FFCP PHASE1:Mm9::chr15:37388278..37388336,-: Difference between revisions
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{{FFCP|EntrezGene=52589|HGNC=|MCL_coexpression_id=2|UniProt=Q91X97|association_with_transcript=0bp_to_ENSMUST00000116445_5end|description=CAGE_peak_6_at_Ncald_5end|id=chr15:37388278..37388336,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.88e-07,3;CL:0002614,7.01e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.46e-14!75;UBERON:0001016!4.46e-14!75;UBERON:0001017!8.83e-14!73;UBERON:0005743!8.83e-14!73;UBERON:0004121!1.32e-13!102;UBERON:0000924!1.32e-13!102;UBERON:0006601!1.32e-13!102;UBERON:0001049!3.35e-13!52;UBERON:0005068!3.35e-13!52;UBERON:0006241!3.35e-13!52;UBERON:0007135!3.35e-13!52;UBERON:0000955!1.22e-12!50;UBERON:0006238!1.22e-12!50;UBERON:0000033!2.33e-12!63;UBERON:0002616!5.02e-12!49;UBERON:0002346!1.03e-11!71;UBERON:0003075!1.03e-11!71;UBERON:0007284!1.03e-11!71;UBERON:0002020!5.91e-11!34;UBERON:0002021!2.58e-09!10;UBERON:0000411!2.58e-09!10;UBERON:0001950!2.58e-09!10;UBERON:0002791!1.70e-08!29;UBERON:0003528!1.70e-08!29;UBERON:0001893!1.70e-08!29;UBERON:0003080!3.01e-08!40;UBERON:0003056!6.86e-08!49;UBERON:0002780!1.04e-07!39;UBERON:0001890!1.04e-07!39;UBERON:0006240!1.04e-07!39;UBERON:0004111!2.37e-07!122;UBERON:0002619!2.52e-07!17;UBERON:0000025!4.88e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.62e-30,54;UBERON:0001049,4.84e-27,52;UBERON:0005068,4.84e-27,52;UBERON:0006241,4.84e-27,52;UBERON:0007135,4.84e-27,52;UBERON:0001017,5.46e-26,73;UBERON:0001016,4.35e-25,75;UBERON:0000955,3.33e-24,47;UBERON:0006238,3.33e-24,47;UBERON:0002021,5.01e-23,10;UBERON:0000411,5.01e-23,10;UBERON:0001950,5.01e-23,10;UBERON:0002616,1.19e-22,46;UBERON:0002020,4.05e-22,34;UBERON:0002346,1.13e-20,64;UBERON:0003075,1.13e-20,64;UBERON:0007284,1.13e-20,64;UBERON:0004121,1.18e-19,95;UBERON:0000924,1.18e-19,95;UBERON:0006601,1.18e-19,95;UBERON:0003528,2.07e-19,29;UBERON:0002791,2.07e-19,29;UBERON:0001893,2.07e-19,29;UBERON:0003080,1.85e-18,40;UBERON:0002619,4.81e-18,17;UBERON:0010371,2.83e-17,73;UBERON:0002780,5.06e-17,39;UBERON:0001890,5.06e-17,39;UBERON:0006240,5.06e-17,39;UBERON:0000956,9.27e-17,21;UBERON:0001869,9.27e-17,21;UBERON:0000203,9.27e-17,21;UBERON:0003056,4.02e-14,49;UBERON:0000025,2.56e-12,114;UBERON:0010314,2.67e-12,92;UBERON:0004111,4.54e-12,122;UBERON:0003076,3.23e-09,12;UBERON:0003057,3.23e-09,12;UBERON:0002950,9.51e-09,4;UBERON:0001891,9.51e-09,4;UBERON:0009616,9.51e-09,4;UBERON:0010286,9.51e-09,4;UBERON:0011216,3.18e-08,194;UBERON:0004684,1.88e-07,3;UBERON:0002275,1.88e-07,3;UBERON:0002038,7.01e-07,3;UBERON:0009663,7.01e-07,3;UBERON:0009661,7.01e-07,3;UBERON:0000125,7.01e-07,3;UBERON:0002308,7.01e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,1.09012578190223,0,0,0.139986421625363,2.87505128729943,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,1.10434270475807,0.244981598429908,0.191690942036473,0,5.50579404996943,7.40586560894089,5.9906547969935,0.395658863190582,0.548925861614458,0,1.67509799400829,2.8138130501584,3.66715794664344,1.17851434189467,2.27794689278565,0.745597783301202,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0.494389935468748,0,0,0.323533699894818,0.220841518460394,0,0,0.878342391034642,1.8850203613211,0,0,0,0,4.49371918214468,0.457500602818626,1.50785222535437,33.3742694769171,24.8043993610421,2.28566849015516,6.97637431191358,0.407357455401265,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0.292399974850665,0,0.134206418760372,30.0714626446702,1.3377599609307,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0,0.571242563048644,0,0,0.581857461502877,0.561086559122548,0.632365371242573,0.738050739898011,0.31399745568275,0.123397163921801,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.936113019343682,0.252578877947112,0,0,0.554259570499814,0,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.952174563544055,0.195133647857799,0.945810864637146,1.32878813789265,1.11618338060241,0.655453258862952,1.72684981865896,1.3018415272336,0,0,0,0,1.60550589987792,1.40654023910644,0,0,0.315508219416257,0.390438744296638,0,0,0.445597348164788,0,0,0,0.395287777946524,5.46246237917072,0.851640511249612,0.178065603667255,0,0.494910368917606,0,0,0,0.188605079755898,0,0.614870295887855,0,1.09060118843252,1.06949213515416,0.316036757935816,0,1.03135543248187,0,0,0,0.2143370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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52589 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q91X97 | |||
|association_with_transcript=0bp_to_ENSMUST00000116445_5end | |||
|cluster_id=chr15:37388278..37388336,- | |||
|description=CAGE_peak_6_at_Ncald_5end | |||
|id=chr15:37388278..37388336,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.88e-07,3;CL:0002614,7.01e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.46e-14!75;UBERON:0001016!4.46e-14!75;UBERON:0001017!8.83e-14!73;UBERON:0005743!8.83e-14!73;UBERON:0004121!1.32e-13!102;UBERON:0000924!1.32e-13!102;UBERON:0006601!1.32e-13!102;UBERON:0001049!3.35e-13!52;UBERON:0005068!3.35e-13!52;UBERON:0006241!3.35e-13!52;UBERON:0007135!3.35e-13!52;UBERON:0000955!1.22e-12!50;UBERON:0006238!1.22e-12!50;UBERON:0000033!2.33e-12!63;UBERON:0002616!5.02e-12!49;UBERON:0002346!1.03e-11!71;UBERON:0003075!1.03e-11!71;UBERON:0007284!1.03e-11!71;UBERON:0002020!5.91e-11!34;UBERON:0002021!2.58e-09!10;UBERON:0000411!2.58e-09!10;UBERON:0001950!2.58e-09!10;UBERON:0002791!1.70e-08!29;UBERON:0003528!1.70e-08!29;UBERON:0001893!1.70e-08!29;UBERON:0003080!3.01e-08!40;UBERON:0003056!6.86e-08!49;UBERON:0002780!1.04e-07!39;UBERON:0001890!1.04e-07!39;UBERON:0006240!1.04e-07!39;UBERON:0004111!2.37e-07!122;UBERON:0002619!2.52e-07!17;UBERON:0000025!4.88e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.62e-30,54;UBERON:0001049,4.84e-27,52;UBERON:0005068,4.84e-27,52;UBERON:0006241,4.84e-27,52;UBERON:0007135,4.84e-27,52;UBERON:0001017,5.46e-26,73;UBERON:0001016,4.35e-25,75;UBERON:0000955,3.33e-24,47;UBERON:0006238,3.33e-24,47;UBERON:0002021,5.01e-23,10;UBERON:0000411,5.01e-23,10;UBERON:0001950,5.01e-23,10;UBERON:0002616,1.19e-22,46;UBERON:0002020,4.05e-22,34;UBERON:0002346,1.13e-20,64;UBERON:0003075,1.13e-20,64;UBERON:0007284,1.13e-20,64;UBERON:0004121,1.18e-19,95;UBERON:0000924,1.18e-19,95;UBERON:0006601,1.18e-19,95;UBERON:0003528,2.07e-19,29;UBERON:0002791,2.07e-19,29;UBERON:0001893,2.07e-19,29;UBERON:0003080,1.85e-18,40;UBERON:0002619,4.81e-18,17;UBERON:0010371,2.83e-17,73;UBERON:0002780,5.06e-17,39;UBERON:0001890,5.06e-17,39;UBERON:0006240,5.06e-17,39;UBERON:0000956,9.27e-17,21;UBERON:0001869,9.27e-17,21;UBERON:0000203,9.27e-17,21;UBERON:0003056,4.02e-14,49;UBERON:0000025,2.56e-12,114;UBERON:0010314,2.67e-12,92;UBERON:0004111,4.54e-12,122;UBERON:0003076,3.23e-09,12;UBERON:0003057,3.23e-09,12;UBERON:0002950,9.51e-09,4;UBERON:0001891,9.51e-09,4;UBERON:0009616,9.51e-09,4;UBERON:0010286,9.51e-09,4;UBERON:0011216,3.18e-08,194;UBERON:0004684,1.88e-07,3;UBERON:0002275,1.88e-07,3;UBERON:0002038,7.01e-07,3;UBERON:0009663,7.01e-07,3;UBERON:0009661,7.01e-07,3;UBERON:0000125,7.01e-07,3;UBERON:0002308,7.01e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,1.09012578190223,0,0,0.139986421625363,2.87505128729943,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,1.10434270475807,0.244981598429908,0.191690942036473,0,5.50579404996943,7.40586560894089,5.9906547969935,0.395658863190582,0.548925861614458,0,1.67509799400829,2.8138130501584,3.66715794664344,1.17851434189467,2.27794689278565,0.745597783301202,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.470354828542819,0,0.494389935468748,0,0,0.323533699894818,0.220841518460394,0,0,0.878342391034642,1.8850203613211,0,0,0,0,4.49371918214468,0.457500602818626,1.50785222535437,33.3742694769171,24.8043993610421,2.28566849015516,6.97637431191358,0.407357455401265,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0.292399974850665,0,0.134206418760372,30.0714626446702,1.3377599609307,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0,0.571242563048644,0,0,0.581857461502877,0.561086559122548,0.632365371242573,0.738050739898011,0.31399745568275,0.123397163921801,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.936113019343682,0.252578877947112,0,0,0.554259570499814,0,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.952174563544055,0.195133647857799,0.945810864637146,1.32878813789265,1.11618338060241,0.655453258862952,1.72684981865896,1.3018415272336,0,0,0,0,1.60550589987792,1.40654023910644,0,0,0.315508219416257,0.390438744296638,0,0,0.445597348164788,0,0,0,0.395287777946524,5.46246237917072,0.851640511249612,0.178065603667255,0,0.494910368917606,0,0,0,0.188605079755898,0,0.614870295887855,0,1.09060118843252,1.06949213515416,0.316036757935816,0,1.03135543248187,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,1.8542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0.87345025498471,0.404593039154462,0.330613822901344,0,0,5.59205381778233,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0,0,18.0720589637461,18.4130094602871,17.7597609166213,17.8727309637435,30.1436308699083,21.1510291269116,33.0761025113585,26.1186297870048,33.0793958558469,34.1721805756201,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.666740183404846,0,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0.448176066834085,0.17230640686684,0.476293691283074,0.579421629724277,0.192909220463705,0.824171801606613,0.588795680537589,0,0.354951612318675,0.476872379894642,0.145346416632329,0.282328141245992,0.338458431566706,0.365855945745545,0.789209134313529,0.543216455383447,0,0.593175090620871,0.394017929502254,0,0.309873682371932,0.192906610981141,0,0.935726433781634,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p6@Ncald | |||
}} |
Latest revision as of 18:27, 26 September 2015
Short description: | p6@Ncald |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ncald_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000116445_5end |
EntrezGene: | Ncald |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.88e-07 | 3 |
neuron of the substantia nigra | 7.01e-07 | 3 |