FFCP PHASE1:Mm9::chr1:165709876..165709894,+: Difference between revisions
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{{FFCP|EntrezGene=16579|HGNC=|MCL_coexpression_id=1|UniProt=P70188|association_with_transcript=66bp_to_NM_010629,uc007dho.1_5end|description=CAGE_peak_5_at_Kifap3_5end|id=chr1:165709876..165709894,+|ontology_enrichment_celltype=CL:0000117!3.06e-08!23;CL:0000337!3.06e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.88e-11,23;CL:0000337,8.88e-11,23;CL:0000540,8.26e-07,33;CL:0000047,8.26e-07,33;CL:0000031,8.26e-07,33;CL:0000404,8.26e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.67e-20!71;UBERON:0003075!3.67e-20!71;UBERON:0007284!3.67e-20!71;UBERON:0001049!3.20e-18!52;UBERON:0005068!3.20e-18!52;UBERON:0006241!3.20e-18!52;UBERON:0007135!3.20e-18!52;UBERON:0000033!5.85e-18!63;UBERON:0000073!1.85e-17!75;UBERON:0001016!1.85e-17!75;UBERON:0004121!2.79e-17!102;UBERON:0000924!2.79e-17!102;UBERON:0006601!2.79e-17!102;UBERON:0001017!4.34e-17!73;UBERON:0005743!4.34e-17!73;UBERON:0000955!4.39e-17!50;UBERON:0006238!4.39e-17!50;UBERON:0002616!1.41e-16!49;UBERON:0003056!1.70e-16!49;UBERON:0002020!2.35e-14!34;UBERON:0003080!5.53e-14!40;UBERON:0002780!1.95e-13!39;UBERON:0001890!1.95e-13!39;UBERON:0006240!1.95e-13!39;UBERON:0002791!1.19e-11!29;UBERON:0003528!1.19e-11!29;UBERON:0001893!1.19e-11!29;UBERON:0000153!2.60e-11!94;UBERON:0007811!2.69e-10!86;UBERON:0002021!6.54e-08!10;UBERON:0000411!6.54e-08!10;UBERON:0001950!6.54e-08!10;UBERON:0000025!9.54e-08!114;UBERON:0000956!1.18e-07!21;UBERON:0001869!1.18e-07!21;UBERON:0000203!1.18e-07!21;UBERON:0002619!3.80e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.07e-25,64;UBERON:0003075,1.07e-25,64;UBERON:0007284,1.07e-25,64;UBERON:0000073,9.43e-25,54;UBERON:0001049,3.33e-23,52;UBERON:0005068,3.33e-23,52;UBERON:0006241,3.33e-23,52;UBERON:0007135,3.33e-23,52;UBERON:0010371,1.49e-21,73;UBERON:0003056,3.28e-21,49;UBERON:0001016,2.49e-20,75;UBERON:0001017,2.67e-20,73;UBERON:0004121,1.33e-19,95;UBERON:0000924,1.33e-19,95;UBERON:0006601,1.33e-19,95;UBERON:0000955,1.84e-19,47;UBERON:0006238,1.84e-19,47;UBERON:0002616,8.10e-19,46;UBERON:0002020,1.68e-18,34;UBERON:0010314,1.79e-17,92;UBERON:0003080,1.85e-17,40;UBERON:0002780,9.41e-17,39;UBERON:0001890,9.41e-17,39;UBERON:0006240,9.41e-17,39;UBERON:0003528,5.58e-15,29;UBERON:0002791,5.58e-15,29;UBERON:0001893,5.58e-15,29;UBERON:0002021,8.63e-10,10;UBERON:0000411,8.63e-10,10;UBERON:0001950,8.63e-10,10;UBERON:0000956,8.95e-10,21;UBERON:0001869,8.95e-10,21;UBERON:0000203,8.95e-10,21;UBERON:0002619,4.80e-09,17;UBERON:0000025,9.79e-08,114|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0.42438965179803,1.53077922271926,0.0992909512008853,0,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0,0.881277725829041,0.405507724878058,0.183546752161682,0,0.436050312760893,0.439372365468944,1.36100929351998,0.419959264876088,0,0.335565212115473,0,0,1.28629718017973,1.14613375975503,1.54701627683233,3.43937983461316,2.11596391708813,1.26766280701236,0,1.77858959222228,0.449949858640699,0,0,0.599200221036809,0.384218305321555,2.28117147078651,1.4850653216486,0.210324961351382,3.42781181284564,1.98781686856452,1.22490799214954,1.0543001812006,0,6.60695285996332,4.46905683298157,3.99376986466233,2.76961204233407,3.7509933876988,4.16730696445408,2.51264699101243,2.8138130501584,5.34793867218835,5.89257170947335,5.69486723196412,5.59198337475902,0.681535739998656,2.56943304363071,1.15945795480671,0,0,0,1.29955283489534,0.448026887097336,0.561777680527007,2.89731548382698,2.07828803682295,0.70667914902068,0.563373679106722,2.56652954828636,2.54805239706646,7.11066703153331,0,0.506719730950197,0.505524445014783,0.22836775943812,0.258937883647172,1.03909497345377,0.693941307064543,0.608930956624282,1.38369298353635,1.05505848386836,1.76383060703557,0.753999547978053,0.247194967734374,1.44599356919912,0.884610551949874,0.808834249737046,0,0.484875253135222,0,3.22058876712702,5.23616767033638,0,0.479260498023681,0,0.127070227073065,4.34392854273986,6.40500843946077,3.76963056338593,7.64827008846016,12.0186264945255,6.64921742590592,7.94982189032012,0.712875546952214,0.622034853050465,0.758168275301024,0,1.69156575851515,2.29902104433473,3.24111833649629,1.65775299619287,2.51735046859913,2.8185018462667,1.96773621575431,3.88055056108524,1.72454394346274,0.945530400839096,1.40760899331159,1.31517439456545,1.39023624612799,1.0447564995665,1.4404749548556,0.398068533636986,0,0,0,0.621377317606506,0.703578179943289,1.08037236876609,0.710234206755631,1.18058539048442,0.462801338662135,0.930135779001631,0.268273401399619,0.817357396570186,0.658239399653922,0.164167464079095,0.405344047729279,0.292399974850665,0,0.536825675041487,5.67782861123144,4.6307075570678,0,0,0.853153002140936,0.464473343720877,0.257734922644187,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0.398282546508734,0.948339504765408,1.02823661348756,0,1.2219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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16579 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P70188 | |||
|association_with_transcript=66bp_to_NM_010629,uc007dho.1_5end | |||
|cluster_id=chr1:165709876..165709894,+ | |||
|description=CAGE_peak_5_at_Kifap3_5end | |||
|id=chr1:165709876..165709894,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.06e-08!23;CL:0000337!3.06e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.88e-11,23;CL:0000337,8.88e-11,23;CL:0000540,8.26e-07,33;CL:0000047,8.26e-07,33;CL:0000031,8.26e-07,33;CL:0000404,8.26e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.67e-20!71;UBERON:0003075!3.67e-20!71;UBERON:0007284!3.67e-20!71;UBERON:0001049!3.20e-18!52;UBERON:0005068!3.20e-18!52;UBERON:0006241!3.20e-18!52;UBERON:0007135!3.20e-18!52;UBERON:0000033!5.85e-18!63;UBERON:0000073!1.85e-17!75;UBERON:0001016!1.85e-17!75;UBERON:0004121!2.79e-17!102;UBERON:0000924!2.79e-17!102;UBERON:0006601!2.79e-17!102;UBERON:0001017!4.34e-17!73;UBERON:0005743!4.34e-17!73;UBERON:0000955!4.39e-17!50;UBERON:0006238!4.39e-17!50;UBERON:0002616!1.41e-16!49;UBERON:0003056!1.70e-16!49;UBERON:0002020!2.35e-14!34;UBERON:0003080!5.53e-14!40;UBERON:0002780!1.95e-13!39;UBERON:0001890!1.95e-13!39;UBERON:0006240!1.95e-13!39;UBERON:0002791!1.19e-11!29;UBERON:0003528!1.19e-11!29;UBERON:0001893!1.19e-11!29;UBERON:0000153!2.60e-11!94;UBERON:0007811!2.69e-10!86;UBERON:0002021!6.54e-08!10;UBERON:0000411!6.54e-08!10;UBERON:0001950!6.54e-08!10;UBERON:0000025!9.54e-08!114;UBERON:0000956!1.18e-07!21;UBERON:0001869!1.18e-07!21;UBERON:0000203!1.18e-07!21;UBERON:0002619!3.80e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.07e-25,64;UBERON:0003075,1.07e-25,64;UBERON:0007284,1.07e-25,64;UBERON:0000073,9.43e-25,54;UBERON:0001049,3.33e-23,52;UBERON:0005068,3.33e-23,52;UBERON:0006241,3.33e-23,52;UBERON:0007135,3.33e-23,52;UBERON:0010371,1.49e-21,73;UBERON:0003056,3.28e-21,49;UBERON:0001016,2.49e-20,75;UBERON:0001017,2.67e-20,73;UBERON:0004121,1.33e-19,95;UBERON:0000924,1.33e-19,95;UBERON:0006601,1.33e-19,95;UBERON:0000955,1.84e-19,47;UBERON:0006238,1.84e-19,47;UBERON:0002616,8.10e-19,46;UBERON:0002020,1.68e-18,34;UBERON:0010314,1.79e-17,92;UBERON:0003080,1.85e-17,40;UBERON:0002780,9.41e-17,39;UBERON:0001890,9.41e-17,39;UBERON:0006240,9.41e-17,39;UBERON:0003528,5.58e-15,29;UBERON:0002791,5.58e-15,29;UBERON:0001893,5.58e-15,29;UBERON:0002021,8.63e-10,10;UBERON:0000411,8.63e-10,10;UBERON:0001950,8.63e-10,10;UBERON:0000956,8.95e-10,21;UBERON:0001869,8.95e-10,21;UBERON:0000203,8.95e-10,21;UBERON:0002619,4.80e-09,17;UBERON:0000025,9.79e-08,114 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0.42438965179803,1.53077922271926,0.0992909512008853,0,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0,0.881277725829041,0.405507724878058,0.183546752161682,0,0.436050312760893,0.439372365468944,1.36100929351998,0.419959264876088,0,0.335565212115473,0,0,1.28629718017973,1.14613375975503,1.54701627683233,3.43937983461316,2.11596391708813,1.26766280701236,0,1.77858959222228,0.449949858640699,0,0,0.599200221036809,0.384218305321555,2.28117147078651,1.4850653216486,0.210324961351382,3.42781181284564,1.98781686856452,1.22490799214954,1.0543001812006,0,6.60695285996332,4.46905683298157,3.99376986466233,2.76961204233407,3.7509933876988,4.16730696445408,2.51264699101243,2.8138130501584,5.34793867218835,5.89257170947335,5.69486723196412,5.59198337475902,0.681535739998656,2.56943304363071,1.15945795480671,0,0,0,1.29955283489534,0.448026887097336,0.561777680527007,2.89731548382698,2.07828803682295,0.70667914902068,0.563373679106722,2.56652954828636,2.54805239706646,7.11066703153331,0,0.506719730950197,0.505524445014783,0.22836775943812,0.258937883647172,1.03909497345377,0.693941307064543,0.608930956624282,1.38369298353635,1.05505848386836,1.76383060703557,0.753999547978053,0.247194967734374,1.44599356919912,0.884610551949874,0.808834249737046,0,0.484875253135222,0,3.22058876712702,5.23616767033638,0,0.479260498023681,0,0.127070227073065,4.34392854273986,6.40500843946077,3.76963056338593,7.64827008846016,12.0186264945255,6.64921742590592,7.94982189032012,0.712875546952214,0.622034853050465,0.758168275301024,0,1.69156575851515,2.29902104433473,3.24111833649629,1.65775299619287,2.51735046859913,2.8185018462667,1.96773621575431,3.88055056108524,1.72454394346274,0.945530400839096,1.40760899331159,1.31517439456545,1.39023624612799,1.0447564995665,1.4404749548556,0.398068533636986,0,0,0,0.621377317606506,0.703578179943289,1.08037236876609,0.710234206755631,1.18058539048442,0.462801338662135,0.930135779001631,0.268273401399619,0.817357396570186,0.658239399653922,0.164167464079095,0.405344047729279,0.292399974850665,0,0.536825675041487,5.67782861123144,4.6307075570678,0,0,0.853153002140936,0.464473343720877,0.257734922644187,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0.398282546508734,0.948339504765408,1.02823661348756,0,1.22190796707189,1.16371492300575,0.911765658574141,0.316182685621286,0.738050739898011,0.627994911365499,0.740382983530803,0,0.333690211432188,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0.179397413521912,0.482443521363367,0.554259570499814,1.51593129416388,1.46668478797823,1.35796068620151,1.40814148973101,1.17254380209271,0.476087281772027,0.780534591431195,0.945810864637146,1.32878813789265,1.2756381492599,1.14704320301017,0.690739927463582,1.01254341007058,0,0,0,0,5.13761887960934,6.68106613575558,0.983609672260053,0,0.315508219416257,0.390438744296638,1.07711698866399,0.955875191810208,0.445597348164788,0.283076530788832,0,1.16902343164525,0.790575555893047,2.89189184779626,0.567760340833074,0.35613120733451,0.651547837414304,0.659880491890142,1.32745138339963,0.971122544619926,0.302323556964751,0.754420319023592,0,0.922305443831782,1.29214146584111,0.363533729477506,0.712994756769443,0.632073515871632,0,0,1.02131881726136,1.8006109403131,0.646793418913773,1.50035924522115,1.77340233642274,1.24858172321449,1.97458824722545,0.304464949114599,0.469343416127421,1.0591603543191,0.220528398054962,0.49465875882444,1.93757312035087,0.784068024066026,0.358117032009409,0.492422699235184,0,5.37733375830478,0,0.619160603889667,0.370389054739423,0,0.136694227721025,0,0.339956859987711,0.139951452323658,0.138199973804424,0.954670618015114,0.790839983952838,1.21991680276109,0.648032044930808,0.418176592028937,0.87345025498471,0.539457385539283,0.41326727862668,0,0.388844919875379,0,1.12738587736838,0.598066184175915,1.15820943319968,1.16670713006429,0.387479470433193,1.18269287843545,1.17357238645754,0.13020438484395,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0.410843828659309,0.25984164595559,0.358053391334963,0.39736270956253,0.360586348559907,0.443068581523732,0.403865799792591,0.381034033274999,0.302478555410522,0.194915761479505,0,0.350630706544707,0.226730383615211,1.10992976687032,0.897138566094757,0.167884616364078,0.386379188064381,0,0.183151624267265,0,0,14.6835479080437,10.1271552031579,13.1765968091061,9.79563139359019,7.53590771747707,4.5323633843382,8.10027000278167,4.05289082901798,6.34399372577886,7.7664046762773,1.66059756134683,1.19707462020309,1.70733605754134,0.486213434136588,1.25767897576789,1.2869045591501,1.77797382241292,1.64828045791115,0.962757628775446,1.51618327058278,1.52087579934144,2.26351609663291,1.03005658216871,1.92075457214608,1.49332219284595,0.4762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| |||
|short_description=p5@Kifap3 | |||
}} |
Latest revision as of 16:41, 26 September 2015
Short description: | p5@Kifap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Kifap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 66bp_to_NM_010629, uc007dho.1_5end |
EntrezGene: | Kifap3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.88e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.88e-11 | 23 |
neuron | 8.26e-07 | 33 |
neuronal stem cell | 8.26e-07 | 33 |
neuroblast | 8.26e-07 | 33 |
electrically signaling cell | 8.26e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.07e-25 | 64 |
neural plate | 1.07e-25 | 64 |
presumptive neural plate | 1.07e-25 | 64 |
regional part of nervous system | 9.43e-25 | 54 |
neural tube | 3.33e-23 | 52 |
neural rod | 3.33e-23 | 52 |
future spinal cord | 3.33e-23 | 52 |
neural keel | 3.33e-23 | 52 |
ecto-epithelium | 1.49e-21 | 73 |
pre-chordal neural plate | 3.28e-21 | 49 |
nervous system | 2.49e-20 | 75 |
central nervous system | 2.67e-20 | 73 |
ectoderm-derived structure | 1.33e-19 | 95 |
ectoderm | 1.33e-19 | 95 |
presumptive ectoderm | 1.33e-19 | 95 |
brain | 1.84e-19 | 47 |
future brain | 1.84e-19 | 47 |
regional part of brain | 8.10e-19 | 46 |
gray matter | 1.68e-18 | 34 |
structure with developmental contribution from neural crest | 1.79e-17 | 92 |
anterior neural tube | 1.85e-17 | 40 |
regional part of forebrain | 9.41e-17 | 39 |
forebrain | 9.41e-17 | 39 |
future forebrain | 9.41e-17 | 39 |
brain grey matter | 5.58e-15 | 29 |
regional part of telencephalon | 5.58e-15 | 29 |
telencephalon | 5.58e-15 | 29 |
occipital lobe | 8.63e-10 | 10 |
visual cortex | 8.63e-10 | 10 |
neocortex | 8.63e-10 | 10 |
cerebral cortex | 8.95e-10 | 21 |
cerebral hemisphere | 8.95e-10 | 21 |
pallium | 8.95e-10 | 21 |
regional part of cerebral cortex | 4.80e-09 | 17 |
tube | 9.79e-08 | 114 |