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FFCP PHASE1:Mm9::chr9:45792860..45792891,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:45792860..45792891,-
|DHSsupport=NA
|short_description=p2@Pafah1b2
|DPIdataset=NA
|description=CAGE_peak_2_at_Pafah1b2_5end
|association_with_transcript=0bp_to_ENSMUST00000003215_5end
|EntrezGene=18475
|EntrezGene=18475
|HGNC=
|HGNC=
|MCL_coexpression_id=483
|TSSclassifier=NA
|UniProt=F8WIW7
|UniProt=F8WIW7
|association_with_transcript=0bp_to_ENSMUST00000003215_5end
|cluster_id=chr9:45792860..45792891,-
|description=CAGE_peak_2_at_Pafah1b2_5end
|id=chr9:45792860..45792891,-
|ontology_enrichment_celltype=CL:0000117!1.35e-12!23;CL:0000337!1.35e-12!23;CL:0000540!3.97e-11!33;CL:0000047!3.97e-11!33;CL:0000031!3.97e-11!33;CL:0000404!3.97e-11!33;CL:0000393!7.34e-11!39;CL:0000211!7.34e-11!39;CL:0000221!2.07e-07!44;CL:0000133!2.07e-07!44;CL:0002319!5.26e-07!43;CL:0000055!9.58e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-12,23;CL:0000337,1.35e-12,23;CL:0000540,3.97e-11,33;CL:0000047,3.97e-11,33;CL:0000031,3.97e-11,33;CL:0000404,3.97e-11,33;CL:0000393,7.34e-11,39;CL:0000211,7.34e-11,39;CL:0000221,2.07e-07,44;CL:0000133,2.07e-07,44;CL:0002319,5.26e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.13e-20,64;UBERON:0003075,1.13e-20,64;UBERON:0007284,1.13e-20,64;UBERON:0010314,2.51e-20,92;UBERON:0000073,4.01e-20,54;UBERON:0001017,1.11e-19,73;UBERON:0001016,4.60e-19,75;UBERON:0001049,9.25e-19,52;UBERON:0005068,9.25e-19,52;UBERON:0006241,9.25e-19,52;UBERON:0007135,9.25e-19,52;UBERON:0010371,1.66e-17,73;UBERON:0004121,1.57e-16,95;UBERON:0000924,1.57e-16,95;UBERON:0006601,1.57e-16,95;UBERON:0003056,2.09e-16,49;UBERON:0000955,1.51e-15,47;UBERON:0006238,1.51e-15,47;UBERON:0002616,1.55e-15,46;UBERON:0003080,4.91e-15,40;UBERON:0002780,1.18e-14,39;UBERON:0001890,1.18e-14,39;UBERON:0006240,1.18e-14,39;UBERON:0002020,5.32e-12,34;UBERON:0003528,1.28e-09,29;UBERON:0002791,1.28e-09,29;UBERON:0001893,1.28e-09,29;UBERON:0000025,8.74e-07,114
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3.1725626489115,6.98760203987768,9.03591120778299,6.69492991375221,2.87931536182433,1.94422459937689,2.4853572523477,16.9107881605257,14.054555328134,15.5530981029672,15.9449974442119,14.7242198764613,18.7541299294764,16.5473706490513,10.8069639420479,12.7928400199367,14.2534631287344,13.8254403003775,3.16011120628178,17.4343685149541,13.8659792172517,12.4723990058683,8.23522800070415,10.3314304486258,7.57231331975804,7.97523446742717,8.58214824559255,9.67826444518498,8.16692099608408,6.62713589030316,6.06134602334076,5.61009130471531,3.40095575422817,2.21985953374065,3.40912655116008,5.87596157274275,3.28422309854724,4.129014459926,3.6630324853453,2.57242054894879,2.00628841614145,16.3778034358949,21.6352861158373,25.7802981047728,19.0757032401493,16.4419804744954,12.8416962556249,19.5756525067224,14.4102785031751,19.4851235863208,15.0150490408028,22.314279730598,23.5424675306608,18.7806966329548,11.1829089851415,14.4633082213308,15.0751676929012,10.4455962066759,9.27157757575024,8.98573786857083,6.57012750585873,9.12525479604863,11.1289541417785,9.83235828433765,12.8050304809739,11.0850455084334,10.4784612082276,10.1978206831473,11.9603716687497,11.1263193216893,8.39033844766065,8.22886205724997,8.16388708332953,12.637118067208,10.0289027476307,11.104906889009,11.1691282417013,12.6220301282213,13.1534855718921,9.37048385536446,9.53941861818155,11.3889617399207,11.3280154731898,13.5046244245997,11.7751999301334,14.2750892126045,11.7410971630835,12.6323068560521,10.7435527024149,6.50380329034067,8.38247392654159,9.50658126043728
|phase1_expression=21.2997966649376,4.18770489167233,1.36499771816861,1.20985684522732,0.500895729946347,2.01455126294268,2.10251376535973,4.13194635013044,12.8117737158017,11.9372908424217,2.73948749160808,3.82906363177615,3.59521532855532,3.2345548895029,2.99798785634096,2.63217847606774,6.29605690315332,1.89277299214943,3.56497527374921,1.69755860719212,10.5453679787327,5.65958421845046,6.00759515019551,2.23989391910769,2.52350209173887,1.72269589234506,3.01533397311352,5.17130958446134,2.47030445293286,3.52842181663903,2.43903561720835,2.54012269383853,4.30545351309199,0,1.1554064790051,1.66234645358492,2.04169356262369,4.60384793810598,2.3440060335714,4.18818995179039,2.35292595212406,5.46436387966757,4.36959317728038,13.3450627054112,11.8611009526832,9.54443111240744,14.0830441982647,3.2703773457067,2.63623419281366,5.8328969722285,5.03951117851305,1.43752564364972,5.20126078778983,5.80289713609076,6.04968838456435,11.3194151855817,10.3152038377952,13.4074743992135,28.7289374420629,25.3915670050576,22.1840991227163,6.09920157724438,4.4464739805557,3.1496490104849,2.96659908770092,2.8419204597844,5.39280198933128,8.4528027170742,20.5305432370786,16.605730414798,18.9292465216244,17.9960120174396,22.5285911770646,16.6587486932338,18.3064849644831,12.8690630125403,28.6301290598411,24.6436562504412,23.962619187974,25.5859398196576,25.0676143470602,29.6920621217353,20.6595419261022,15.757353080887,22.9197371665215,18.2669722993674,19.2201769078789,26.8415201988433,8.17842887998388,7.02815508993105,7.8263411949453,3.44169550792555,3.39985666853875,0,1.29955283489534,0.448026887097336,3.08977724289854,3.2381761289831,2.85764605063156,3.18005617059306,20.703982707172,7.69958864485907,5.09610479413291,14.2213340630666,5.41227602528035,3.04031838570118,2.52762222507392,1.7127581957859,1.29468941823586,7.57054909230606,19.7773272513395,14.6143429589828,15.912469310668,13.1128697280782,14.1106448562846,6.40899615781345,9.64060374164058,2.16899035379867,7.07688441559899,11.6472131962135,6.8460870722722,4.84875253135222,0,12.296793474485,12.3573557019938,2.55457055208591,6.4700167233197,5.39912457894067,4.57452817463033,17.5255048103643,16.0125210986519,14.1989417887537,13.3844726548053,15.0872119824895,15.9996794310861,18.3332627266566,21.7936238639677,4.35424397135326,4.54900965180614,4.62972082950243,17.9566211288531,21.6107978167465,21.9675798362526,18.0845781402858,12.7908618404496,16.6547836370305,12.7434345401231,9.05461797586555,15.3053274982318,17.2086532952716,17.5951124163949,19.9468116509093,25.8583941779806,17.0643561595862,15.0220959577799,18.7092210809384,2.80885274925294,2.57347907114715,3.6941254921427,16.5700618028402,18.9966108584688,16.3856475929524,15.3884078130387,14.9540816128027,12.9584374825398,12.0917651270212,12.0723030629829,9.80828875884224,10.2027106946358,5.08919138645195,3.72916523910936,2.77779976108131,3.51280184465681,3.35516046900929,19.5569652164638,19.8605901892019,2.64335026387038,2.3800550999719,20.049095550312,19.9723537799977,13.5310834388198,10.8909103296605,12.2307924114679,12.5548913234289,3.32170343081158,11.5289268306808,8.54539709920916,9.74886713001639,8.96834800747953,2.69645822596266,2.80979464837102,1.59313018603494,21.8118086096044,16.2232887905815,16.9061603509621,7.94240178596726,12.2190066915604,10.8009162631091,6.19718063817721,3.09981310757165,2.98297582898612,3.57851775373222,1.1858105083486,10.8449318715461,10.2210677458866,13.4917267430912,13.7944882544182,13.9882752656402,7.38414970166117,5.17853047411459,5.67473293712624,4.66754402419738,5.75072826109418,2.60498663367952,2.18426371180192,3.78868316920668,2.33216637578486,1.92977408545347,4.24932337383191,19.7071068241304,13.3631280682461,10.0149600607361,11.7345124144251,9.38035041674168,5.71304738126433,8.00047956216975,7.25121662888479,6.42247599981447,7.17546458958692,4.09658286789345,5.00786447411097,4.91806799177139,4.52373851817817,2.17562273527484,1.47529281905711,4.41498794087572,22.3165320083031,25.5521476771003,13.7705354116407,2.01976741763498,12.6203287766503,12.4940398174924,15.2950612390287,8.60287672629187,6.90675889655422,8.49229592366497,10.5250782435473,8.18316402151673,11.4633455604492,12.5315313404505,3.83238230062325,21.9020692510724,21.3381916753185,4.61916344323099,1.32745138339963,16.9946445308487,12.9999129494843,9.05304382828311,9.7449624650655,12.604841065701,11.1124166062335,7.99774204850512,10.6949213515416,5.05658812697306,5.27093042874994,2.06271086496374,23.1498931912576,19.4465981553815,18.3689330971511,25.0774330986963,23.4089108407801,21.0475204770443,25.6696472139309,24.0527309800533,7.74416636610244,4.66030555900404,3.30792597082443,2.4732937941222,8.23468576149118,7.72005439080395,5.96861720015682,3.77524069413641,6.12109756922687,24.1052892613663,2.39219233116994,14.0343070214991,11.2968661695524,5.65105371014073,3.41735569302563,2.51655990527175,13.9382312594961,16.2343684695443,13.4053974590291,0.954670618015114,14.3932877079417,13.2157653632452,16.7408278273792,13.1725626489115,6.98760203987768,9.03591120778299,6.69492991375221,2.87931536182433,1.94422459937689,2.4853572523477,16.9107881605257,14.054555328134,15.5530981029672,15.9449974442119,14.7242198764613,18.7541299294764,16.5473706490513,10.8069639420479,12.7928400199367,14.2534631287344,13.8254403003775,3.16011120628178,17.4343685149541,13.8659792172517,12.4723990058683,8.23522800070415,10.3314304486258,7.57231331975804,7.97523446742717,8.58214824559255,9.67826444518498,8.16692099608408,6.62713589030316,6.06134602334076,5.61009130471531,3.40095575422817,2.21985953374065,3.40912655116008,5.87596157274275,3.28422309854724,4.129014459926,3.6630324853453,2.57242054894879,2.00628841614145,16.3778034358949,21.6352861158373,25.7802981047728,19.0757032401493,16.4419804744954,12.8416962556249,19.5756525067224,14.4102785031751,19.4851235863208,15.0150490408028,22.314279730598,23.5424675306608,18.7806966329548,11.1829089851415,14.4633082213308,15.0751676929012,10.4455962066759,9.27157757575024,8.98573786857083,6.57012750585873,9.12525479604863,11.1289541417785,9.83235828433765,12.8050304809739,11.0850455084334,10.4784612082276,10.1978206831473,11.9603716687497,11.1263193216893,8.39033844766065,8.22886205724997,8.16388708332953,12.637118067208,10.0289027476307,11.104906889009,11.1691282417013,12.6220301282213,13.1534855718921,9.37048385536446,9.53941861818155,11.3889617399207,11.3280154731898,13.5046244245997,11.7751999301334,14.2750892126045,11.7410971630835,12.6323068560521,10.7435527024149,6.50380329034067,8.38247392654159,9.50658126043728
|short_description=p2@Pafah1b2
}}
}}

Latest revision as of 17:59, 26 September 2015

Short description:p2@Pafah1b2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pafah1b2_5end
Coexpression cluster:MCL_coexpression_mm9:483
Association with transcript: 0bp_to_ENSMUST00000003215_5end
EntrezGene:Pafah1b2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pafah1b2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.30
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I25.17
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.86
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C328.73
Mouse Granule cells, donor2.CNhs12357.11731-123E325.39
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.66
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.07
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.84
Mouse Schwann, donor1.CNhs12507.11728-123D98.18
Mouse Schwann, donor2.CNhs12573.11746-123F97.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D77.57
adrenal gland, embryo E14.CNhs11038.406-44C519.78
adrenal gland, embryo E16.CNhs11004.1254-43D614.61
adrenal gland, embryo E17.CNhs11043.1263-45I115.91
adrenal gland, embryo E18.CNhs11026.1262-18F513.11
adrenal gland, neonate N00.CNhs11191.1311-23C114.11
adrenal gland, neonate N25.CNhs11223.1377-27I36.41
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F511.65
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I212.36
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.47
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.57
corpora quadrigemina, adult.CNhs10501.16-22A417.53
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F114.20
cortex, adult.CNhs10473.12-14D513.38
cortex, neonate N30.CNhs11107.1392-42F215.09
diencephalon, adult.CNhs10482.20-12F216.00
diencephalon, neonate N30.CNhs11201.1388-42B218.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.35
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C617.96
eyeball, embryo E14.CNhs10521.399-16E221.61
eyeball, embryo E15.CNhs10593.426-16C921.97
eyeball, embryo E17.CNhs11023.1261-18D418.08
eyeball, neonate N00.CNhs11207.633-15C612.79
eyeball, neonate N01.CNhs11140.1532-43E716.65
eyeball, neonate N02.CNhs11205.1551-44G812.74
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H217.21
forelimb, embryo E13.CNhs10589.384-1E217.60
forelimb, embryo E14.CNhs10577.413-26A819.95
forelimb, embryo E15.CNhs11007.437-20E725.86
forelimb, embryo E17.CNhs10598.1517-43C417.06
forelimb, embryo E18.CNhs11008.1520-43B515.02
gonad, embryo E13.CNhs11044.1564-45I618.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E916.57
heart, embryo E12.CNhs11015.353-12F519.00
heart, embryo E13.CNhs11013.376-3I916.39
heart, embryo E14.CNhs10597.403-26D415.39
heart, embryo E15.CNhs11017.431-16C814.95
heart, embryo E16.CNhs11021.457-17C612.96
heart, embryo E17.CNhs11025.479-18E512.09
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E39.81
heart, neonate N03.CNhs11221.1349-25I210.20
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G13.73
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E819.56
hippocampus, neonate N00.CNhs11228.627-43G119.86
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I520.05
intestine, embryo E13.CNhs11010.381-16D519.97
intestine, embryo E15.CNhs10602.976-16D813.53
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D312.23
intestine, embryo E18.CNhs10526.1289-20F712.55
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E911.53
intestine, neonate N06.CNhs11102.688-20B88.55
intestine, neonate N07.CNhs11095.720-20F29.75
intestine, neonate N10.CNhs11098.755-23A58.97
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I921.81
kidney, embryo E15.CNhs10997.434-16F816.22
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C712.22
kidney, neonate N00.CNhs11214.646-21G710.80
kidney, neonate N10.CNhs11206.758-6D56.20
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F810.84
liver, embryo E13.CNhs10524.378-3H610.22
liver, embryo E14.CNhs10594.409-16E113.49
liver, embryo E15.CNhs10520.433-16D713.79
liver, embryo E16.CNhs10523.462-17F513.99
liver, embryo E17.CNhs10510.481-18A37.38
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F45.67
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G219.71
lung, embryo E14.CNhs10604.404-26F813.36
lung, embryo E15.CNhs11020.432-17C510.01
lung, embryo E16.CNhs10998.458-17B611.73
lung, embryo E17.CNhs10605.480-44A69.38
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E57.25
lung, neonate N07.CNhs11111.715-19A36.42
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A44.10
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C222.32
medulla oblongata, neonate N30.CNhs11200.1396-42A325.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I73.83
ovary, embryo E18.CNhs11040.505-44H721.90
ovary, neonate N00.CNhs11217.1299-22I421.34
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F416.99
pancreas, embryo E15.CNhs11042.1556-45F213.00
pancreas, embryo E16.CNhs11003.460-26E59.05
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I712.60
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D810.69
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G823.15
pituitary gland, embryo E12.CNhs11018.346-16E619.45
pituitary gland, embryo E13.CNhs11009.370-44C718.37
pituitary gland, embryo E14.CNhs11037.398-44A525.08
pituitary gland, embryo E15.CNhs10592.427-16B923.41
pituitary gland, embryo E16.CNhs11036.449-43F621.05
pituitary gland, embryo E17.CNhs11039.1265-44F525.67
pituitary gland, neonate N00.CNhs11190.1308-22E924.05
placenta, adult pregnant day10.CNhs10472.539-13I77.74
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H37.72
skin, neonate N06.CNhs11097.693-20I55.97
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C924.11
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C114.03
spleen, embryo E18.CNhs11011.1271-21F211.30
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E314.39
stomach, embryo E15.CNhs10603.1252-16G813.22
stomach, embryo E16.CNhs11022.459-17D416.74
stomach, embryo E17.CNhs11006.1035-18D513.17
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A96.69
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G516.91
testis, embryo E13.CNhs11031.389-23F514.05
testis, embryo E15.CNhs11034.443-27C515.55
testis, embryo E16.CNhs11033.470-26G515.94
testis, embryo E17.CNhs11029.486-18I514.72
testis, embryo E18.CNhs11027.503-18G518.75
testis, neonate N00.CNhs11189.1300-22B716.55
testis, neonate N07.CNhs11222.726-26I410.81
testis, neonate N10.CNhs11204.763-44D912.79
testis, neonate N20.CNhs11110.839-18H314.25
testis, neonate N30.CNhs11130.1391-42E213.83
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I417.43
thymus, embryo E15.CNhs11005.430-45I213.87
thymus, embryo E16.CNhs11002.456-26C512.47
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G410.33
thymus, neonate N02.CNhs11181.1541-43F87.57
thymus, neonate N03.CNhs11137.2104-43C77.98
thymus, neonate N06.CNhs11197.681-26C48.58
thymus, neonate N07.CNhs11211.713-19D39.68
thymus, neonate N10.CNhs11194.748-24E48.17
thymus, neonate N20.CNhs11186.820-7A26.63
thymus, neonate N25.CNhs11125.1362-25G76.06
thymus, neonate N30.CNhs11132.1393-42G25.61
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.41
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.88
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.78
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I822.31
whole body, embryo E12.CNhs10587.857-27C923.54
whole body, embryo E13.CNhs10512.372-23H218.78
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B114.46
whole body, embryo E16.CNhs10514.453-14F215.08
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.83
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.10
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.62
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.78
whole body, embryo E17.5.CNhs10513.490-9F914.28
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B312.63
whole body, neonate N00.CNhs10525.657-19C210.74
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B49.51





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.35e-1223
neuroblast (sensu Vertebrata)1.35e-1223
neuron3.97e-1133
neuronal stem cell3.97e-1133
neuroblast3.97e-1133
electrically signaling cell3.97e-1133
electrically responsive cell7.34e-1139
electrically active cell7.34e-1139
ectodermal cell2.07e-0744
neurectodermal cell2.07e-0744
neural cell5.26e-0743

Uber anatomy
Ontology termp-valuen
neurectoderm1.13e-2064
neural plate1.13e-2064
presumptive neural plate1.13e-2064
structure with developmental contribution from neural crest2.51e-2092
regional part of nervous system4.01e-2054
central nervous system1.11e-1973
nervous system4.60e-1975
neural tube9.25e-1952
neural rod9.25e-1952
future spinal cord9.25e-1952
neural keel9.25e-1952
ecto-epithelium1.66e-1773
ectoderm-derived structure1.57e-1695
ectoderm1.57e-1695
presumptive ectoderm1.57e-1695
pre-chordal neural plate2.09e-1649
brain1.51e-1547
future brain1.51e-1547
regional part of brain1.55e-1546
anterior neural tube4.91e-1540
regional part of forebrain1.18e-1439
forebrain1.18e-1439
future forebrain1.18e-1439
gray matter5.32e-1234
brain grey matter1.28e-0929
regional part of telencephalon1.28e-0929
telencephalon1.28e-0929
tube8.74e-07114
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