FFCP PHASE1:Mm9::chr4:148892325..148892386,+: Difference between revisions
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{{FFCP|EntrezGene=67087|HGNC=|UniProt=Q9JJN6,B1AS20|association_with_transcript=0bp_to_ENSMUST00000030839,NM_023465,uc008vwm.2_5end|description=CAGE_peak_1_at_Ctnnbip1_5end|id=chr4:148892325..148892386,+|ontology_enrichment_celltype=CL:0000117!5.75e-13!23;CL:0000337!5.75e-13!23;CL:0000221!2.40e-11!44;CL:0000133!2.40e-11!44;CL:0002319!8.29e-11!43;CL:0000055!3.15e-08!50;CL:0000540!5.27e-08!33;CL:0000047!5.27e-08!33;CL:0000031!5.27e-08!33;CL:0000404!5.27e-08!33;CL:0002321!9.32e-08!70;CL:0000220!9.32e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,5.75e-13,23;CL:0000337,5.75e-13,23;CL:0000221,2.40e-11,44;CL:0000133,2.40e-11,44;CL:0002319,8.28e-11,43;CL:0000540,5.27e-08,33;CL:0000047,5.27e-08,33;CL:0000031,5.27e-08,33;CL:0000404,5.27e-08,33;CL:0002321,9.31e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.19e-14!73;UBERON:0005743!5.19e-14!73;UBERON:0000073!6.94e-13!75;UBERON:0001016!6.94e-13!75;UBERON:0002020!1.14e-12!34;UBERON:0001049!2.50e-12!52;UBERON:0005068!2.50e-12!52;UBERON:0006241!2.50e-12!52;UBERON:0007135!2.50e-12!52;UBERON:0004121!4.20e-12!102;UBERON:0000924!4.20e-12!102;UBERON:0006601!4.20e-12!102;UBERON:0000033!1.31e-11!63;UBERON:0000955!5.43e-11!50;UBERON:0006238!5.43e-11!50;UBERON:0002616!7.49e-11!49;UBERON:0002780!5.74e-10!39;UBERON:0001890!5.74e-10!39;UBERON:0006240!5.74e-10!39;UBERON:0002346!8.07e-10!71;UBERON:0003075!8.07e-10!71;UBERON:0007284!8.07e-10!71;UBERON:0003056!9.26e-10!49;UBERON:0002791!9.81e-10!29;UBERON:0003528!9.81e-10!29;UBERON:0001893!9.81e-10!29;UBERON:0003080!1.21e-09!40;UBERON:0000956!4.21e-07!21;UBERON:0001869!4.21e-07!21;UBERON:0000203!4.21e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.19e-14,73;UBERON:0000073,1.24e-13,54;UBERON:0004121,1.74e-13,95;UBERON:0000924,1.74e-13,95;UBERON:0006601,1.74e-13,95;UBERON:0010371,5.98e-13,73;UBERON:0001016,6.94e-13,75;UBERON:0002020,1.14e-12,34;UBERON:0001049,2.50e-12,52;UBERON:0005068,2.50e-12,52;UBERON:0006241,2.50e-12,52;UBERON:0007135,2.50e-12,52;UBERON:0010314,1.66e-11,92;UBERON:0002346,1.92e-11,64;UBERON:0003075,1.92e-11,64;UBERON:0007284,1.92e-11,64;UBERON:0002780,5.74e-10,39;UBERON:0001890,5.74e-10,39;UBERON:0006240,5.74e-10,39;UBERON:0000955,6.27e-10,47;UBERON:0006238,6.27e-10,47;UBERON:0002616,8.59e-10,46;UBERON:0003056,9.26e-10,49;UBERON:0003528,9.81e-10,29;UBERON:0002791,9.81e-10,29;UBERON:0001893,9.81e-10,29;UBERON:0003080,1.20e-09,40;UBERON:0000956,4.20e-07,21;UBERON:0001869,4.20e-07,21;UBERON:0000203,4.20e-07,21|phase1_expression=37.4748302225218,15.0059425284925,13.6499771816861,24.8020653271601,26.5474736871564,12.0873075776561,11.9142446703718,1.42035655785734,0.703943610758334,1.63845168425395,0,0.319088635981346,0.342401459862411,0.34968160967599,1.66554880907831,1.01237633694913,0.699561878128147,1.10411757875383,0.959801035240171,0.42438965179803,8.92954546586233,4.96454756004426,3.91799683708403,12.1594241322989,12.3881011776272,16.6527269593356,15.0766698655676,12.9282739611533,17.1021077510736,21.674591159354,13.3038306393183,0.635030673459631,0,0,13.8648777480612,15.9585259544153,14.2918549383658,41.4346314429539,29.6907430919044,21.4644735029257,27.0586484494267,35.5183652178392,34.4712350652119,8.3091899863881,6.18399280439039,10.8292583775392,25.8189143634853,61.7011192556664,67.2239719167484,43.3578674935652,23.0977595681848,51.7509231713898,1.8456086666351,0.725362142011344,1.34437519656986,12.8629718017974,10.0286703978565,17.0171790451556,30.3474691289397,29.6234948392338,46.2696924559511,28.4629406938071,32.9039074561122,31.9464399634897,17.7995945262055,31.9716051725745,54.5272201143497,78.7647525909187,40.3352591879978,38.4766924245318,33.4416688548697,43.9902515981858,47.2658677636453,33.8074605833273,27.5076501822338,46.8801581171111,20.9220173898839,35.7524546638526,23.8090126547177,34.8179799607712,40.7120014030723,32.8175423450759,30.7101298901519,20.8222165711722,26.586895113165,40.3641162098925,37.4437520501641,35.2294952609818,7.72407171998477,7.40601289046498,7.24661221754194,14.6272059086836,9.51959867190851,17.2705021324101,12.3457519315057,12.9927797258227,9.26933172869562,18.4064748384302,15.846946280775,27.2071472372962,37.6051930803737,35.931413676009,33.1246811618639,42.6640021891999,14.7213907887626,11.9079136773296,13.1436355703844,8.33542321949138,3.10725460376606,10.984718290797,13.7053408145247,10.6562917409249,13.1450833435953,13.1128697280782,13.0523464920632,16.9649898295062,7.91023896749996,9.25435884287435,4.42305275974937,26.3679965414277,15.4589062922275,6.78825354389311,9.31958806090611,7.02673912827713,13.823482649688,17.3710797541842,5.51149572727233,8.39863823390771,3.55796635804581,13.1815762676244,12.8100168789215,33.2984033099091,16.1656617778817,19.6900902144355,18.7009240103604,19.6311928311987,17.8218886738054,12.067476149179,25.0195530849338,5.26104639716185,15.2240918266363,21.380895712313,15.6654052930654,19.7423311364787,22.2479352224842,23.3166970918427,26.5175880504033,12.1590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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67087 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJN6,B1AS20 | |||
|association_with_transcript=0bp_to_ENSMUST00000030839,NM_023465,uc008vwm.2_5end | |||
|cluster_id=chr4:148892325..148892386,+ | |||
|description=CAGE_peak_1_at_Ctnnbip1_5end | |||
|id=chr4:148892325..148892386,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.75e-13!23;CL:0000337!5.75e-13!23;CL:0000221!2.40e-11!44;CL:0000133!2.40e-11!44;CL:0002319!8.29e-11!43;CL:0000055!3.15e-08!50;CL:0000540!5.27e-08!33;CL:0000047!5.27e-08!33;CL:0000031!5.27e-08!33;CL:0000404!5.27e-08!33;CL:0002321!9.32e-08!70;CL:0000220!9.32e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.75e-13,23;CL:0000337,5.75e-13,23;CL:0000221,2.40e-11,44;CL:0000133,2.40e-11,44;CL:0002319,8.28e-11,43;CL:0000540,5.27e-08,33;CL:0000047,5.27e-08,33;CL:0000031,5.27e-08,33;CL:0000404,5.27e-08,33;CL:0002321,9.31e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.19e-14!73;UBERON:0005743!5.19e-14!73;UBERON:0000073!6.94e-13!75;UBERON:0001016!6.94e-13!75;UBERON:0002020!1.14e-12!34;UBERON:0001049!2.50e-12!52;UBERON:0005068!2.50e-12!52;UBERON:0006241!2.50e-12!52;UBERON:0007135!2.50e-12!52;UBERON:0004121!4.20e-12!102;UBERON:0000924!4.20e-12!102;UBERON:0006601!4.20e-12!102;UBERON:0000033!1.31e-11!63;UBERON:0000955!5.43e-11!50;UBERON:0006238!5.43e-11!50;UBERON:0002616!7.49e-11!49;UBERON:0002780!5.74e-10!39;UBERON:0001890!5.74e-10!39;UBERON:0006240!5.74e-10!39;UBERON:0002346!8.07e-10!71;UBERON:0003075!8.07e-10!71;UBERON:0007284!8.07e-10!71;UBERON:0003056!9.26e-10!49;UBERON:0002791!9.81e-10!29;UBERON:0003528!9.81e-10!29;UBERON:0001893!9.81e-10!29;UBERON:0003080!1.21e-09!40;UBERON:0000956!4.21e-07!21;UBERON:0001869!4.21e-07!21;UBERON:0000203!4.21e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.19e-14,73;UBERON:0000073,1.24e-13,54;UBERON:0004121,1.74e-13,95;UBERON:0000924,1.74e-13,95;UBERON:0006601,1.74e-13,95;UBERON:0010371,5.98e-13,73;UBERON:0001016,6.94e-13,75;UBERON:0002020,1.14e-12,34;UBERON:0001049,2.50e-12,52;UBERON:0005068,2.50e-12,52;UBERON:0006241,2.50e-12,52;UBERON:0007135,2.50e-12,52;UBERON:0010314,1.66e-11,92;UBERON:0002346,1.92e-11,64;UBERON:0003075,1.92e-11,64;UBERON:0007284,1.92e-11,64;UBERON:0002780,5.74e-10,39;UBERON:0001890,5.74e-10,39;UBERON:0006240,5.74e-10,39;UBERON:0000955,6.27e-10,47;UBERON:0006238,6.27e-10,47;UBERON:0002616,8.59e-10,46;UBERON:0003056,9.26e-10,49;UBERON:0003528,9.81e-10,29;UBERON:0002791,9.81e-10,29;UBERON:0001893,9.81e-10,29;UBERON:0003080,1.20e-09,40;UBERON:0000956,4.20e-07,21;UBERON:0001869,4.20e-07,21;UBERON:0000203,4.20e-07,21 | |||
|phase1_expression=37.4748302225218,15.0059425284925,13.6499771816861,24.8020653271601,26.5474736871564,12.0873075776561,11.9142446703718,1.42035655785734,0.703943610758334,1.63845168425395,0,0.319088635981346,0.342401459862411,0.34968160967599,1.66554880907831,1.01237633694913,0.699561878128147,1.10411757875383,0.959801035240171,0.42438965179803,8.92954546586233,4.96454756004426,3.91799683708403,12.1594241322989,12.3881011776272,16.6527269593356,15.0766698655676,12.9282739611533,17.1021077510736,21.674591159354,13.3038306393183,0.635030673459631,0,0,13.8648777480612,15.9585259544153,14.2918549383658,41.4346314429539,29.6907430919044,21.4644735029257,27.0586484494267,35.5183652178392,34.4712350652119,8.3091899863881,6.18399280439039,10.8292583775392,25.8189143634853,61.7011192556664,67.2239719167484,43.3578674935652,23.0977595681848,51.7509231713898,1.8456086666351,0.725362142011344,1.34437519656986,12.8629718017974,10.0286703978565,17.0171790451556,30.3474691289397,29.6234948392338,46.2696924559511,28.4629406938071,32.9039074561122,31.9464399634897,17.7995945262055,31.9716051725745,54.5272201143497,78.7647525909187,40.3352591879978,38.4766924245318,33.4416688548697,43.9902515981858,47.2658677636453,33.8074605833273,27.5076501822338,46.8801581171111,20.9220173898839,35.7524546638526,23.8090126547177,34.8179799607712,40.7120014030723,32.8175423450759,30.7101298901519,20.8222165711722,26.586895113165,40.3641162098925,37.4437520501641,35.2294952609818,7.72407171998477,7.40601289046498,7.24661221754194,14.6272059086836,9.51959867190851,17.2705021324101,12.3457519315057,12.9927797258227,9.26933172869562,18.4064748384302,15.846946280775,27.2071472372962,37.6051930803737,35.931413676009,33.1246811618639,42.6640021891999,14.7213907887626,11.9079136773296,13.1436355703844,8.33542321949138,3.10725460376606,10.984718290797,13.7053408145247,10.6562917409249,13.1450833435953,13.1128697280782,13.0523464920632,16.9649898295062,7.91023896749996,9.25435884287435,4.42305275974937,26.3679965414277,15.4589062922275,6.78825354389311,9.31958806090611,7.02673912827713,13.823482649688,17.3710797541842,5.51149572727233,8.39863823390771,3.55796635804581,13.1815762676244,12.8100168789215,33.2984033099091,16.1656617778817,19.6900902144355,18.7009240103604,19.6311928311987,17.8218886738054,12.067476149179,25.0195530849338,5.26104639716185,15.2240918266363,21.380895712313,15.6654052930654,19.7423311364787,22.2479352224842,23.3166970918427,26.5175880504033,12.1590584247337,25.6525911590082,19.6670323374532,17.4191612922309,16.6588756644957,12.2340789659263,16.3678518265418,12.3469281844766,13.1362616100206,2.1066395619397,4.11756651383544,4.26245249093389,12.4275463521301,11.9608290590359,14.0448407939592,15.3884078130387,15.1508458445501,15.7352455145126,14.1845706297749,15.5598572811779,26.2722020326131,23.6966183875412,32.3409904235818,31.0493540560627,25.0001978497318,18.2226595691572,24.6939810519084,13.24826675954,43.425746424058,19.1642894130603,16.9248362664668,11.9441420299731,13.0052536241846,12.5001437482431,11.4959609035305,12.6755484991576,13.6962450801043,26.5736274464927,16.3051965176771,17.8447998248191,15.3196483471686,15.0122347081723,16.178749355776,22.2622191370935,22.5029638777435,19.7254616991205,15.6520462275328,24.7957018480777,13.2373363099454,12.9948166402309,18.1651773515925,17.3900477091708,12.1040321343274,18.839847340965,14.4374681788507,10.6722945751374,3.67059232575407,4.32429789249047,3.82265591054251,2.02860121388503,5.54707467430559,9.93040821947537,12.083237772934,5.5125977103512,7.68771956926628,4.31304619582064,10.0478055870496,14.0416952901552,7.32478746046624,9.86685774370517,11.5786445127208,3.32555742299888,16.6752442358027,15.8076027148765,13.5796068620151,14.0814148973101,13.5680068527871,11.4260947625287,13.0739544064725,15.6058792665129,17.4957104822532,14.8292934851463,8.35702905050264,9.49767400262426,10.9933284521949,3.01582567878545,13.5976420954677,11.8023425524569,12.417153583713,13.9679013289379,24.6144541843627,10.0000316679772,28.7816857012985,14.1978698737316,7.41833614163613,12.7099804662351,10.5146271099123,12.4767257486141,11.0399847007645,13.3587531552715,11.9824901743638,9.09161889277004,18.6366363524648,6.95506417520516,20.8336756290689,18.0804524882469,6.43383479592888,2.65490276679926,12.867373716214,12.6975893925195,10.1846743068185,10.9261700365886,11.0676653259814,12.1461297789064,14.5413491791002,15.329387270543,7.9009189483954,8.4334886859999,8.25084345985495,11.9153862013826,16.7456817449118,22.7671283457648,20.5763553630329,17.5566831305851,15.6964559489822,19.2522354104482,16.745572201303,30.7419937563461,29.8683219917986,3.30792597082443,16.3237390412065,25.1884505645613,24.4870475208313,21.3676495765614,20.0251897688975,20.6951394007194,14.6485988588303,2.73393409276564,15.4790150972417,8.51894825900674,2.82552685507037,3.00727300986255,2.97411625168479,5.09935289981566,6.71766971153558,6.49539876880792,18.1387417422872,16.7658076598002,14.4356821660063,13.82468362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| |||
|short_description=p1@Ctnnbip1 | |||
}} |
Latest revision as of 17:41, 26 September 2015
Short description: | p1@Ctnnbip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ctnnbip1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000030839, NM_023465, uc008vwm.2_5end |
EntrezGene: | Ctnnbip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.75e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.75e-13 | 23 |
ectodermal cell | 2.40e-11 | 44 |
neurectodermal cell | 2.40e-11 | 44 |
neural cell | 8.28e-11 | 43 |
neuron | 5.27e-08 | 33 |
neuronal stem cell | 5.27e-08 | 33 |
neuroblast | 5.27e-08 | 33 |
electrically signaling cell | 5.27e-08 | 33 |
embryonic cell | 9.31e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.19e-14 | 73 |
regional part of nervous system | 1.24e-13 | 54 |
ectoderm-derived structure | 1.74e-13 | 95 |
ectoderm | 1.74e-13 | 95 |
presumptive ectoderm | 1.74e-13 | 95 |
ecto-epithelium | 5.98e-13 | 73 |
nervous system | 6.94e-13 | 75 |
gray matter | 1.14e-12 | 34 |
neural tube | 2.50e-12 | 52 |
neural rod | 2.50e-12 | 52 |
future spinal cord | 2.50e-12 | 52 |
neural keel | 2.50e-12 | 52 |
structure with developmental contribution from neural crest | 1.66e-11 | 92 |
neurectoderm | 1.92e-11 | 64 |
neural plate | 1.92e-11 | 64 |
presumptive neural plate | 1.92e-11 | 64 |
regional part of forebrain | 5.74e-10 | 39 |
forebrain | 5.74e-10 | 39 |
future forebrain | 5.74e-10 | 39 |
brain | 6.27e-10 | 47 |
future brain | 6.27e-10 | 47 |
regional part of brain | 8.59e-10 | 46 |
pre-chordal neural plate | 9.26e-10 | 49 |
brain grey matter | 9.81e-10 | 29 |
regional part of telencephalon | 9.81e-10 | 29 |
telencephalon | 9.81e-10 | 29 |
anterior neural tube | 1.20e-09 | 40 |
cerebral cortex | 4.20e-07 | 21 |
cerebral hemisphere | 4.20e-07 | 21 |
pallium | 4.20e-07 | 21 |