FFCP PHASE1:Mm9::chr17:56125889..56125914,+: Difference between revisions
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{{FFCP|EntrezGene=240121|HGNC=|MCL_coexpression_id=13|UniProt=Q7TPM6|association_with_transcript=-19bp_to_ENSMUST00000011733,NM_183178,uc008dan.1_5end|description=CAGE_peak_1_at_Fsd1_5end|id=chr17:56125889..56125914,+|ontology_enrichment_celltype=CL:0000221!5.16e-20!44;CL:0000133!5.16e-20!44;CL:0002319!9.67e-20!43;CL:0000540!3.90e-18!33;CL:0000047!3.90e-18!33;CL:0000031!3.90e-18!33;CL:0000404!3.90e-18!33;CL:0000055!1.78e-16!50;CL:0000393!2.17e-15!39;CL:0000211!2.17e-15!39;CL:0000117!2.28e-15!23;CL:0000337!2.28e-15!23|ontology_enrichment_celltype_v019_2=CL:0000221,1.64e-22,44;CL:0000133,1.64e-22,44;CL:0002319,3.45e-22,43;CL:0000540,5.14e-21,33;CL:0000047,5.14e-21,33;CL:0000031,5.14e-21,33;CL:0000404,5.14e-21,33;CL:0000117,9.11e-18,23;CL:0000337,9.11e-18,23;CL:0000393,1.03e-16,39;CL:0000211,1.03e-16,39;CL:0002321,2.08e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.53e-38!73;UBERON:0005743!1.53e-38!73;UBERON:0000073!3.36e-38!75;UBERON:0001016!3.36e-38!75;UBERON:0004121!4.41e-31!102;UBERON:0000924!4.41e-31!102;UBERON:0006601!4.41e-31!102;UBERON:0002346!2.10e-30!71;UBERON:0003075!2.10e-30!71;UBERON:0007284!2.10e-30!71;UBERON:0001049!2.56e-28!52;UBERON:0005068!2.56e-28!52;UBERON:0006241!2.56e-28!52;UBERON:0007135!2.56e-28!52;UBERON:0000033!3.41e-26!63;UBERON:0000955!5.76e-26!50;UBERON:0006238!5.76e-26!50;UBERON:0002616!1.64e-25!49;UBERON:0003056!5.10e-23!49;UBERON:0002020!2.86e-21!34;UBERON:0003080!3.92e-21!40;UBERON:0002780!1.44e-20!39;UBERON:0001890!1.44e-20!39;UBERON:0006240!1.44e-20!39;UBERON:0002791!1.76e-17!29;UBERON:0003528!1.76e-17!29;UBERON:0001893!1.76e-17!29;UBERON:0000153!1.42e-13!94;UBERON:0007811!7.20e-13!86;UBERON:0000956!1.93e-12!21;UBERON:0001869!1.93e-12!21;UBERON:0000203!1.93e-12!21;UBERON:0002619!2.40e-10!17;UBERON:0003076!1.30e-07!12;UBERON:0003057!1.30e-07!12;UBERON:0002021!1.31e-07!10;UBERON:0000411!1.31e-07!10;UBERON:0001950!1.31e-07!10;UBERON:0000468!2.82e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.25e-45,73;UBERON:0001016,8.50e-44,75;UBERON:0004121,7.17e-38,95;UBERON:0000924,7.17e-38,95;UBERON:0006601,7.17e-38,95;UBERON:0002346,2.11e-36,64;UBERON:0003075,2.11e-36,64;UBERON:0007284,2.11e-36,64;UBERON:0000073,1.99e-34,54;UBERON:0001049,5.52e-33,52;UBERON:0005068,5.52e-33,52;UBERON:0006241,5.52e-33,52;UBERON:0007135,5.52e-33,52;UBERON:0010371,2.69e-30,73;UBERON:0000955,4.62e-28,47;UBERON:0006238,4.62e-28,47;UBERON:0002616,1.55e-27,46;UBERON:0003056,3.14e-26,49;UBERON:0002020,1.06e-24,34;UBERON:0003080,1.54e-24,40;UBERON:0002780,7.11e-24,39;UBERON:0001890,7.11e-24,39;UBERON:0006240,7.11e-24,39;UBERON:0010314,1.34e-21,92;UBERON:0003528,3.01e-20,29;UBERON:0002791,3.01e-20,29;UBERON:0001893,3.01e-20,29;UBERON:0000956,2.50e-14,21;UBERON:0001869,2.50e-14,21;UBERON:0000203,2.50e-14,21;UBERON:0002619,7.19e-12,17;UBERON:0003076,1.15e-08,12;UBERON:0003057,1.15e-08,12;UBERON:0002021,1.16e-08,10;UBERON:0000411,1.16e-08,10;UBERON:0001950,1.16e-08,10;UBERON:0002420,4.14e-07,8;UBERON:0007245,4.14e-07,8;UBERON:0010009,4.14e-07,8;UBERON:0010011,4.14e-07,8;UBERON:0000454,4.14e-07,8|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.734187008646726,1.56478268869608,4.79655344036982,4.17403747195497,3.11087838518853,2.37976916763116,12.9377307928474,0,0,0,1.28629718017973,0.573066879877513,1.03134418455488,23.0640765379941,26.4495489636016,17.747279298173,3.38844532069132,0.889294796111139,0.899899717281399,0,0.7104801149461,11.9840044207362,12.2949857702897,14.9313041724208,18.4958135514416,18.2982716375702,33.9924671440526,36.8850463389195,15.6788222995141,16.0061936600455,15.6267193723704,13.2139057199266,16.98241596533,20.1224558565679,26.6410301214992,22.1400097517831,21.8783615633839,27.9182999001381,20.2594539611405,16.1966142643419,31.8198872311561,34.0268317109856,25.3503246322409,0.832988126665025,1.36028808192214,0,0,0,0,0,0,0.561777680527007,0,0,0,4.08445917352373,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,2.08182392119363,1.82679286987285,1.38369298353635,1.20578112442098,0.823120949949934,0.251333182659351,0,0,0,0.161766849947409,0,0,1.86391761218122,13.1751358655196,14.2423760633149,0,0,0,0,15.8778077769112,9.15001205637253,25.5078334789115,13.210648334613,20.2015211290961,17.6619837875626,14.4394724130304,1.62942982160506,0.124406970610093,0,0.420883711772948,4.03373373184381,7.58676944630461,4.50155324513373,3.76762044589288,3.74200745332303,4.35586648968489,3.5606655332697,4.13925393182425,4.095791865724,4.72765200419548,4.39877810409872,2.6303487891309,2.22437799380478,1.0447564995665,0.823128545631774,1.59227413454795,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.710234206755631,0.196764231747404,0.154267112887378,0.465067889500816,0.268273401399619,0,0.493679549740441,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,13.8791366052324,18.4199256158919,0,0,4.05247676016945,2.78684006232526,1.54640953586512,0.403367049246685,0.444756087689741,0.951128130562796,0.949058123089023,0.494096864172033,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0.199141273254367,2.84501851429623,1.71372768914593,2.25415471346161,2.8511185898344,2.13347735884388,1.1221731182451,0.252946148497029,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,2.08440552947533,1.14075483509418,1.01847051465113,0.704070744865506,0.502518772325447,0,0,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,18.3027672586083,19.2227166011213,0,0.252470927204373,4.73262329124385,4.29482618726302,7.53981892064796,3.58453196928828,6.90675889655422,3.67999490025482,6.07216052512342,6.42962887404886,9.48690667071656,6.74774764485795,0.567760340833074,1.95872164033981,0.651547837414304,1.15479086080775,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0,0,0,0,0,0,0,2.04263763452273,5.76195500900193,7.1147276080515,5.5727629108214,4.25616560741457,4.8159580752559,4.44282355625727,2.74018454203139,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,18.3571048990405,0,0,0,0,0.136694227721025,0,0,0,0,0,4.4287039101359,2.43983360552218,1.18805874903981,0.418176592028937,0.655087691238533,0.269728692769641,0.247960367176008,0.26175594198403,0.388844919875379,0,1.12738587736838,0.448549638131936,2.15096037594227,7.58359634541786,5.29555276258697,4.05494701177868,3.28600268208111,1.95306577265925,4.71867049915699,0.966336483304024,0.288030006257865,0,0.810900861160657,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,3.10780334723691,2.69141569828427,2.3503846290971,0.19318959403219,0.750729901804728,0.73260649706906,0,0.501572104035363,27.1080884456192,19.7939851698086,26.3531936182122,14.7793736815571,17.8121455140367,30.9711497929777,19.5756525067224,23.4167025676595,22.6571204492102,20.7104124700728,4.8780053364563,4.38927360741134,7.5122786531819,2.67417388775123,2.93458427679175,3.49302666055027,2.00022055021454,3.09052585858341,2.24643446714271,2.27427490587418,4.30914809813408,3.58390048633545,3.37109426891577,3.26528277264833,3.15895079255873,2.85776214769844,3.47652977834566,2.50781986602817,4.53294490883637,2.94397840268795,3.77156177623957,2.8396128985494,2.62279808942053,3.19762116591123,3.29382831453657,3.80765735512544,2.74391959309159,1.31534855718921,3.25929873230068,5.05028044491965,3.6776855618494,3.54616136552028,4.50154147486658,3.25367366490529,0.964533054905707,6.49507502638659,1.87145286756327,2.79332370262788,0.765153328275374,0.661774257358546,0.463735671240843|short_description=p1@Fsd1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240121 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TPM6 | |||
|association_with_transcript=-19bp_to_ENSMUST00000011733,NM_183178,uc008dan.1_5end | |||
|cluster_id=chr17:56125889..56125914,+ | |||
|description=CAGE_peak_1_at_Fsd1_5end | |||
|id=chr17:56125889..56125914,+ | |||
|ontology_enrichment_celltype=CL:0000221!5.16e-20!44;CL:0000133!5.16e-20!44;CL:0002319!9.67e-20!43;CL:0000540!3.90e-18!33;CL:0000047!3.90e-18!33;CL:0000031!3.90e-18!33;CL:0000404!3.90e-18!33;CL:0000055!1.78e-16!50;CL:0000393!2.17e-15!39;CL:0000211!2.17e-15!39;CL:0000117!2.28e-15!23;CL:0000337!2.28e-15!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.64e-22,44;CL:0000133,1.64e-22,44;CL:0002319,3.45e-22,43;CL:0000540,5.14e-21,33;CL:0000047,5.14e-21,33;CL:0000031,5.14e-21,33;CL:0000404,5.14e-21,33;CL:0000117,9.11e-18,23;CL:0000337,9.11e-18,23;CL:0000393,1.03e-16,39;CL:0000211,1.03e-16,39;CL:0002321,2.08e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.53e-38!73;UBERON:0005743!1.53e-38!73;UBERON:0000073!3.36e-38!75;UBERON:0001016!3.36e-38!75;UBERON:0004121!4.41e-31!102;UBERON:0000924!4.41e-31!102;UBERON:0006601!4.41e-31!102;UBERON:0002346!2.10e-30!71;UBERON:0003075!2.10e-30!71;UBERON:0007284!2.10e-30!71;UBERON:0001049!2.56e-28!52;UBERON:0005068!2.56e-28!52;UBERON:0006241!2.56e-28!52;UBERON:0007135!2.56e-28!52;UBERON:0000033!3.41e-26!63;UBERON:0000955!5.76e-26!50;UBERON:0006238!5.76e-26!50;UBERON:0002616!1.64e-25!49;UBERON:0003056!5.10e-23!49;UBERON:0002020!2.86e-21!34;UBERON:0003080!3.92e-21!40;UBERON:0002780!1.44e-20!39;UBERON:0001890!1.44e-20!39;UBERON:0006240!1.44e-20!39;UBERON:0002791!1.76e-17!29;UBERON:0003528!1.76e-17!29;UBERON:0001893!1.76e-17!29;UBERON:0000153!1.42e-13!94;UBERON:0007811!7.20e-13!86;UBERON:0000956!1.93e-12!21;UBERON:0001869!1.93e-12!21;UBERON:0000203!1.93e-12!21;UBERON:0002619!2.40e-10!17;UBERON:0003076!1.30e-07!12;UBERON:0003057!1.30e-07!12;UBERON:0002021!1.31e-07!10;UBERON:0000411!1.31e-07!10;UBERON:0001950!1.31e-07!10;UBERON:0000468!2.82e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.25e-45,73;UBERON:0001016,8.50e-44,75;UBERON:0004121,7.17e-38,95;UBERON:0000924,7.17e-38,95;UBERON:0006601,7.17e-38,95;UBERON:0002346,2.11e-36,64;UBERON:0003075,2.11e-36,64;UBERON:0007284,2.11e-36,64;UBERON:0000073,1.99e-34,54;UBERON:0001049,5.52e-33,52;UBERON:0005068,5.52e-33,52;UBERON:0006241,5.52e-33,52;UBERON:0007135,5.52e-33,52;UBERON:0010371,2.69e-30,73;UBERON:0000955,4.62e-28,47;UBERON:0006238,4.62e-28,47;UBERON:0002616,1.55e-27,46;UBERON:0003056,3.14e-26,49;UBERON:0002020,1.06e-24,34;UBERON:0003080,1.54e-24,40;UBERON:0002780,7.11e-24,39;UBERON:0001890,7.11e-24,39;UBERON:0006240,7.11e-24,39;UBERON:0010314,1.34e-21,92;UBERON:0003528,3.01e-20,29;UBERON:0002791,3.01e-20,29;UBERON:0001893,3.01e-20,29;UBERON:0000956,2.50e-14,21;UBERON:0001869,2.50e-14,21;UBERON:0000203,2.50e-14,21;UBERON:0002619,7.19e-12,17;UBERON:0003076,1.15e-08,12;UBERON:0003057,1.15e-08,12;UBERON:0002021,1.16e-08,10;UBERON:0000411,1.16e-08,10;UBERON:0001950,1.16e-08,10;UBERON:0002420,4.14e-07,8;UBERON:0007245,4.14e-07,8;UBERON:0010009,4.14e-07,8;UBERON:0010011,4.14e-07,8;UBERON:0000454,4.14e-07,8 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.734187008646726,1.56478268869608,4.79655344036982,4.17403747195497,3.11087838518853,2.37976916763116,12.9377307928474,0,0,0,1.28629718017973,0.573066879877513,1.03134418455488,23.0640765379941,26.4495489636016,17.747279298173,3.38844532069132,0.889294796111139,0.899899717281399,0,0.7104801149461,11.9840044207362,12.2949857702897,14.9313041724208,18.4958135514416,18.2982716375702,33.9924671440526,36.8850463389195,15.6788222995141,16.0061936600455,15.6267193723704,13.2139057199266,16.98241596533,20.1224558565679,26.6410301214992,22.1400097517831,21.8783615633839,27.9182999001381,20.2594539611405,16.1966142643419,31.8198872311561,34.0268317109856,25.3503246322409,0.832988126665025,1.36028808192214,0,0,0,0,0,0,0.561777680527007,0,0,0,4.08445917352373,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,2.08182392119363,1.82679286987285,1.38369298353635,1.20578112442098,0.823120949949934,0.251333182659351,0,0,0,0.161766849947409,0,0,1.86391761218122,13.1751358655196,14.2423760633149,0,0,0,0,15.8778077769112,9.15001205637253,25.5078334789115,13.210648334613,20.2015211290961,17.6619837875626,14.4394724130304,1.62942982160506,0.124406970610093,0,0.420883711772948,4.03373373184381,7.58676944630461,4.50155324513373,3.76762044589288,3.74200745332303,4.35586648968489,3.5606655332697,4.13925393182425,4.095791865724,4.72765200419548,4.39877810409872,2.6303487891309,2.22437799380478,1.0447564995665,0.823128545631774,1.59227413454795,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.710234206755631,0.196764231747404,0.154267112887378,0.465067889500816,0.268273401399619,0,0.493679549740441,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,13.8791366052324,18.4199256158919,0,0,4.05247676016945,2.78684006232526,1.54640953586512,0.403367049246685,0.444756087689741,0.951128130562796,0.949058123089023,0.494096864172033,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0.199141273254367,2.84501851429623,1.71372768914593,2.25415471346161,2.8511185898344,2.13347735884388,1.1221731182451,0.252946148497029,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,2.08440552947533,1.14075483509418,1.01847051465113,0.704070744865506,0.502518772325447,0,0,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,18.3027672586083,19.2227166011213,0,0.252470927204373,4.73262329124385,4.29482618726302,7.53981892064796,3.58453196928828,6.90675889655422,3.67999490025482,6.07216052512342,6.42962887404886,9.48690667071656,6.74774764485795,0.567760340833074,1.95872164033981,0.651547837414304,1.15479086080775,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0,0,0,0,0,0,0,2.04263763452273,5.76195500900193,7.1147276080515,5.5727629108214,4.25616560741457,4.8159580752559,4.44282355625727,2.74018454203139,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,18.3571048990405,0,0,0,0,0.136694227721025,0,0,0,0,0,4.4287039101359,2.43983360552218,1.18805874903981,0.418176592028937,0.655087691238533,0.269728692769641,0.247960367176008,0.26175594198403,0.388844919875379,0,1.12738587736838,0.448549638131936,2.15096037594227,7.58359634541786,5.29555276258697,4.05494701177868,3.28600268208111,1.95306577265925,4.71867049915699,0.966336483304024,0.288030006257865,0,0.810900861160657,0.410843828659309,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,3.10780334723691,2.69141569828427,2.3503846290971,0.19318959403219,0.750729901804728,0.73260649706906,0,0.501572104035363,27.1080884456192,19.7939851698086,26.3531936182122,14.7793736815571,17.8121455140367,30.9711497929777,19.5756525067224,23.4167025676595,22.6571204492102,20.7104124700728,4.8780053364563,4.38927360741134,7.5122786531819,2.67417388775123,2.93458427679175,3.49302666055027,2.00022055021454,3.09052585858341,2.24643446714271,2.27427490587418,4.30914809813408,3.58390048633545,3.37109426891577,3.26528277264833,3.15895079255873,2.85776214769844,3.47652977834566,2.50781986602817,4.53294490883637,2.94397840268795,3.77156177623957,2.8396128985494,2.62279808942053,3.19762116591123,3.29382831453657,3.80765735512544,2.74391959309159,1.31534855718921,3.25929873230068,5.05028044491965,3.6776855618494,3.54616136552028,4.50154147486658,3.25367366490529,0.964533054905707,6.49507502638659,1.87145286756327,2.79332370262788,0.765153328275374,0.661774257358546,0.463735671240843 | |||
|short_description=p1@Fsd1 | |||
}} |
Latest revision as of 16:43, 26 September 2015
Short description: | p1@Fsd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fsd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -19bp_to_ENSMUST00000011733, NM_183178, uc008dan.1_5end |
EntrezGene: | Fsd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.64e-22 | 44 |
neurectodermal cell | 1.64e-22 | 44 |
neural cell | 3.45e-22 | 43 |
neuron | 5.14e-21 | 33 |
neuronal stem cell | 5.14e-21 | 33 |
neuroblast | 5.14e-21 | 33 |
electrically signaling cell | 5.14e-21 | 33 |
CNS neuron (sensu Vertebrata) | 9.11e-18 | 23 |
neuroblast (sensu Vertebrata) | 9.11e-18 | 23 |
electrically responsive cell | 1.03e-16 | 39 |
electrically active cell | 1.03e-16 | 39 |
embryonic cell | 2.08e-08 | 70 |