89e-10,12;UBERON:0000025,1.59e-09,114;UBERON:0002420,1.00e-08,8;UBERON:0007245,1.00e-08,8;UBERON:0010009,1.00e-08,8;UBERON:0010011,1.00e-08,8;UBERON:0000454,1.00e-08,8;UBERON:0002021,1.43e-08,10;UBERON:0000411,1.43e-08,10;UBERON:0001950,1.43e-08,10;UBERON:0004111,6.43e-08,122;UBERON:0001894,4.58e-07,10;UBERON:0006222,4.58e-07,10;UBERON:0002240,9.67e-07,6;UBERON:0005174,9.67e-07,6;UBERON:0001137,9.67e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.5378032791413,0.777719596297134,0.839918529752175,0,0,0,0,0,0,0,3.64169629547276,4.23192783417626,4.43681982454325,0.338844532069132,0,0,0,0,1.49800055259202,2.68952813725088,3.00699875694585,3.91517221161903,2.52389953621658,4.85606673486466,3.3130281142742,3.1847607795888,3.35459148563827,3.67687514644008,3.30347642998166,4.46905683298157,4.14737639791857,6.3305418110493,6.49562269577109,3.12548022334056,3.07101298901519,3.93933827022176,4.43114918552749,5.59794312399969,3.27454865837937,6.33758115806022,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,1.04091196059682,0.608930956624282,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0.485300549842228,0.220841518460394,0,0,8.19786231632332,3.35114730901528,0,0,0,0,6.89036941262184,7.32000964509802,9.80103946480342,5.9100268865374,5.62574006126727,5.194701113989,6.48965052271031,0.611036183101898,0.124406970610093,0.252722758433675,0.631325567659422,1.82168620147785,0.689706313300419,1.0803727788321,1.50704817835715,1.7009124787832,2.8185018462667,2.90475346135159,1.29351685369508,1.07783996466421,1.51284864134255,1.58356011747554,2.19195732427575,0.834141747676794,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0,0.710234206755631,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0.268412837520744,10.5144974282064,8.12946437796347,0,0,0.426576501070468,0.464473343720877,1.15980715189884,1.21010114774006,0,0.951128130562796,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.913988100877831,0,0.814605311381257,0.387904974335251,0.350679099451593,0.252946148497029,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,1.35796068620151,0.704070744865506,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0,0.433947175744535,0,0,0,0.275936746304732,6.42202359951168,4.21962071731931,0,0,0.315508219416257,0,0.861693590931196,0.238968797952552,0.222798674082394,1.13230612315533,0.809621403349789,0.876767573733936,0.395287777946524,9.96096080907602,0.425820255624806,1.6025904330053,1.30309567482861,0.494910368917606,0,0,0.906970670894253,0.188605079755898,1.47650946440386,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,1.62054984628179,1.68166288917581,1.28602221018955,2.12808280370728,1.24858172321449,1.48094118541909,3.04464949114599,0,0,0,0,0,0,0,0.328281799490123,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.972048067396211,0.627264888043406,0.436725127492355,0.539457385539283,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0,0.675824501963113,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0,0.405450430580328,0.410843828659309,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.665957860122194,0,0,0.579568782096571,0.375364950902364,1.09890974560359,0.643105137237198,0.501572104035363,7.90652579663893,3.22227665555024,6.30185064783336,3.60891682921744,1.37016503954128,1.5107877947794,4.72515750162264,2.70192721934532,1.35942722695261,4.14208249401456,0.31136204275253,1.19707462020309,1.36586884603307,1.21553358534147,1.46729213839588,0.919217542250071,1.55572709461131,1.03017528619447,0.962757628775446,1.76888048234658,1.01391719956096,1.88626341386076,0.749132059759059,1.53660365771686,1.26358031702349,1.42888107384922,1.50649623728312,0.77163688185482,0.824171801606613,2.06078488188156,0,1.24233064311536,1.1921809497366,0.436039249896986,1.41164070622996,1.18460451048347,1.09756783723664,1.05227884575137,1.90125759384206,0,1.54225523561426,0.985044823755635,1.22769312950907,1.08455788830176,0.385813221962283,3.74715866906919,1.16965804222704,0.859484216193193,0.765153328275374,1.10295709559758,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.5378032791413,0.777719596297134,0.839918529752175,0,0,0,0,0,0,0,3.64169629547276,4.23192783417626,4.43681982454325,0.338844532069132,0,0,0,0,1.49800055259202,2.68952813725088,3.00699875694585,3.91517221161903,2.52389953621658,4.85606673486466,3.3130281142742,3.1847607795888,3.35459148563827,3.67687514644008,3.30347642998166,4.46905683298157,4.14737639791857,6.3305418110493,6.49562269577109,3.12548022334056,3.07101298901519,3.93933827022176,4.43114918552749,5.59794312399969,3.27454865837937,6.33758115806022,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,1.04091196059682,0.608930956624282,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0.485300549842228,0.220841518460394,0,0,8.19786231632332,3.35114730901528,0,0,0,0,6.89036941262184,7.32000964509802,9.80103946480342,5.9100268865374,5.62574006126727,5.194701113989,6.48965052271031,0.611036183101898,0.124406970610093,0.252722758433675,0.631325567659422,1.82168620147785,0.689706313300419,1.0803727788321,1.50704817835715,1.7009124787832,2.8185018462667,2.90475346135159,1.29351685369508,1.07783996466421,1.51284864134255,1.58356011747554,2.19195732427575,0.834141747676794,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0,0.710234206755631,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0.268412837520744,10.5144974282064,8.12946437796347,0,0,0.426576501070468,0.464473343720877,1.15980715189884,1.21010114774006,0,0.951128130562796,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.913988100877831,0,0.814605311381257,0.387904974335251,0.350679099451593,0.252946148497029,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,1.35796068620151,0.704070744865506,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0,0.433947175744535,0,0,0,0.275936746304732,6.42202359951168,4.21962071731931,0,0,0.315508219416257,0,0.861693590931196,0.238968797952552,0.222798674082394,1.13230612315533,0.809621403349789,0.876767573733936,0.395287777946524,9.96096080907602,0.425820255624806,1.6025904330053,1.30309567482861,0.494910368917606,0,0,0.906970670894253,0.188605079755898,1.47650946440386,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,1.62054984628179,1.68166288917581,1.28602221018955,2.12808280370728,1.24858172321449,1.48094118541909,3.04464949114599,0,0,0,0,0,0,0,0.328281799490123,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.972048067396211,0.627264888043406,0.436725127492355,0.539457385539283,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0,0.675824501963113,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0,0.405450430580328,0.410843828659309,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.665957860122194,0,0,0.579568782096571,0.375364950902364,1.09890974560359,0.643105137237198,0.501572104035363,7.90652579663893,3.22227665555024,6.30185064783336,3.60891682921744,1.37016503954128,1.5107877947794,4.72515750162264,2.70192721934532,1.35942722695261,4.14208249401456,0.31136204275253,1.19707462020309,1.36586884603307,1.21553358534147,1.46729213839588,0.919217542250071,1.55572709461131,1.03017528619447,0.962757628775446,1.76888048234658,1.01391719956096,1.88626341386076,0.749132059759059,1.53660365771686,1.26358031702349,1.42888107384922,1.50649623728312,0.77163688185482,0.824171801606613,2.06078488188156,0,1.24233064311536,1.1921809497366,0.436039249896986,1.41164070622996,1.18460451048347,1.09756783723664,1.05227884575137,1.90125759384206,0,1.54225523561426,0.985044823755635,1.22769312950907,1.08455788830176,0.385813221962283,3.74715866906919,1.16965804222704,0.859484216193193,0.765153328275374,1.10295709559758,0.463735671240843 | ||
|short_description=p5@Lrrc4b | |short_description=p5@Lrrc4b | ||
}} | }} |
Latest revision as of 19:12, 26 September 2015
Short description: | p5@Lrrc4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lrrc4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -201bp_to_ENSMUST00000127790_5end |
EntrezGene: | Lrrc4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.29e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-20 | 23 |
neuron | 1.03e-12 | 33 |
neuronal stem cell | 1.03e-12 | 33 |
neuroblast | 1.03e-12 | 33 |
electrically signaling cell | 1.03e-12 | 33 |
neural cell | 1.58e-11 | 43 |
ectodermal cell | 4.73e-11 | 44 |
neurectodermal cell | 4.73e-11 | 44 |
electrically responsive cell | 1.71e-09 | 39 |
electrically active cell | 1.71e-09 | 39 |