FFCP PHASE1:Mm9::chr15:36538379..36538390,-: Difference between revisions
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{{FFCP|EntrezGene=18458|HGNC=|MCL_coexpression_id=773|UniProt=P29341,Q3V2M1|association_with_transcript=337bp_to_ENSMUST00000001809,ENSMUST00000146327,NM_008774,uc007vmx.2,uc007vmy.2_5end|description=CAGE_peak_6_at_Pabpc1_5end|id=chr15:36538379..36538390,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!8.53e-09!193;UBERON:0004120!8.53e-09!193;UBERON:0006603!8.53e-09!193;UBERON:0001048!5.01e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.87e-07,120;UBERON:0004120,5.87e-07,120;UBERON:0006603,5.87e-07,120;UBERON:0001048,9.18e-07,134|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0.467225281191051,0.645616617207881,0.985521055061667,0.468129052643987,0,0.319088635981346,0.171200729931206,0.0874204024189974,1.99865857089398,0.404950534779652,1.39912375625629,1.26184866143295,0.411343300817216,0,2.63634199468316,0.595745707205312,0.261199789138935,0.47997726838022,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0,0,1.27006134691926,1.23012957516914,0,0.866554859253824,0.498703936075477,0.612508068787107,0.418531630736908,0,0,0,0,0,1.76255545165808,2.53442328048786,2.38610777810186,1.56478268869608,0.218025156380447,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0.336093799142464,1.02903774414379,1.43266719969378,1.03134418455488,0.606949382578793,0,0,2.03306719241479,0,1.3498495759221,0,2.1314403448383,0.299600110518405,1.92109152660777,0.311068836925433,1.08004750665353,0.420649922702764,0.285650984403804,0.220868540951614,0.61245399607477,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.395658863190582,0.274462930807229,0,0,0,0.45839474333043,0.294628585473668,0.284743361598206,0.372798891650601,0.227178579999552,0.453429360640713,0,0,4.0798280022465,1.07940638327563,1.94932925234301,0.896053774194671,0.702222100658759,0.170430322578058,0.519572009205738,0,0,0,0,0,0.216491041011214,0,1.01104889002957,2.2836775943812,0.776813650941515,0.148442139064825,0.867426633830679,0.913396434936424,2.07553947530453,0.301445281105245,1.64624189989987,0.628332956648377,0.494389935468748,0.144599356919912,2.65383165584962,1.29413479957927,1.98757366614354,1.93950101254089,0,0.292780797011547,1.67557365450764,1.78819938646014,0.599075622529601,0,0.381210681219194,0,0,0.376963056338593,0,0.511430914660661,0.20778804455956,0.162241263067758,0.611036183101898,2.11491850037158,0,0.420883711772948,2.08192708740326,0,0.360124259610698,0.150704817835715,0.680364991513279,0.512454881139399,0.655912071918102,0.517406741478031,1.29340795759705,0.945530400839096,1.23165786914764,1.09597866213787,1.39023624612799,0.696504333044333,0.61734640922383,1.59227413454795,0,0.51469581422943,0.284163499395593,1.03562886267751,0.938104239924385,0,1.18372367792605,0.590292695242212,0.308534225774757,0.232533944750408,0.536546802799238,0.467061369468678,0,0,0.405344047729279,0.292399974850665,0.219550115291051,0,0.210289948564127,0.411618449517138,0.660837565967596,0.528901133327089,0.639864751605702,0.232236671860439,0.257734922644187,1.21010114774006,0.444756087689741,0.190225626112559,2.37264530772256,0.494096864172033,0,0.994782360205754,0.19496408711912,5.39291645192533,1.72910439899755,1.7922714592893,3.98302592001472,0.342745537829186,2.25415471346161,0.407302655690628,0.581857461502877,1.1221731182451,0.252946148497029,0.738050739898011,0.156998727841375,0.246794327843601,0.296452627087149,1.33476084572875,1.96558995113203,1.79889689907883,1.82574109249653,0.964708639009667,1.01850340712568,1.72617682470486,8.75530224585191,1.09824565275233,0,1.86070473834252,0,0,0,1.4473305640901,0.369506380333209,0.568474235311454,0.651859905768103,0.509235257325564,0.704070744865506,0.837531287209079,0,2.14647012643579,0.472905432318573,0.44292937929755,0.478364305972461,1.47476983244164,0.518054945597687,0.289298117163023,1.50791283939272,0.54390568381871,0,1.65562047782839,0,0,2.13115428989678,0.757412781613119,0.631016438832513,0.390438744296638,0.430846795465598,0.716906393857656,0.891194696329576,0.566153061577665,0,0.876767573733936,0.790575555893047,0.321321316421807,1.27746076687442,1.6025904330053,1.62886959353576,1.81467135269789,1.32745138339963,0.485561272309963,0,0.754420319023592,0,0.307435147943927,1.03371317267288,0.727067458955011,1.78248689192361,0.316036757935816,0,1.03135543248187,0,1.8006109403131,0.646793418913773,0,0.532020700926821,0.535106452806212,0.658196082408484,0.304464949114599,0.938686832254841,0.847328283455281,0.661585194164886,0.49465875882444,2.42196640043858,0.422190474497091,0.477489376012546,0.984845398470368,3.20628920292836,0,3.41741761595705,1.857481811669,0.555583582109135,2.26042148405629,1.91371918809435,1.83022538565218,0.679913719975421,0.139951452323658,0.829199842826543,0,2.21435195506795,0,0.108005340821801,0,0,0.809186078308924,0.41326727862668,0,0.90730481304255,0.621339313086926,15.2197093444731,1.345648914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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18458 | |||
|HGNC= | |||
|MCL_coexpression_id=773 | |||
|TSSclassifier=NA | |||
|UniProt=P29341,Q3V2M1 | |||
|association_with_transcript=337bp_to_ENSMUST00000001809,ENSMUST00000146327,NM_008774,uc007vmx.2,uc007vmy.2_5end | |||
|cluster_id=chr15:36538379..36538390,- | |||
|description=CAGE_peak_6_at_Pabpc1_5end | |||
|id=chr15:36538379..36538390,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.53e-09!193;UBERON:0004120!8.53e-09!193;UBERON:0006603!8.53e-09!193;UBERON:0001048!5.01e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.87e-07,120;UBERON:0004120,5.87e-07,120;UBERON:0006603,5.87e-07,120;UBERON:0001048,9.18e-07,134 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0.467225281191051,0.645616617207881,0.985521055061667,0.468129052643987,0,0.319088635981346,0.171200729931206,0.0874204024189974,1.99865857089398,0.404950534779652,1.39912375625629,1.26184866143295,0.411343300817216,0,2.63634199468316,0.595745707205312,0.261199789138935,0.47997726838022,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0,0,1.27006134691926,1.23012957516914,0,0.866554859253824,0.498703936075477,0.612508068787107,0.418531630736908,0,0,0,0,0,1.76255545165808,2.53442328048786,2.38610777810186,1.56478268869608,0.218025156380447,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0.336093799142464,1.02903774414379,1.43266719969378,1.03134418455488,0.606949382578793,0,0,2.03306719241479,0,1.3498495759221,0,2.1314403448383,0.299600110518405,1.92109152660777,0.311068836925433,1.08004750665353,0.420649922702764,0.285650984403804,0.220868540951614,0.61245399607477,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.395658863190582,0.274462930807229,0,0,0,0.45839474333043,0.294628585473668,0.284743361598206,0.372798891650601,0.227178579999552,0.453429360640713,0,0,4.0798280022465,1.07940638327563,1.94932925234301,0.896053774194671,0.702222100658759,0.170430322578058,0.519572009205738,0,0,0,0,0,0.216491041011214,0,1.01104889002957,2.2836775943812,0.776813650941515,0.148442139064825,0.867426633830679,0.913396434936424,2.07553947530453,0.301445281105245,1.64624189989987,0.628332956648377,0.494389935468748,0.144599356919912,2.65383165584962,1.29413479957927,1.98757366614354,1.93950101254089,0,0.292780797011547,1.67557365450764,1.78819938646014,0.599075622529601,0,0.381210681219194,0,0,0.376963056338593,0,0.511430914660661,0.20778804455956,0.162241263067758,0.611036183101898,2.11491850037158,0,0.420883711772948,2.08192708740326,0,0.360124259610698,0.150704817835715,0.680364991513279,0.512454881139399,0.655912071918102,0.517406741478031,1.29340795759705,0.945530400839096,1.23165786914764,1.09597866213787,1.39023624612799,0.696504333044333,0.61734640922383,1.59227413454795,0,0.51469581422943,0.284163499395593,1.03562886267751,0.938104239924385,0,1.18372367792605,0.590292695242212,0.308534225774757,0.232533944750408,0.536546802799238,0.467061369468678,0,0,0.405344047729279,0.292399974850665,0.219550115291051,0,0.210289948564127,0.411618449517138,0.660837565967596,0.528901133327089,0.639864751605702,0.232236671860439,0.257734922644187,1.21010114774006,0.444756087689741,0.190225626112559,2.37264530772256,0.494096864172033,0,0.994782360205754,0.19496408711912,5.39291645192533,1.72910439899755,1.7922714592893,3.98302592001472,0.342745537829186,2.25415471346161,0.407302655690628,0.581857461502877,1.1221731182451,0.252946148497029,0.738050739898011,0.156998727841375,0.246794327843601,0.296452627087149,1.33476084572875,1.96558995113203,1.79889689907883,1.82574109249653,0.964708639009667,1.01850340712568,1.72617682470486,8.75530224585191,1.09824565275233,0,1.86070473834252,0,0,0,1.4473305640901,0.369506380333209,0.568474235311454,0.651859905768103,0.509235257325564,0.704070744865506,0.837531287209079,0,2.14647012643579,0.472905432318573,0.44292937929755,0.478364305972461,1.47476983244164,0.518054945597687,0.289298117163023,1.50791283939272,0.54390568381871,0,1.65562047782839,0,0,2.13115428989678,0.757412781613119,0.631016438832513,0.390438744296638,0.430846795465598,0.716906393857656,0.891194696329576,0.566153061577665,0,0.876767573733936,0.790575555893047,0.321321316421807,1.27746076687442,1.6025904330053,1.62886959353576,1.81467135269789,1.32745138339963,0.485561272309963,0,0.754420319023592,0,0.307435147943927,1.03371317267288,0.727067458955011,1.78248689192361,0.316036757935816,0,1.03135543248187,0,1.8006109403131,0.646793418913773,0,0.532020700926821,0.535106452806212,0.658196082408484,0.304464949114599,0.938686832254841,0.847328283455281,0.661585194164886,0.49465875882444,2.42196640043858,0.422190474497091,0.477489376012546,0.984845398470368,3.20628920292836,0,3.41741761595705,1.857481811669,0.555583582109135,2.26042148405629,1.91371918809435,1.83022538565218,0.679913719975421,0.139951452323658,0.829199842826543,0,2.21435195506795,0,0.108005340821801,0,0,0.809186078308924,0.41326727862668,0,0.90730481304255,0.621339313086926,15.2197093444731,1.34564891439581,0.827292452285488,0.777804753376191,0.387479470433193,0.337912250981556,1.40828686374905,0.651021924219751,0.943734099831398,5.79801889982414,8.06484017522023,1.26404448251271,1.21635129174099,1.23253148597793,1.42912905275575,1.9692936523423,1.58945083825012,1.68273629327956,0.443068581523732,0.908698049533329,1.752756553065,0.705783295957884,0.682205165178267,0.962118416403295,1.63627663054197,1.36038230169127,2.88581739386284,1.70456327558004,2.18250001273302,0.386379188064381,0.750729901804728,2.01466786693992,3.00115730710692,1.50471631210609,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0.31136204275253,0,0.512200817262403,1.45864030240976,0.41922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| |||
|short_description=p6@Pabpc1 | |||
}} |
Latest revision as of 18:09, 26 September 2015
Short description: | p6@Pabpc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pabpc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:773 |
Association with transcript: | 337bp_to_ENSMUST00000001809, ENSMUST00000146327, NM_008774, uc007vmx.2, uc007vmy.2_5end |
EntrezGene: | Pabpc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesoderm | 5.87e-07 | 120 |
mesoderm-derived structure | 5.87e-07 | 120 |
presumptive mesoderm | 5.87e-07 | 120 |
primordium | 9.18e-07 | 134 |