Personal tools

FFCP PHASE1:Mm9::chr6:125046150..125046159,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr6:125046150..125046159,+ |short_description=p4@Chd4 |description=CAGE_peak_4_at_Chd4_5end |association_with_transcript=-20bp_to_ENSMUST00000112390_5end |Ent...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:125046150..125046159,+
|DHSsupport=NA
|short_description=p4@Chd4
|DPIdataset=NA
|description=CAGE_peak_4_at_Chd4_5end
|association_with_transcript=-20bp_to_ENSMUST00000112390_5end
|EntrezGene=107932
|EntrezGene=107932
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E9QAS5
|UniProt=E9QAS5
|association_with_transcript=-20bp_to_ENSMUST00000112390_5end
|cluster_id=chr6:125046150..125046159,+
|description=CAGE_peak_4_at_Chd4_5end
|id=chr6:125046150..125046159,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002780!5.53e-09!39;UBERON:0001890!5.53e-09!39;UBERON:0006240!5.53e-09!39;UBERON:0003056!9.84e-09!49;UBERON:0003080!1.54e-08!40;UBERON:0000153!8.64e-08!94;UBERON:0007811!1.04e-07!86;UBERON:0002791!3.05e-07!29;UBERON:0003528!3.05e-07!29;UBERON:0001893!3.05e-07!29;UBERON:0002020!4.05e-07!34;UBERON:0001049!7.03e-07!52;UBERON:0005068!7.03e-07!52;UBERON:0006241!7.03e-07!52;UBERON:0007135!7.03e-07!52;UBERON:0002616!7.61e-07!49;UBERON:0000033!9.73e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0002780,5.58e-09,39;UBERON:0001890,5.58e-09,39;UBERON:0006240,5.58e-09,39;UBERON:0003056,1.06e-08,49;UBERON:0003080,1.56e-08,40;UBERON:0002616,2.14e-07,46;UBERON:0003528,3.21e-07,29;UBERON:0002791,3.21e-07,29;UBERON:0001893,3.21e-07,29;UBERON:0002020,4.21e-07,34;UBERON:0000955,4.23e-07,47;UBERON:0006238,4.23e-07,47;UBERON:0000073,4.80e-07,54;UBERON:0001049,6.46e-07,52;UBERON:0005068,6.46e-07,52;UBERON:0006241,6.46e-07,52;UBERON:0007135,6.46e-07,52
|phase1_expression=2.40223270657191,3.83872948403297,1.81999695755814,2.41971369045464,3.00537437967808,1.34303417529512,1.63528848416868,1.54947988129892,1.267098499365,1.87251621057595,0.68487187290202,0.638177271962691,3.25281386869291,1.48614684112296,2.6648780945253,3.44207954562704,0.699561878128147,2.68142840554502,2.33094537129756,1.69755860719212,3.99703463710028,2.08510997521859,1.04479915655574,1.59992422793407,0.68822784320151,2.8711598205751,3.01533397311352,1.29282739611533,1.52018735565099,2.26827116783938,0.221730510655305,1.90509202037889,1.23012957516914,15.8481681015439,0.577703239502549,0.498703936075477,1.22501613757421,2.92972141515835,0.7813353445238,1.57057123192139,3.52938892818609,5.46436387966757,0.971020706062307,0.503587271902309,0.608261587317087,1.10128051297009,1.56478268869608,1.30815093828268,0.878744730937887,1.1665793944457,0.699932108126813,1.43752564364972,1.51004345451963,2.17608642603403,2.01656279485478,1.02903774414379,1.14613375975503,2.57836046138721,5.05791152148994,4.23192783417626,1.26766280701236,3.04960078862219,0.889294796111139,0.899899717281399,1.97773272513395,0,1.49800055259202,1.15265491596466,5.80661828927475,6.48028503992115,5.67877395648731,1.14260393761521,1.32521124570968,5.26710436624302,5.271500906003,9.19218786610021,0,2.42605942361857,1.68967186581868,5.40733779693795,5.21479568533735,5.2091337055676,1.3959149950069,1.12552522006336,2.13917546887534,2.65165726926301,1.85083185038834,4.65998614563251,1.96888102666279,2.11600368298999,2.6087803983151,0.860423876981386,0,0.539703191637817,0,0,0.842666520790511,1.02258193546835,1.29893002301434,0,1.40843419776681,1.28326477414318,2.54805239706646,0,1.94841936910093,1.01343946190039,0,1.59857431606684,2.07150306917737,1.33597925158342,2.4287945747259,1.52232739156071,1.84492397804847,0.60289056221049,0.940709657085638,0.628332956648377,0.494389935468748,0.86759614151947,0,2.26473589926373,2.65009822152472,0.484875253135222,1.86391761218122,1.46390398505774,2.72280718857492,1.27728527604296,1.67741174308288,1.19980546198682,1.27070227073065,1.19832511523858,1.37250180845588,3.76963056338593,1.91206752211504,4.60287823194595,2.0778804455956,3.24482526135515,1.83310854930569,1.36847667671102,1.76905930903572,1.89397670297827,3.3831315170303,1.14951052216736,3.06105620669094,2.71268672104287,1.83698547708585,2.43416068541215,1.96773621575431,0.776110112217047,2.15567992932842,2.64748512234947,2.46331573829528,1.53437012699302,1.94633074457919,0.696504333044333,1.4404749548556,2.7864797354589,0.702213187313235,0.772043721344145,1.98914449576915,1.03562886267751,0.938104239924385,2.52086886045421,1.65721314909647,1.57411385397923,2.00547246753592,2.55787339225449,1.60964040839772,1.05088808130453,1.15191894939436,0.985004784474571,0.891756905004413,1.02339991197733,0,1.07365135008297,2.52347938276953,3.39585220851639,2.31293148088659,1.32225283331772,2.13288250535234,1.39342003116263,0.902072229254653,1.61346819698674,1.11189021922435,1.33157938278791,0.474529061544512,0.823494773620054,2.01068167040216,0.994782360205754,1.16978452271472,1.79763881730844,1.72910439899755,1.59313018603494,2.0863469104839,2.05647322697512,1.1270773567308,1.4255592949172,0.969762435838129,2.17421041659988,1.07502113111237,1.18088118383682,0.627994911365499,0.863780147452604,0,2.16898637430922,0.982794975566015,1.79889689907883,1.42002084971952,2.65294875727659,1.78238096246994,1.72617682470486,1.78348749452539,1.37280706594041,0,1.48856379067401,0.312037673114561,0.757736633841335,0.538192240565737,0.964887042726734,0.369506380333209,1.32643988239339,1.95557971730431,2.8856664581782,0.704070744865506,1.17254380209271,2.61848004974615,2.73187107000918,0.945810864637146,2.87904096543407,1.75400245523236,1.14704320301017,1.03610989119537,0.723245292907558,3.01582567878545,2.17562273527484,1.47529281905711,0.551873492609465,1.12385412991454,1.40654023910644,1.3114795630134,1.26235463602186,1.26203287766503,1.17131623288992,1.50796378412959,1.43381278771531,1.78238939265915,3.11384183867716,1.21443210502468,2.63030272120181,2.76701444562566,1.28528526568723,0.851640511249612,1.06839362200353,1.95464351224291,1.64970122972535,0,1.69946445308487,3.32555912661226,1.50884063804718,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,0,2.38307724027652,3.42116078659489,2.58717367565509,2.14337035031592,2.30542303734956,2.31879462882692,2.13913726782757,1.8267896946876,0.938686832254841,1.0591603543191,0.882113592219848,2.63818004706368,1.45317984026315,2.23157822234177,1.67121281604391,2.29797259643086,1.1659233465194,0.556275906031529,2.39219233116994,2.06386867963222,2.96311243791539,3.95573759709851,3.41735569302563,1.83022538565218,0.849892149969277,1.39951452323658,1.65839968565309,0.954670618015114,2.37251995185852,1.82987520414164,1.51207477150522,2.09088296014469,1.74690050996942,1.07891477107857,1.32245529160537,2.6175594198403,1.42576470620972,1.24267862617385,12.9649375897364,2.69129782879162,2.31641886639937,3.30567020184881,2.45403664607689,2.53434188236167,1.64300134104056,3.77592716047455,5.97698263226552,8.69702834973622,6.62469014393091,4.4241556887945,0.810900861160657,2.36235201479103,1.94881234466693,2.32734704367726,0.993406773906324,3.00488623799922,2.06765338044408,3.12995994839258,3.27689268616499,3.32726410951574,4.48306251402861,2.98256709085021,3.74006086981021,1.81384306892169,4.43971906748129,3.6782681209885,3.8613461763738,1.35232715822533,2.25218970541418,0.915758121336325,1.92931541171159,2.50786052017682,3.3885110557024,2.76195141904306,2.29158205375759,1.3748254587495,4.7955776383945,3.0215755895588,3.37511250115903,1.80128481289688,4.53142408984205,2.5888015587591,4.77421798887213,1.59609949360412,3.24393850932855,1.94485373654635,1.46729213839588,2.38996560985018,0.666740183404846,0.824140228955577,0.962757628775446,2.02157769411038,1.2673964994512,2.07488975524684,2.52832070168682,1.79270426733634,2.06767688240208,0.476293691283074,2.20180219295225,0.77163688185482,0.412085900803307,1.47198920134397,2.05721551431249,1.77475806159337,0.953744759789284,2.18019624948493,1.97629698872194,2.36920902096694,1.46342378298218,1.31534855718921,1.22223702461276,1.68342681497322,1.89816028998679,0.985044823755635,1.63692417267876,2.32405261778949,1.54325288784913,1.74867404556562,0.233931608445408,3.00819475667618,2.10417165275728,1.54413993383661,1.15933917810211
|phase1_expression=2.40223270657191,3.83872948403297,1.81999695755814,2.41971369045464,3.00537437967808,1.34303417529512,1.63528848416868,1.54947988129892,1.267098499365,1.87251621057595,0.68487187290202,0.638177271962691,3.25281386869291,1.48614684112296,2.6648780945253,3.44207954562704,0.699561878128147,2.68142840554502,2.33094537129756,1.69755860719212,3.99703463710028,2.08510997521859,1.04479915655574,1.59992422793407,0.68822784320151,2.8711598205751,3.01533397311352,1.29282739611533,1.52018735565099,2.26827116783938,0.221730510655305,1.90509202037889,1.23012957516914,15.8481681015439,0.577703239502549,0.498703936075477,1.22501613757421,2.92972141515835,0.7813353445238,1.57057123192139,3.52938892818609,5.46436387966757,0.971020706062307,0.503587271902309,0.608261587317087,1.10128051297009,1.56478268869608,1.30815093828268,0.878744730937887,1.1665793944457,0.699932108126813,1.43752564364972,1.51004345451963,2.17608642603403,2.01656279485478,1.02903774414379,1.14613375975503,2.57836046138721,5.05791152148994,4.23192783417626,1.26766280701236,3.04960078862219,0.889294796111139,0.899899717281399,1.97773272513395,0,1.49800055259202,1.15265491596466,5.80661828927475,6.48028503992115,5.67877395648731,1.14260393761521,1.32521124570968,5.26710436624302,5.271500906003,9.19218786610021,0,2.42605942361857,1.68967186581868,5.40733779693795,5.21479568533735,5.2091337055676,1.3959149950069,1.12552522006336,2.13917546887534,2.65165726926301,1.85083185038834,4.65998614563251,1.96888102666279,2.11600368298999,2.6087803983151,0.860423876981386,0,0.539703191637817,0,0,0.842666520790511,1.02258193546835,1.29893002301434,0,1.40843419776681,1.28326477414318,2.54805239706646,0,1.94841936910093,1.01343946190039,0,1.59857431606684,2.07150306917737,1.33597925158342,2.4287945747259,1.52232739156071,1.84492397804847,0.60289056221049,0.940709657085638,0.628332956648377,0.494389935468748,0.86759614151947,0,2.26473589926373,2.65009822152472,0.484875253135222,1.86391761218122,1.46390398505774,2.72280718857492,1.27728527604296,1.67741174308288,1.19980546198682,1.27070227073065,1.19832511523858,1.37250180845588,3.76963056338593,1.91206752211504,4.60287823194595,2.0778804455956,3.24482526135515,1.83310854930569,1.36847667671102,1.76905930903572,1.89397670297827,3.3831315170303,1.14951052216736,3.06105620669094,2.71268672104287,1.83698547708585,2.43416068541215,1.96773621575431,0.776110112217047,2.15567992932842,2.64748512234947,2.46331573829528,1.53437012699302,1.94633074457919,0.696504333044333,1.4404749548556,2.7864797354589,0.702213187313235,0.772043721344145,1.98914449576915,1.03562886267751,0.938104239924385,2.52086886045421,1.65721314909647,1.57411385397923,2.00547246753592,2.55787339225449,1.60964040839772,1.05088808130453,1.15191894939436,0.985004784474571,0.891756905004413,1.02339991197733,0,1.07365135008297,2.52347938276953,3.39585220851639,2.31293148088659,1.32225283331772,2.13288250535234,1.39342003116263,0.902072229254653,1.61346819698674,1.11189021922435,1.33157938278791,0.474529061544512,0.823494773620054,2.01068167040216,0.994782360205754,1.16978452271472,1.79763881730844,1.72910439899755,1.59313018603494,2.0863469104839,2.05647322697512,1.1270773567308,1.4255592949172,0.969762435838129,2.17421041659988,1.07502113111237,1.18088118383682,0.627994911365499,0.863780147452604,0,2.16898637430922,0.982794975566015,1.79889689907883,1.42002084971952,2.65294875727659,1.78238096246994,1.72617682470486,1.78348749452539,1.37280706594041,0,1.48856379067401,0.312037673114561,0.757736633841335,0.538192240565737,0.964887042726734,0.369506380333209,1.32643988239339,1.95557971730431,2.8856664581782,0.704070744865506,1.17254380209271,2.61848004974615,2.73187107000918,0.945810864637146,2.87904096543407,1.75400245523236,1.14704320301017,1.03610989119537,0.723245292907558,3.01582567878545,2.17562273527484,1.47529281905711,0.551873492609465,1.12385412991454,1.40654023910644,1.3114795630134,1.26235463602186,1.26203287766503,1.17131623288992,1.50796378412959,1.43381278771531,1.78238939265915,3.11384183867716,1.21443210502468,2.63030272120181,2.76701444562566,1.28528526568723,0.851640511249612,1.06839362200353,1.95464351224291,1.64970122972535,0,1.69946445308487,3.32555912661226,1.50884063804718,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,0,2.38307724027652,3.42116078659489,2.58717367565509,2.14337035031592,2.30542303734956,2.31879462882692,2.13913726782757,1.8267896946876,0.938686832254841,1.0591603543191,0.882113592219848,2.63818004706368,1.45317984026315,2.23157822234177,1.67121281604391,2.29797259643086,1.1659233465194,0.556275906031529,2.39219233116994,2.06386867963222,2.96311243791539,3.95573759709851,3.41735569302563,1.83022538565218,0.849892149969277,1.39951452323658,1.65839968565309,0.954670618015114,2.37251995185852,1.82987520414164,1.51207477150522,2.09088296014469,1.74690050996942,1.07891477107857,1.32245529160537,2.6175594198403,1.42576470620972,1.24267862617385,12.9649375897364,2.69129782879162,2.31641886639937,3.30567020184881,2.45403664607689,2.53434188236167,1.64300134104056,3.77592716047455,5.97698263226552,8.69702834973622,6.62469014393091,4.4241556887945,0.810900861160657,2.36235201479103,1.94881234466693,2.32734704367726,0.993406773906324,3.00488623799922,2.06765338044408,3.12995994839258,3.27689268616499,3.32726410951574,4.48306251402861,2.98256709085021,3.74006086981021,1.81384306892169,4.43971906748129,3.6782681209885,3.8613461763738,1.35232715822533,2.25218970541418,0.915758121336325,1.92931541171159,2.50786052017682,3.3885110557024,2.76195141904306,2.29158205375759,1.3748254587495,4.7955776383945,3.0215755895588,3.37511250115903,1.80128481289688,4.53142408984205,2.5888015587591,4.77421798887213,1.59609949360412,3.24393850932855,1.94485373654635,1.46729213839588,2.38996560985018,0.666740183404846,0.824140228955577,0.962757628775446,2.02157769411038,1.2673964994512,2.07488975524684,2.52832070168682,1.79270426733634,2.06767688240208,0.476293691283074,2.20180219295225,0.77163688185482,0.412085900803307,1.47198920134397,2.05721551431249,1.77475806159337,0.953744759789284,2.18019624948493,1.97629698872194,2.36920902096694,1.46342378298218,1.31534855718921,1.22223702461276,1.68342681497322,1.89816028998679,0.985044823755635,1.63692417267876,2.32405261778949,1.54325288784913,1.74867404556562,0.233931608445408,3.00819475667618,2.10417165275728,1.54413993383661,1.15933917810211
|short_description=p4@Chd4
}}
}}

Latest revision as of 16:43, 26 September 2015

Short description:p4@Chd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Chd4_5end
Coexpression cluster:NA
Association with transcript: -20bp_to_ENSMUST00000112390_5end
EntrezGene:Chd4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Chd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.23
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D95.98
testis, neonate N20.CNhs11110.839-18H38.70
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E43.33
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.86
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I84.77
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of forebrain5.58e-0939
forebrain5.58e-0939
future forebrain5.58e-0939
pre-chordal neural plate1.06e-0849
anterior neural tube1.56e-0840
regional part of brain2.14e-0746
brain grey matter3.21e-0729
regional part of telencephalon3.21e-0729
telencephalon3.21e-0729
gray matter4.21e-0734
brain4.23e-0747
future brain4.23e-0747
regional part of nervous system4.80e-0754
neural tube6.46e-0752
neural rod6.46e-0752
future spinal cord6.46e-0752
neural keel6.46e-0752
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:125046150..125046159,%2B&oldid=4263478"