FFCP PHASE1:Mm9::chr15:41278984..41279025,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170719 | |EntrezGene=170719 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q4KMM3 | |UniProt=Q4KMM3 | ||
|association_with_transcript=-2bp_to_ENSMUST00000090096,ENSMUST00000110297,NM_001130166,uc007vot.2_5end | |association_with_transcript=-2bp_to_ENSMUST00000090096,ENSMUST00000110297,NM_001130166,uc007vot.2_5end | ||
|cluster_id=chr15:41278984..41279025,+ | |||
|description=CAGE_peak_3_at_Oxr1_5end | |description=CAGE_peak_3_at_Oxr1_5end | ||
|id=chr15:41278984..41279025,+ | |id=chr15:41278984..41279025,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.67e-07!43;CL:0000221!6.19e-07!44;CL:0000133!6.19e-07!44;CL:0000540!8.86e-07!33;CL:0000047!8.86e-07!33;CL:0000031!8.86e-07!33;CL:0000404!8.86e-07!33 | |ontology_enrichment_celltype=CL:0002319!5.67e-07!43;CL:0000221!6.19e-07!44;CL:0000133!6.19e-07!44;CL:0000540!8.86e-07!33;CL:0000047!8.86e-07!33;CL:0000031!8.86e-07!33;CL:0000404!8.86e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.63e-07,43;CL:0000221,9.33e-07,44;CL:0000133,9.33e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.91e-16!75;UBERON:0001016!1.91e-16!75;UBERON:0001017!1.04e-15!73;UBERON:0005743!1.04e-15!73;UBERON:0004121!9.19e-15!102;UBERON:0000924!9.19e-15!102;UBERON:0006601!9.19e-15!102;UBERON:0002346!1.01e-12!71;UBERON:0003075!1.01e-12!71;UBERON:0007284!1.01e-12!71;UBERON:0001049!7.54e-09!52;UBERON:0005068!7.54e-09!52;UBERON:0006241!7.54e-09!52;UBERON:0007135!7.54e-09!52;UBERON:0000955!1.90e-08!50;UBERON:0006238!1.90e-08!50;UBERON:0000033!2.91e-08!63;UBERON:0002616!5.89e-08!49;UBERON:0002021!1.14e-07!10;UBERON:0000411!1.14e-07!10;UBERON:0001950!1.14e-07!10;UBERON:0002020!1.80e-07!34 | |ontology_enrichment_uberon=UBERON:0000073!1.91e-16!75;UBERON:0001016!1.91e-16!75;UBERON:0001017!1.04e-15!73;UBERON:0005743!1.04e-15!73;UBERON:0004121!9.19e-15!102;UBERON:0000924!9.19e-15!102;UBERON:0006601!9.19e-15!102;UBERON:0002346!1.01e-12!71;UBERON:0003075!1.01e-12!71;UBERON:0007284!1.01e-12!71;UBERON:0001049!7.54e-09!52;UBERON:0005068!7.54e-09!52;UBERON:0006241!7.54e-09!52;UBERON:0007135!7.54e-09!52;UBERON:0000955!1.90e-08!50;UBERON:0006238!1.90e-08!50;UBERON:0000033!2.91e-08!63;UBERON:0002616!5.89e-08!49;UBERON:0002021!1.14e-07!10;UBERON:0000411!1.14e-07!10;UBERON:0001950!1.14e-07!10;UBERON:0002020!1.80e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.66e-16,75;UBERON:0001017,1.53e-15,73;UBERON:0010314,1.03e-13,92;UBERON:0004121,2.52e-12,95;UBERON:0000924,2.52e-12,95;UBERON:0006601,2.52e-12,95;UBERON:0002346,2.41e-10,64;UBERON:0003075,2.41e-10,64;UBERON:0007284,2.41e-10,64;UBERON:0000073,9.98e-10,54;UBERON:0001049,1.27e-08,52;UBERON:0005068,1.27e-08,52;UBERON:0006241,1.27e-08,52;UBERON:0007135,1.27e-08,52;UBERON:0010371,3.32e-08,73;UBERON:0002021,5.59e-08,10;UBERON:0000411,5.59e-08,10;UBERON:0001950,5.59e-08,10;UBERON:0002020,3.30e-07,34;UBERON:0000955,9.89e-07,47;UBERON:0006238,9.89e-07,47 | |||
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| ||
|short_description=p3@Oxr1 | |short_description=p3@Oxr1 | ||
}} | }} |
Latest revision as of 19:01, 26 September 2015
Short description: | p3@Oxr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Oxr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -2bp_to_ENSMUST00000090096, ENSMUST00000110297, NM_001130166, uc007vot.2_5end |
EntrezGene: | Oxr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.63e-07 | 43 |
ectodermal cell | 9.33e-07 | 44 |
neurectodermal cell | 9.33e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.66e-16 | 75 |
central nervous system | 1.53e-15 | 73 |
structure with developmental contribution from neural crest | 1.03e-13 | 92 |
ectoderm-derived structure | 2.52e-12 | 95 |
ectoderm | 2.52e-12 | 95 |
presumptive ectoderm | 2.52e-12 | 95 |
neurectoderm | 2.41e-10 | 64 |
neural plate | 2.41e-10 | 64 |
presumptive neural plate | 2.41e-10 | 64 |
regional part of nervous system | 9.98e-10 | 54 |
neural tube | 1.27e-08 | 52 |
neural rod | 1.27e-08 | 52 |
future spinal cord | 1.27e-08 | 52 |
neural keel | 1.27e-08 | 52 |
ecto-epithelium | 3.32e-08 | 73 |
occipital lobe | 5.59e-08 | 10 |
visual cortex | 5.59e-08 | 10 |
neocortex | 5.59e-08 | 10 |
gray matter | 3.30e-07 | 34 |
brain | 9.89e-07 | 47 |
future brain | 9.89e-07 | 47 |