FFCP PHASE1:Mm9::chr9:44946397..44946404,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=399548 | |EntrezGene=399548 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=90 | |MCL_coexpression_id=90 | ||
|TSSclassifier=NA | |||
|UniProt=Q7M729 | |UniProt=Q7M729 | ||
|association_with_transcript=-115bp_to_ENSMUST00000060125_5end | |association_with_transcript=-115bp_to_ENSMUST00000060125_5end | ||
|cluster_id=chr9:44946397..44946404,+ | |||
|description=CAGE_peak_17_at_Scn4b_5end | |description=CAGE_peak_17_at_Scn4b_5end | ||
|id=chr9:44946397..44946404,+ | |id=chr9:44946397..44946404,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.03e-15!86;UBERON:0000153!3.30e-13!94;UBERON:0001049!3.85e-12!52;UBERON:0005068!3.85e-12!52;UBERON:0006241!3.85e-12!52;UBERON:0007135!3.85e-12!52;UBERON:0000063!3.13e-11!35;UBERON:0003076!8.63e-11!12;UBERON:0003057!8.63e-11!12;UBERON:0002616!2.95e-10!49;UBERON:0000955!5.81e-10!50;UBERON:0006238!5.81e-10!50;UBERON:0000073!8.34e-10!75;UBERON:0001016!8.34e-10!75;UBERON:0006562!2.62e-09!24;UBERON:0001557!2.62e-09!24;UBERON:0001042!2.62e-09!24;UBERON:0008814!2.62e-09!24;UBERON:0009145!2.62e-09!24;UBERON:0001017!2.90e-09!73;UBERON:0005743!2.90e-09!73;UBERON:0000064!5.39e-09!99;UBERON:0002298!5.79e-09!6;UBERON:0002370!3.68e-08!23;UBERON:0000974!3.68e-08!23;UBERON:0004807!3.68e-08!23;UBERON:0005058!3.68e-08!23;UBERON:0003351!3.68e-08!23;UBERON:0009113!3.68e-08!23;UBERON:0003295!3.68e-08!23;UBERON:0009722!3.68e-08!23;UBERON:0005562!3.68e-08!23;UBERON:0007690!3.68e-08!23;UBERON:0000072!5.40e-08!27;UBERON:0000033!5.74e-08!63;UBERON:0003408!9.95e-08!24;UBERON:0002346!1.44e-07!71;UBERON:0003075!1.44e-07!71;UBERON:0007284!1.44e-07!71;UBERON:0004121!3.29e-07!102;UBERON:0000924!3.29e-07!102;UBERON:0006601!3.29e-07!102;UBERON:0000475!8.76e-07!200 | |ontology_enrichment_uberon=UBERON:0007811!4.03e-15!86;UBERON:0000153!3.30e-13!94;UBERON:0001049!3.85e-12!52;UBERON:0005068!3.85e-12!52;UBERON:0006241!3.85e-12!52;UBERON:0007135!3.85e-12!52;UBERON:0000063!3.13e-11!35;UBERON:0003076!8.63e-11!12;UBERON:0003057!8.63e-11!12;UBERON:0002616!2.95e-10!49;UBERON:0000955!5.81e-10!50;UBERON:0006238!5.81e-10!50;UBERON:0000073!8.34e-10!75;UBERON:0001016!8.34e-10!75;UBERON:0006562!2.62e-09!24;UBERON:0001557!2.62e-09!24;UBERON:0001042!2.62e-09!24;UBERON:0008814!2.62e-09!24;UBERON:0009145!2.62e-09!24;UBERON:0001017!2.90e-09!73;UBERON:0005743!2.90e-09!73;UBERON:0000064!5.39e-09!99;UBERON:0002298!5.79e-09!6;UBERON:0002370!3.68e-08!23;UBERON:0000974!3.68e-08!23;UBERON:0004807!3.68e-08!23;UBERON:0005058!3.68e-08!23;UBERON:0003351!3.68e-08!23;UBERON:0009113!3.68e-08!23;UBERON:0003295!3.68e-08!23;UBERON:0009722!3.68e-08!23;UBERON:0005562!3.68e-08!23;UBERON:0007690!3.68e-08!23;UBERON:0000072!5.40e-08!27;UBERON:0000033!5.74e-08!63;UBERON:0003408!9.95e-08!24;UBERON:0002346!1.44e-07!71;UBERON:0003075!1.44e-07!71;UBERON:0007284!1.44e-07!71;UBERON:0004121!3.29e-07!102;UBERON:0000924!3.29e-07!102;UBERON:0006601!3.29e-07!102;UBERON:0000475!8.76e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,6.50e-14,1;UBERON:0005889,6.50e-14,1;UBERON:0001896,2.03e-07,2;UBERON:0002298,2.03e-07,2;UBERON:0005290,2.03e-07,2;UBERON:0010096,2.03e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0,0,0,0,0,1.0214987046815,0.307213066512487,0,0,0,0.837548997004143,0,0.45839474333043,0.883885756421003,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.149790639404823,14.640019290196,0,1.56441888173049,2.55715457330331,0.83115217823824,6.48965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.17211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.240390899039938,0.590758108698309,0.201932899896295,0.381034033274999,0.201652370273681,0.292373642219257,0.0962118416403295,0.701261413089414,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0,0,0,0,0,1.0214987046815,0.307213066512487,0,0,0,0.837548997004143,0,0.45839474333043,0.883885756421003,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0.149790639404823,14.640019290196,0,1.56441888173049,2.55715457330331,0.83115217823824,6.48965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.17211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.240390899039938,0.590758108698309,0.201932899896295,0.381034033274999,0.201652370273681,0.292373642219257,0.0962118416403295,0.701261413089414,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p17@Scn4b | |short_description=p17@Scn4b | ||
}} | }} |
Latest revision as of 17:32, 26 September 2015
Short description: | p17@Scn4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Scn4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -115bp_to_ENSMUST00000060125_5end |
EntrezGene: | Scn4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortex | 6.50e-14 | 1 |
zygote cortex | 6.50e-14 | 1 |
medulla oblongata | 2.03e-07 | 2 |
brainstem | 2.03e-07 | 2 |
myelencephalon | 2.03e-07 | 2 |
future myelencephalon | 2.03e-07 | 2 |