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FFCP PHASE1:Mm9::chr17:57226980..57227035,-: Difference between revisions

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(Created page with "{{FFCP |id=chr17:57226980..57227035,- |short_description=p1@Tubb4a |description=CAGE_peak_1_at_Tubb4a_5end |association_with_transcript=169bp_to_ENSMUST00000071135,NM_0094...")
 
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{{FFCP
{{FFCP
|id=chr17:57226980..57227035,-
|DHSsupport=NA
|short_description=p1@Tubb4a
|DPIdataset=NA
|description=CAGE_peak_1_at_Tubb4a_5end
|association_with_transcript=169bp_to_ENSMUST00000071135,NM_009451,uc008dea.1_5end
|EntrezGene=22153
|EntrezGene=22153
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9D6F9,Q99J49
|UniProt=Q9D6F9,Q99J49
|association_with_transcript=169bp_to_ENSMUST00000071135,NM_009451,uc008dea.1_5end
|cluster_id=chr17:57226980..57227035,-
|description=CAGE_peak_1_at_Tubb4a_5end
|id=chr17:57226980..57227035,-
|ontology_enrichment_celltype=CL:0000540!1.05e-14!33;CL:0000047!1.05e-14!33;CL:0000031!1.05e-14!33;CL:0000404!1.05e-14!33;CL:0000221!7.06e-14!44;CL:0000133!7.06e-14!44;CL:0002319!9.16e-14!43;CL:0000393!1.29e-13!39;CL:0000211!1.29e-13!39;CL:0000117!7.57e-13!23;CL:0000337!7.57e-13!23;CL:0000055!9.97e-13!50
|ontology_enrichment_celltype_v019_2=CL:0000540,7.90e-15,33;CL:0000047,7.90e-15,33;CL:0000031,7.90e-15,33;CL:0000404,7.90e-15,33;CL:0000221,5.43e-14,44;CL:0000133,5.43e-14,44;CL:0002319,7.06e-14,43;CL:0000393,9.97e-14,39;CL:0000211,9.97e-14,39;CL:0000117,5.95e-13,23;CL:0000337,5.95e-13,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.80e-32,75;UBERON:0001017,4.07e-32,73;UBERON:0004121,5.80e-31,95;UBERON:0000924,5.80e-31,95;UBERON:0006601,5.80e-31,95;UBERON:0002346,1.52e-29,64;UBERON:0003075,1.52e-29,64;UBERON:0007284,1.52e-29,64;UBERON:0000073,5.45e-26,54;UBERON:0010371,1.46e-25,73;UBERON:0001049,1.31e-24,52;UBERON:0005068,1.31e-24,52;UBERON:0006241,1.31e-24,52;UBERON:0007135,1.31e-24,52;UBERON:0010314,6.58e-24,92;UBERON:0003056,4.65e-22,49;UBERON:0000955,1.28e-21,47;UBERON:0006238,1.28e-21,47;UBERON:0002616,5.08e-21,46;UBERON:0003080,1.30e-18,40;UBERON:0002780,6.76e-18,39;UBERON:0001890,6.76e-18,39;UBERON:0006240,6.76e-18,39;UBERON:0002020,2.09e-17,34;UBERON:0003528,8.52e-15,29;UBERON:0002791,8.52e-15,29;UBERON:0001893,8.52e-15,29;UBERON:0000956,2.51e-10,21;UBERON:0001869,2.51e-10,21;UBERON:0000203,2.51e-10,21;UBERON:0000025,3.80e-09,114;UBERON:0002619,1.64e-08,17;UBERON:0004111,1.78e-08,122;UBERON:0002021,3.23e-07,10;UBERON:0000411,3.23e-07,10;UBERON:0001950,3.23e-07,10
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35363,1221.55823558071,1007.65194271421,1113.70887812619,552.507981234956,807.027208289817,777.300320414002,795.176505273067,763.744760668278,768.982668046195,802.010722903569,54.7997195244453,100.953292970461,74.9520529260649,41.32814190161,65.6089199025585,47.6154686885537,70.2299659853104,64.9010430302517,79.2670447691784,60.1419363997838,78.3251036660841,67.5282302162153,47.8508103171099,56.5982347259044,49.7965515845167,50.9634249672889,55.2768234756961,53.4358540684463,44.5052772867571,58.7323691336245,51.0875186054269,41.3518628351256,45.7797484698856,55.2316383202848,53.2659093150771,54.661036698023,57.2564555091778,51.2985937303794,55.6796866768033,78.5599180320834,59.7920491345838,55.2610146126911,45.8338768350052,48.1853576088354,39.9316684730963,190.605470966653,51.6988854664353,58.6597977551854,30.6061331310149,50.5154349783691,58.4306945763462
|phase1_expression=38.7560209993601,0.348975407639361,0.454999239389536,0,0.500895729946347,2.51818907867835,2.33612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,165.069026183226,0,0,0.799962113967033,0.91763712426868,0,0,0,0.570070258369122,0.252030129759931,0.886922042621219,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,17.3737608806297,20.3767631751224,13.5824596599644,18.7773922643529,12.4274339136855,9.00713349211335,11.4713640453827,3.91961980551015,12.9377307928474,0,0,0,9.26133969729409,22.9226751951005,13.4074743992135,301.85615960252,440.649485733603,321.986352981139,5.76035704517525,0.889294796111139,0,2.96659908770092,0.7104801149461,199.234073494739,264.726412366551,122.768500973238,178.0728326595,155.640471400023,477.60844592316,506.672432943001,140.129474301907,130.062304171747,172.813131882684,1368.7404008224,1192.47205037757,1152.04899942183,361.895973531652,338.138330754506,272.437692801185,1401.21947198793,766.482674863148,953.308267879518,271.352927221248,227.509945916967,295.256722187276,8.78423842664935,82.7508583169301,7.24661221754194,5.16254326188832,4.0798280022465,2.15881276655127,0,0,53.6497684903292,0,0,0,43.9431469703243,0,0,0,0.649473123033642,0,0,29.6878087269556,0.258937883647172,5.78924342352817,26.5432549952188,63.3288194889254,36.8984795609694,34.0633167648927,36.5700879192042,6.1576629751541,10.1349936771093,18.7979163995885,0,4.20593809863264,2.65009822152472,2.42437626567611,13.0474232852686,1274.18202859425,1395.12451408442,4.59822699375465,0.479260498023681,1.19980546198682,0.254140454146129,1418.81693644248,1221.06910892291,192.376813084795,953.252571934444,1035.13617127318,1445.99700208998,1410.85002363722,13.6464747559424,2.61254638281195,0.505445516867349,59.9759289276451,45.0216732650955,106.214772248264,116.320135854256,101.122932767765,138.590348771255,121.195579389468,108.225491866487,268.792802197837,8.40715172438085,14.1829560125864,12.3165786914764,10.302199424096,5.83899223373756,6.268538997399,7.81972118350185,8.16040493955822,0,0.51469581422943,0.568326998791185,10.3562886267751,15.2441938987713,9.36322719597277,9.70653415899362,6.49321964766433,4.47374627373397,4.18561100550734,6.70683503499048,4.67061369468678,9.87359099480883,20.685100473966,12.6467342891535,10.5263990946239,13.8316572633362,7.1129401942997,852.515451478972,398.652468357348,0.330418782983798,5.02456076660734,23.4617075588757,27.6361639513922,24.0982152672315,19.9666689377109,14.8993289376063,19.2127882373685,10.4396393539793,17.7874871101932,16.0854533632172,15.3196483471686,18.3266241891973,10.7858329038507,6.91641759599022,6.17337947088538,22.3808123124636,17.2515254040691,20.2873924211545,14.4592442770173,16.0980564349129,11.4321386421219,19.7930361198925,3.24742325555125,4.08196692387575,3.57851775373222,1.1858105083486,1.83529616287703,2.55526693647164,1.79889689907883,1.42002084971952,0.964708639009667,0.763877555344259,1.15078454980324,0.972811360650212,0.823684239564244,1.43768206527355,4.83783231969054,2.49630138491648,1.76805214562978,2.51156378930677,0.482443521363367,39.1676763153202,21.7915123536057,19.3928321966011,14.2585872051158,9.38760993154008,7.87279409976534,11.4260947625287,12.4885534628991,31.369393677132,38.7563206885356,47.8364305972461,53.0917139678991,39.5448608472901,19.9615700842486,0,0.54390568381871,4.42587845717133,3.31124095565679,2138.21275745741,2217.4106869513,0,8.33154059774431,68.1497753939114,71.4502902062848,112.666437014254,33.9335693092624,40.7721573570781,42.178403087536,64.3649015663082,79.7858492097881,94.8690667071656,535.963955791574,3.83238230062325,17.2723635557238,10.9134262766896,20.6212653715669,0,17.9657670754686,10.2790009368015,5.46954731292105,10.6308681437078,10.4527950300935,8.5281336745513,5.45300594216258,11.4079161083111,6.32073515871632,7.37930260024991,8.25084345985495,50.3850616515606,48.0763121063598,54.5893645563224,45.225114391666,40.4335732704384,94.8922109643015,103.99498102054,172.022696249749,73.9215880400688,52.958017715955,19.1859706307817,3.62749756471256,3.39075296061402,7.53911561601948,4.65552141612232,5.41664969158702,8.16146342563582,2286.10854848757,0.170870880797853,4.95328483111734,1.66675074632741,1.31857919903284,0.820165366326151,0.686334519619568,2.37969801991397,1.39951452323658,1.52019971184866,13.3653886522116,31.6335993581135,23.5850581867144,14.3647103292996,12.7543860568826,12.2283035697859,15.2396711414847,22.0684726786647,12.5642852152334,12.4430374360121,1.24267862617385,0,2.8408143748356,4.30192075188454,4.27792614356905,4.90807329215378,2.70329800785245,4.22486059124714,3.1249052362548,0.629156066554265,0,1.44015003128933,0.632022241256357,11.7580624868295,6.7789231728786,0.909445760844565,2.32734704367726,2.38417625737518,1.08175904567972,1.9199638532695,1.31256384932592,1.143102099825,1.00826185136841,0.974578807397524,1.05833025804362,0.584384510907845,3.62768613784338,0.221985953374065,0,0.503653849092235,16.8074946808006,97.7825697100658,10.2564909589668,4.28736758158132,0.501572104035363,1221.55823558071,1007.65194271421,1113.70887812619,552.507981234956,807.027208289817,777.300320414002,795.176505273067,763.744760668278,768.982668046195,802.010722903569,54.7997195244453,100.953292970461,74.9520529260649,41.32814190161,65.6089199025585,47.6154686885537,70.2299659853104,64.9010430302517,79.2670447691784,60.1419363997838,78.3251036660841,67.5282302162153,47.8508103171099,56.5982347259044,49.7965515845167,50.9634249672889,55.2768234756961,53.4358540684463,44.5052772867571,58.7323691336245,51.0875186054269,41.3518628351256,45.7797484698856,55.2316383202848,53.2659093150771,54.661036698023,57.2564555091778,51.2985937303794,55.6796866768033,78.5599180320834,59.7920491345838,55.2610146126911,45.8338768350052,48.1853576088354,39.9316684730963,190.605470966653,51.6988854664353,58.6597977551854,30.6061331310149,50.5154349783691,58.4306945763462
|short_description=p1@Tubb4a
}}
}}

Latest revision as of 17:42, 26 September 2015

Short description:p1@Tubb4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tubb4a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 169bp_to_ENSMUST00000071135, NM_009451, uc008dea.1_5end
EntrezGene:Tubb4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tubb4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G738.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3165.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.38
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.43
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.92
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C3301.86
Mouse Granule cells, donor2.CNhs12357.11731-123E3440.65
Mouse Granule cells, donor3.CNhs12108.11636-122C7321.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C8199.23
Mouse Microglia, donor2.CNhs12634.11736-123E8264.73
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5122.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5178.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9155.64
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1477.61
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5506.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2140.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2130.06
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6172.81
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31368.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31192.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71152.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4361.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4338.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8272.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41401.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5766.48
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6953.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6271.35
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6227.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1295.26
Mouse Schwann, donor1.CNhs12507.11728-123D98.78
Mouse Schwann, donor2.CNhs12573.11746-123F982.75
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A753.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G643.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B629.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C526.54
adrenal gland, embryo E16.CNhs11004.1254-43D663.33
adrenal gland, embryo E17.CNhs11043.1263-45I136.90
adrenal gland, embryo E18.CNhs11026.1262-18F534.06
adrenal gland, neonate N00.CNhs11191.1311-23C136.57
adrenal gland, neonate N25.CNhs11223.1377-27I36.16
amnion, adult pregnant day17.5.CNhs10488.583-22A810.13
aorta, adult.CNhs10498.46-23H118.80
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B21274.18
cerebellum, neonate N30.CNhs11135.1395-42I21395.12
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41418.82
corpus striatum, adult.CNhs10487.19-21D81221.07
corpus striatum, neonate N00.CNhs11226.630-43F1192.38
cortex, adult.CNhs10473.12-14D5953.25
cortex, neonate N30.CNhs11107.1392-42F21035.14
diencephalon, adult.CNhs10482.20-12F21446.00
diencephalon, neonate N30.CNhs11201.1388-42B21410.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G459.98
eyeball, embryo E12.CNhs11016.345-16C645.02
eyeball, embryo E14.CNhs10521.399-16E2106.21
eyeball, embryo E15.CNhs10593.426-16C9116.32
eyeball, embryo E17.CNhs11023.1261-18D4101.12
eyeball, neonate N00.CNhs11207.633-15C6138.59
eyeball, neonate N01.CNhs11140.1532-43E7121.20
eyeball, neonate N02.CNhs11205.1551-44G8108.23
eyeball, neonate N16.CNhs11188.777-19A2268.79
forelimb, embryo E11.CNhs10596.335-25E28.41
forelimb, embryo E12.CNhs10600.359-14H214.18
forelimb, embryo E13.CNhs10589.384-1E212.32
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B57.82
gonad, embryo E13.CNhs11044.1564-45I68.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F515.24
heart, embryo E13.CNhs11013.376-3I99.36
heart, embryo E14.CNhs10597.403-26D49.71
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I29.87
heart, neonate N10.CNhs11118.749-24G120.69
heart, neonate N16.CNhs11209.782-15G112.65
heart, neonate N20.CNhs11127.821-26I610.53
heart, neonate N25.CNhs11196.1351-25D313.83
heart, neonate N30.CNhs11202.1390-42D27.11
hippocampus, adult.CNhs10478.13-16E8852.52
hippocampus, neonate N00.CNhs11228.627-43G1398.65
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I523.46
intestine, embryo E13.CNhs11010.381-16D527.64
intestine, embryo E15.CNhs10602.976-16D824.10
intestine, embryo E16.CNhs10585.463-22H419.97
intestine, embryo E17.CNhs10582.482-18D314.90
intestine, embryo E18.CNhs10526.1289-20F719.21
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E917.79
intestine, neonate N06.CNhs11102.688-20B816.09
intestine, neonate N07.CNhs11095.720-20F215.32
intestine, neonate N10.CNhs11098.755-23A518.33
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E36.92
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I922.38
kidney, embryo E15.CNhs10997.434-16F817.25
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I214.46
kidney, embryo E18.CNhs11001.1288-20C716.10
kidney, neonate N00.CNhs11214.646-21G711.43
kidney, neonate N10.CNhs11206.758-6D519.79
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B139.17
lung, embryo E12.CNhs10522.354-16G221.79
lung, embryo E14.CNhs10604.404-26F819.39
lung, embryo E15.CNhs11020.432-17C514.26
lung, embryo E16.CNhs10998.458-17B69.39
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I611.43
lung, neonate N00.CNhs11224.640-42C612.49
lung, neonate N06.CNhs11212.683-20E531.37
lung, neonate N07.CNhs11111.715-19A338.76
lung, neonate N10.CNhs11219.750-23E647.84
lung, neonate N20.CNhs11109.822-18A453.09
lung, neonate N25.CNhs11119.1359-25C739.54
lung, neonate N30.CNhs11133.1394-42H219.96
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C22138.21
medulla oblongata, neonate N30.CNhs11200.1396-42A32217.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E168.15
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E271.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3112.67
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D733.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D840.77
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D942.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D464.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D579.79
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D694.87
olfactory brain, adult.CNhs10489.18-22I9535.96
ovary, adult.CNhs10507.91-2I73.83
ovary, embryo E18.CNhs11040.505-44H717.27
ovary, neonate N00.CNhs11217.1299-22I410.91
oviduct, adult pregnant day01.CNhs10500.988-6G620.62
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F417.97
pancreas, embryo E15.CNhs11042.1556-45F210.28
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G850.39
pituitary gland, embryo E12.CNhs11018.346-16E648.08
pituitary gland, embryo E13.CNhs11009.370-44C754.59
pituitary gland, embryo E14.CNhs11037.398-44A545.23
pituitary gland, embryo E15.CNhs10592.427-16B940.43
pituitary gland, embryo E16.CNhs11036.449-43F694.89
pituitary gland, embryo E17.CNhs11039.1265-44F5103.99
pituitary gland, neonate N00.CNhs11190.1308-22E9172.02
placenta, adult pregnant day10.CNhs10472.539-13I773.92
placenta, adult pregnant day17.CNhs10464.577-18G352.96
prostate, adult.CNhs10470.859-1F819.19
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H37.54
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C92286.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E331.63
stomach, embryo E15.CNhs10603.1252-16G823.59
stomach, embryo E16.CNhs11022.459-17D414.36
stomach, embryo E17.CNhs11006.1035-18D512.75
stomach, embryo E18.CNhs10999.1286-20C612.23
stomach, neonate N03.CNhs11193.1340-24B815.24
stomach, neonate N07.CNhs11210.718-18A922.07
stomach, neonate N25.CNhs11104.1355-25E412.56
stomach, neonate N30.CNhs11134.1386-42I112.44
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B74.22
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I411.76
thymus, embryo E15.CNhs11005.430-45I26.78
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E416.81
uterus, adult pregnant day19.CNhs10497.590-15F597.78
uterus, adult.CNhs10509.92-27E510.26
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11221.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21007.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31113.71
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7552.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4807.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5777.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6795.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7763.74
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8768.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9802.01
whole body, embryo E11.CNhs11014.324-5I854.80
whole body, embryo E12.CNhs10587.857-27C9100.95
whole body, embryo E13.CNhs10512.372-23H274.95
whole body, embryo E14.5.CNhs10578.420-27D241.33
whole body, embryo E14.CNhs10519.395-14B165.61
whole body, embryo E16.CNhs10514.453-14F247.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G570.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G564.90
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G579.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G560.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G578.33
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G567.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G547.85
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G556.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G549.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G550.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G555.28
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G553.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G544.51
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G558.73
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G551.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G541.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G545.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G555.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G553.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G554.66
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G557.26
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G551.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G555.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G578.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G559.79
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G555.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G545.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G548.19
whole body, embryo E17.5.CNhs10513.490-9F939.93
whole body, embryo E17.CNhs10517.475-3I5190.61
whole body, embryo E18.CNhs10516.493-3B351.70
whole body, neonate N00.CNhs10525.657-19C258.66
whole body, neonate N01.CNhs10576.659-23C630.61
whole body, neonate N06.CNhs10515.692-21D150.52
whole body, neonate N10.CNhs10518.761-6B458.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.90e-1533
neuronal stem cell7.90e-1533
neuroblast7.90e-1533
electrically signaling cell7.90e-1533
ectodermal cell5.43e-1444
neurectodermal cell5.43e-1444
neural cell7.06e-1443
electrically responsive cell9.97e-1439
electrically active cell9.97e-1439
CNS neuron (sensu Vertebrata)5.95e-1323
neuroblast (sensu Vertebrata)5.95e-1323

Uber anatomy
Ontology termp-valuen
nervous system3.80e-3275
central nervous system4.07e-3273
ectoderm-derived structure5.80e-3195
ectoderm5.80e-3195
presumptive ectoderm5.80e-3195
neurectoderm1.52e-2964
neural plate1.52e-2964
presumptive neural plate1.52e-2964
regional part of nervous system5.45e-2654
ecto-epithelium1.46e-2573
neural tube1.31e-2452
neural rod1.31e-2452
future spinal cord1.31e-2452
neural keel1.31e-2452
structure with developmental contribution from neural crest6.58e-2492
pre-chordal neural plate4.65e-2249
brain1.28e-2147
future brain1.28e-2147
regional part of brain5.08e-2146
anterior neural tube1.30e-1840
regional part of forebrain6.76e-1839
forebrain6.76e-1839
future forebrain6.76e-1839
gray matter2.09e-1734
brain grey matter8.52e-1529
regional part of telencephalon8.52e-1529
telencephalon8.52e-1529
cerebral cortex2.51e-1021
cerebral hemisphere2.51e-1021
pallium2.51e-1021
tube3.80e-09114
regional part of cerebral cortex1.64e-0817
anatomical conduit1.78e-08122
occipital lobe3.23e-0710
visual cortex3.23e-0710
neocortex3.23e-0710
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