FFCP PHASE1:Mm9::chr2:4322585..4322602,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:4322585..4322602,+
|short_description=p21@Frmd4a
|description=CAGE_peak_21_at_Frmd4a_5end
|association_with_transcript=68bp_to_ENSMUST00000115039_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=209630 | |EntrezGene=209630 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3352 | |||
|TSSclassifier=NA | |||
|UniProt=B1AXK0 | |UniProt=B1AXK0 | ||
|association_with_transcript=68bp_to_ENSMUST00000115039_5end | |||
|cluster_id=chr2:4322585..4322602,+ | |||
|description=CAGE_peak_21_at_Frmd4a_5end | |||
|id=chr2:4322585..4322602,+ | |||
|ontology_enrichment_celltype=CL:0000393!9.01e-08!39;CL:0000211!9.01e-08!39;CL:0000107!1.78e-07!9;CL:0000540!9.97e-07!33;CL:0000047!9.97e-07!33;CL:0000031!9.97e-07!33;CL:0000404!9.97e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,6.61e-19,9;CL:0000393,1.13e-11,39;CL:0000211,1.13e-11,39;CL:0000540,1.57e-09,33;CL:0000047,1.57e-09,33;CL:0000031,1.57e-09,33;CL:0000404,1.57e-09,33;CL:0002319,3.98e-09,43;CL:0000221,7.90e-09,44;CL:0000133,7.90e-09,44;CL:0000215,1.75e-07,3;CL:0002321,2.51e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!6.25e-09!11;UBERON:0002410!1.78e-07!9;UBERON:0000073!8.03e-07!75;UBERON:0001016!8.03e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.63e-23,11;UBERON:0002410,6.61e-19,9;UBERON:0010708,1.83e-11,8;UBERON:0002102,3.63e-10,7;UBERON:0004710,3.63e-10,7;UBERON:0005419,3.63e-10,7;UBERON:0005417,3.63e-10,7;UBERON:0005729,3.63e-10,7;UBERON:0000013,1.83e-07,3;UBERON:0000011,2.22e-07,3;UBERON:0010313,3.09e-07,3;UBERON:0002342,3.09e-07,3;UBERON:0002005,3.09e-07,3;UBERON:0005428,3.09e-07,3;UBERON:0005062,3.09e-07,3 | |||
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| ||
|short_description=p21@Frmd4a | |||
}} | }} |
Latest revision as of 17:12, 26 September 2015
Short description: | p21@Frmd4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_Frmd4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:3352 |
Association with transcript: | 68bp_to_ENSMUST00000115039_5end |
EntrezGene: | Frmd4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 6.61e-19 | 9 |
electrically responsive cell | 1.13e-11 | 39 |
electrically active cell | 1.13e-11 | 39 |
neuron | 1.57e-09 | 33 |
neuronal stem cell | 1.57e-09 | 33 |
neuroblast | 1.57e-09 | 33 |
electrically signaling cell | 1.57e-09 | 33 |
neural cell | 3.98e-09 | 43 |
ectodermal cell | 7.90e-09 | 44 |
neurectodermal cell | 7.90e-09 | 44 |
barrier cell | 1.75e-07 | 3 |
embryonic cell | 2.51e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 3.63e-23 | 11 |
autonomic nervous system | 6.61e-19 | 9 |
pectoral complex | 1.83e-11 | 8 |
forelimb | 3.63e-10 | 7 |
pectoral appendage | 3.63e-10 | 7 |
pectoral appendage bud | 3.63e-10 | 7 |
forelimb bud | 3.63e-10 | 7 |
forelimb/pectoral fin field | 3.63e-10 | 7 |
sympathetic nervous system | 1.83e-07 | 3 |
parasympathetic nervous system | 2.22e-07 | 3 |
neural crest-derived structure | 3.09e-07 | 3 |
neural crest | 3.09e-07 | 3 |
enteric nervous system | 3.09e-07 | 3 |
vagal neural crest | 3.09e-07 | 3 |
neural fold | 3.09e-07 | 3 |