FFCP PHASE1:Mm9::chr15:34608631..34608647,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=223473|HGNC=|MCL_coexpression_id=85|UniProt=Q91WC7|association_with_transcript=-170bp_to_ENSMUST00000040791,NM_145469,uc007vlw.1,uc007vlx.1_5end|description=CAGE_peak_3_at_Nipal2_5end|id=chr15:34608631..34608647,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.02e-11!59;UBERON:0007023!3.68e-11!51;UBERON:0002108!5.65e-10!16;UBERON:0000160!5.79e-10!43;UBERON:0001045!2.92e-09!13;UBERON:0001264!1.15e-08!12;UBERON:0003922!1.15e-08!12;UBERON:0002114!1.15e-08!12;UBERON:0003923!1.15e-08!12;UBERON:0003924!1.15e-08!12;UBERON:0003921!1.15e-08!12;UBERON:0005153!3.37e-07!17;UBERON:0000464!7.30e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.56e-14,51;UBERON:0001264,4.28e-10,12;UBERON:0005153,2.46e-08,17|phase1_expression=0.640595388419176,1.74487703819681,0.909998478779072,0,0.500895729946347,4.53274034162102,7.47560449905682,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,2.55987876469451,1.83527424853736,1.14846392823004,2.58457197695445,1.07735616342945,2.28028103347649,2.77233142735924,4.8780712344167,0,0,0,1.1554064790051,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0.979904951377538,1.43752564364972,0,0,0,0,0,0.515672092277442,2.42779753031517,1.05798195854407,3.80298842103708,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,0,0.518448061542388,0,0.210324961351382,1.14260393761521,1.10434270475807,0.734944795289724,0.862609239164127,0.919218786610021,3.30347642998166,2.42605942361857,3.07213066512487,1.71452174049252,2.10421580285542,2.08365348222704,3.07101298901519,4.50210088025344,3.20876320331301,2.06240009831567,2.27794689278565,0.559198337475902,0.075726193333184,0.226714680320357,9.85539261585705,0,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,1.73192832808971,1.26679932737549,1.01104889002957,2.51204535381932,0,2.67195850316685,0.173485326766136,0.304465478312141,0.691846491768175,0.904335843315735,1.17588707135705,1.25666591329675,1.97755974187499,1.01219549843938,0,0.485300549842228,0,0,7.45567044872489,5.5628351432194,3.97948742945565,2.29911349687732,0,0,0,2.69623150928681,4.11750542536764,1.7591609295801,1.39059456153821,2.04572365864264,3.74018480207208,3.0825839982874,1.12023300235348,0.746441823660558,4.80173241023982,9.46988351489133,0,0.459804208866946,0.180062129805349,0.452114453507145,1.02054748726992,0.768682321709099,0.937017245597288,3.10444044886819,0,0.189106080167819,0.703804496655795,0.219195732427575,0.278047249225598,1.0447564995665,1.64625709126355,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,1.18372367792605,0.787056926989615,0.462801338662135,0.465067889500816,0.536546802799238,1.28441876603886,0.493679549740441,0,0.405344047729279,0.438599962275997,0,0.134206418760372,1.47202963994889,0.205809224758569,2.31293148088659,1.85115396664481,0.213288250535234,0.928946687441754,1.15980715189884,0.605050573870028,0.444756087689741,1.90225626112559,2.84717436926707,1.64698954724011,1.75934646160189,1.98956472041151,0.974820435595601,1.79763881730844,1.29682829924817,1.99141273254367,0.379335801906163,0.342745537829186,2.25415471346161,1.22190796707189,0.193952487167626,0.911765658574141,1.64414996523069,0.885660887877613,0.941992367048249,1.48076596706161,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,4.61882975416512,1.70542270593436,1.79261474086228,1.18821560042632,2.11221223459652,2.34508760418542,1.90434912708811,2.34160377429359,2.83743259391144,3.10050565508285,2.39182152986231,3.60499292374624,3.28101465545202,2.60368305446721,0,0,3.93411418415229,4.13905119457099,2.0871576698413,1.87538698547525,0,0,0.315508219416257,0,0.215423397732799,0,0,0.283076530788832,0,0,0,2.89189184779626,1.56134093729095,0.178065603667255,0.651547837414304,1.48473110675282,11.9470624505967,2.42780636154981,3.62788268357701,9.8074641473067,16.2416041084425,23.3650712437385,14.4719844174204,9.81541069589265,3.56497378384721,12.009396801561,15.8127912862498,12.3762651897824,3.40439605753788,0.18006109403131,0.258717367565509,0.214337035031592,1.06404140185364,0.713475270408282,0.822745103010605,1.522324745573,0.23467170806371,1.0591603543191,16.0985730580122,2.80306630000516,1.29171541356724,1.68876189798836,1.90995750405018,3.77524069413641,2.04036585640896,3.33765543618917,0,0.412773735926445,0.740778109478847,0.188368457004691,0.27338845544205,0,0,0,0,21.0027535963325,0.790839983952838,2.23651413839534,2.80813886136683,2.92723614420256,4.58561383866973,8.09186078308924,6.69492991375221,13.8730649251536,5.31421390496351,9.32008969630389,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.168956125490778,0.821500670520278,0.39061315453185,0.524296722128554,0.241584120826006,0.864090018773596,0.316011120628178,0.202725215290164,0.513554785824136,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.0962118416403295,0,1.81384306892169,0.221985953374065,0,0.503653849092235,2.70465431645067,1.87682475451182,1.09890974560359,2.35805216986972,17.5550236412377,1.6942555278512,2.30162618253588,1.71868654031819,2.06223818812425,2.74033007908257,1.5107877947794,0.675022500231806,1.80128481289688,2.26571204492102,2.07104124700728,0,0.399024873401031,1.02440163452481,0.243106717068294,0.209613162627982,0.551530525350042,0.888986911206461,1.23621034343337,0.962757628775446,1.26348605881899,2.28131369901216,1.32038438970253,0.561849044819294,1.08842759088278,0.746661096422973,0.952587382566147,1.50649623728312,1.15745532278223,0,0.735994600671987,1.02860775715625,0.887379030796687,1.1921809497366,1.45346416632329,1.12931256498397,0.761531471025089,0.914639864363863,1.57841826862706,1.22223702461276,2.24456908663095,1.06771516311757,1.18205378850676,0.409231043169689,0.619747364743864,2.12197272079256,2.49810577937946,1.87145286756327,1.93383948643468,0.382576664137687,0.441182838239031,0|short_description=p3@Nipal2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=223473 | |||
|HGNC= | |||
|MCL_coexpression_id=85 | |||
|TSSclassifier=NA | |||
|UniProt=Q91WC7 | |||
|association_with_transcript=-170bp_to_ENSMUST00000040791,NM_145469,uc007vlw.1,uc007vlx.1_5end | |||
|cluster_id=chr15:34608631..34608647,- | |||
|description=CAGE_peak_3_at_Nipal2_5end | |||
|id=chr15:34608631..34608647,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.02e-11!59;UBERON:0007023!3.68e-11!51;UBERON:0002108!5.65e-10!16;UBERON:0000160!5.79e-10!43;UBERON:0001045!2.92e-09!13;UBERON:0001264!1.15e-08!12;UBERON:0003922!1.15e-08!12;UBERON:0002114!1.15e-08!12;UBERON:0003923!1.15e-08!12;UBERON:0003924!1.15e-08!12;UBERON:0003921!1.15e-08!12;UBERON:0005153!3.37e-07!17;UBERON:0000464!7.30e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.56e-14,51;UBERON:0001264,4.28e-10,12;UBERON:0005153,2.46e-08,17 | |||
|phase1_expression=0.640595388419176,1.74487703819681,0.909998478779072,0,0.500895729946347,4.53274034162102,7.47560449905682,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,2.55987876469451,1.83527424853736,1.14846392823004,2.58457197695445,1.07735616342945,2.28028103347649,2.77233142735924,4.8780712344167,0,0,0,1.1554064790051,1.16364251750945,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0.979904951377538,1.43752564364972,0,0,0,0,0,0.515672092277442,2.42779753031517,1.05798195854407,3.80298842103708,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,0,0.518448061542388,0,0.210324961351382,1.14260393761521,1.10434270475807,0.734944795289724,0.862609239164127,0.919218786610021,3.30347642998166,2.42605942361857,3.07213066512487,1.71452174049252,2.10421580285542,2.08365348222704,3.07101298901519,4.50210088025344,3.20876320331301,2.06240009831567,2.27794689278565,0.559198337475902,0.075726193333184,0.226714680320357,9.85539261585705,0,0,0,0,0,0.702222100658759,0,0,0,0.563373679106722,0,0,0,1.73192832808971,1.26679932737549,1.01104889002957,2.51204535381932,0,2.67195850316685,0.173485326766136,0.304465478312141,0.691846491768175,0.904335843315735,1.17588707135705,1.25666591329675,1.97755974187499,1.01219549843938,0,0.485300549842228,0,0,7.45567044872489,5.5628351432194,3.97948742945565,2.29911349687732,0,0,0,2.69623150928681,4.11750542536764,1.7591609295801,1.39059456153821,2.04572365864264,3.74018480207208,3.0825839982874,1.12023300235348,0.746441823660558,4.80173241023982,9.46988351489133,0,0.459804208866946,0.180062129805349,0.452114453507145,1.02054748726992,0.768682321709099,0.937017245597288,3.10444044886819,0,0.189106080167819,0.703804496655795,0.219195732427575,0.278047249225598,1.0447564995665,1.64625709126355,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.36012412292203,1.18372367792605,0.787056926989615,0.462801338662135,0.465067889500816,0.536546802799238,1.28441876603886,0.493679549740441,0,0.405344047729279,0.438599962275997,0,0.134206418760372,1.47202963994889,0.205809224758569,2.31293148088659,1.85115396664481,0.213288250535234,0.928946687441754,1.15980715189884,0.605050573870028,0.444756087689741,1.90225626112559,2.84717436926707,1.64698954724011,1.75934646160189,1.98956472041151,0.974820435595601,1.79763881730844,1.29682829924817,1.99141273254367,0.379335801906163,0.342745537829186,2.25415471346161,1.22190796707189,0.193952487167626,0.911765658574141,1.64414996523069,0.885660887877613,0.941992367048249,1.48076596706161,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,4.61882975416512,1.70542270593436,1.79261474086228,1.18821560042632,2.11221223459652,2.34508760418542,1.90434912708811,2.34160377429359,2.83743259391144,3.10050565508285,2.39182152986231,3.60499292374624,3.28101465545202,2.60368305446721,0,0,3.93411418415229,4.13905119457099,2.0871576698413,1.87538698547525,0,0,0.315508219416257,0,0.215423397732799,0,0,0.283076530788832,0,0,0,2.89189184779626,1.56134093729095,0.178065603667255,0.651547837414304,1.48473110675282,11.9470624505967,2.42780636154981,3.62788268357701,9.8074641473067,16.2416041084425,23.3650712437385,14.4719844174204,9.81541069589265,3.56497378384721,12.009396801561,15.8127912862498,12.3762651897824,3.40439605753788,0.18006109403131,0.258717367565509,0.214337035031592,1.06404140185364,0.713475270408282,0.822745103010605,1.522324745573,0.23467170806371,1.0591603543191,16.0985730580122,2.80306630000516,1.29171541356724,1.68876189798836,1.90995750405018,3.77524069413641,2.04036585640896,3.33765543618917,0,0.412773735926445,0.740778109478847,0.188368457004691,0.27338845544205,0,0,0,0,21.0027535963325,0.790839983952838,2.23651413839534,2.80813886136683,2.92723614420256,4.58561383866973,8.09186078308924,6.69492991375221,13.8730649251536,5.31421390496351,9.32008969630389,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.168956125490778,0.821500670520278,0.39061315453185,0.524296722128554,0.241584120826006,0.864090018773596,0.316011120628178,0.202725215290164,0.513554785824136,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.0962118416403295,0,1.81384306892169,0.221985953374065,0,0.503653849092235,2.70465431645067,1.87682475451182,1.09890974560359,2.35805216986972,17.5550236412377,1.6942555278512,2.30162618253588,1.71868654031819,2.06223818812425,2.74033007908257,1.5107877947794,0.675022500231806,1.80128481289688,2.26571204492102,2.07104124700728,0,0.399024873401031,1.02440163452481,0.243106717068294,0.209613162627982,0.551530525350042,0.888986911206461,1.23621034343337,0.962757628775446,1.26348605881899,2.28131369901216,1.32038438970253,0.561849044819294,1.08842759088278,0.746661096422973,0.952587382566147,1.50649623728312,1.15745532278223,0,0.735994600671987,1.02860775715625,0.887379030796687,1.1921809497366,1.45346416632329,1.12931256498397,0.761531471025089,0.914639864363863,1.57841826862706,1.22223702461276,2.24456908663095,1.06771516311757,1.18205378850676,0.409231043169689,0.619747364743864,2.12197272079256,2.49810577937946,1.87145286756327,1.93383948643468,0.382576664137687,0.441182838239031,0 | |||
|short_description=p3@Nipal2 | |||
}} |
Latest revision as of 17:46, 26 September 2015
Short description: | p3@Nipal2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nipal2_5end |
Coexpression cluster: | MCL_coexpression_mm9:85 |
Association with transcript: | -170bp_to_ENSMUST00000040791, NM_145469, uc007vlw.1, uc007vlx.1_5end |
EntrezGene: | Nipal2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.56e-14 | 51 |
pancreas | 4.28e-10 | 12 |
epithelial bud | 2.46e-08 | 17 |