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FFCP PHASE1:Mm9::chr1:16509282..16509341,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=29819
|EntrezGene=29819
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8CJ67,D6RGR9
|UniProt=Q8CJ67,D6RGR9
|association_with_transcript=0bp_to_ENSMUST00000054668,ENSMUST00000115359,ENSMUST00000116646,ENSMUST00000127420,ENSMUST00000128957,ENSMUST00000159558,ENSMUST00000162007,ENSMUST00000162627_5end
|association_with_transcript=0bp_to_ENSMUST00000054668,ENSMUST00000115359,ENSMUST00000116646,ENSMUST00000127420,ENSMUST00000128957,ENSMUST00000159558,ENSMUST00000162007,ENSMUST00000162627_5end
|cluster_id=chr1:16509282..16509341,-
|description=CAGE_peak_1_at_Stau2_5end
|description=CAGE_peak_1_at_Stau2_5end
|id=chr1:16509282..16509341,-
|id=chr1:16509282..16509341,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.02e-12!52;UBERON:0005068!2.02e-12!52;UBERON:0006241!2.02e-12!52;UBERON:0007135!2.02e-12!52;UBERON:0002020!1.01e-11!34;UBERON:0000955!1.73e-11!50;UBERON:0006238!1.73e-11!50;UBERON:0000033!4.39e-11!63;UBERON:0002616!5.63e-11!49;UBERON:0002346!1.07e-10!71;UBERON:0003075!1.07e-10!71;UBERON:0007284!1.07e-10!71;UBERON:0001017!6.62e-10!73;UBERON:0005743!6.62e-10!73;UBERON:0000468!7.20e-10!333;UBERON:0004121!8.60e-10!102;UBERON:0000924!8.60e-10!102;UBERON:0006601!8.60e-10!102;UBERON:0003080!2.08e-09!40;UBERON:0002791!2.97e-09!29;UBERON:0003528!2.97e-09!29;UBERON:0001893!2.97e-09!29;UBERON:0000073!4.18e-09!75;UBERON:0001016!4.18e-09!75;UBERON:0003056!5.31e-09!49;UBERON:0002780!6.79e-09!39;UBERON:0001890!6.79e-09!39;UBERON:0006240!6.79e-09!39;UBERON:0002021!5.21e-08!10;UBERON:0000411!5.21e-08!10;UBERON:0001950!5.21e-08!10;UBERON:0004111!3.20e-07!122;UBERON:0000922!5.74e-07!328
|ontology_enrichment_uberon=UBERON:0001049!2.02e-12!52;UBERON:0005068!2.02e-12!52;UBERON:0006241!2.02e-12!52;UBERON:0007135!2.02e-12!52;UBERON:0002020!1.01e-11!34;UBERON:0000955!1.73e-11!50;UBERON:0006238!1.73e-11!50;UBERON:0000033!4.39e-11!63;UBERON:0002616!5.63e-11!49;UBERON:0002346!1.07e-10!71;UBERON:0003075!1.07e-10!71;UBERON:0007284!1.07e-10!71;UBERON:0001017!6.62e-10!73;UBERON:0005743!6.62e-10!73;UBERON:0000468!7.20e-10!333;UBERON:0004121!8.60e-10!102;UBERON:0000924!8.60e-10!102;UBERON:0006601!8.60e-10!102;UBERON:0003080!2.08e-09!40;UBERON:0002791!2.97e-09!29;UBERON:0003528!2.97e-09!29;UBERON:0001893!2.97e-09!29;UBERON:0000073!4.18e-09!75;UBERON:0001016!4.18e-09!75;UBERON:0003056!5.31e-09!49;UBERON:0002780!6.79e-09!39;UBERON:0001890!6.79e-09!39;UBERON:0006240!6.79e-09!39;UBERON:0002021!5.21e-08!10;UBERON:0000411!5.21e-08!10;UBERON:0001950!5.21e-08!10;UBERON:0004111!3.20e-07!122;UBERON:0000922!5.74e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.82e-13,54;UBERON:0001049,1.72e-12,52;UBERON:0005068,1.72e-12,52;UBERON:0006241,1.72e-12,52;UBERON:0007135,1.72e-12,52;UBERON:0010314,6.96e-12,92;UBERON:0002020,1.25e-11,34;UBERON:0010371,1.34e-11,73;UBERON:0002346,2.35e-11,64;UBERON:0003075,2.35e-11,64;UBERON:0007284,2.35e-11,64;UBERON:0000955,4.09e-10,47;UBERON:0006238,4.09e-10,47;UBERON:0004121,6.12e-10,95;UBERON:0000924,6.12e-10,95;UBERON:0006601,6.12e-10,95;UBERON:0001017,6.93e-10,73;UBERON:0002616,1.28e-09,46;UBERON:0003080,2.49e-09,40;UBERON:0003528,3.70e-09,29;UBERON:0002791,3.70e-09,29;UBERON:0001893,3.70e-09,29;UBERON:0001016,4.38e-09,75;UBERON:0003056,6.23e-09,49;UBERON:0002780,8.14e-09,39;UBERON:0001890,8.14e-09,39;UBERON:0006240,8.14e-09,39;UBERON:0002021,4.92e-08,10;UBERON:0000411,4.92e-08,10;UBERON:0001950,4.92e-08,10;UBERON:0004111,3.90e-07,122
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066435747241,1.81889152168913,1.25318686967237,0.596044064343795,1.08175904567972,2.06765338044408,0.807731599585181,0.533447646584999,1.00826185136841,1.07203668813728,0.577271049841977,0.584384510907845,4.98806843953465,0.665957860122194,0.62799699626633,1.67884616364078,3.86379188064381,3.19060208267009,5.86085197655248,5.78794623513478,3.51100472824754,19.7663144915973,27.6195141904306,28.0718801585304,19.4194096048367,17.1270629942661,18.1294535373528,16.8755625057951,21.6154177547626,28.0948293570207,20.192652158321,2.49089634202024,2.79317411380722,4.26834014385335,4.37592090722929,6.28839487883947,5.88299227040045,6.00066165064361,4.53277125925567,3.85103051510178,5.81203587056734,5.57654459758527,7.1678009726709,6.9294715527713,7.2988673741551,5.91585330242817,3.81034953026459,7.64836551236046,6.17309505483856,3.70877310722976,6.62395140604788,6.51451579532289,6.56660482789549,8.82213902805088,7.41266724824875,7.24642229198046,6.26148098398406,5.12198324043763,5.5244639401947,7.33342214767654,5.05028044491965,5.93175090620871,6.2057823896605,6.95692773388472,6.50734732981057,5.20847849649082,8.74337022782811,5.38042699424439,5.58664740525576,3.82576664137687,5.07360263974886,5.33296021926969
|phase1_expression=2.5623815536767,3.14077866875425,0.454999239389536,3.62957053568196,0.500895729946347,1.84667199103079,3.27057696833736,0.774739940649458,1.97104211012333,4.21316147379588,2.05461561870606,0.797721589953364,0,0,0,0,0,1.10411757875383,0.274228867211478,0.84877930359606,4.33720779770456,0.0992909512008853,0,2.23989391910769,1.37645568640302,1.14846392823004,0.430761996159075,1.07735616342945,2.85035129184561,1.00812051903972,0.665191531965914,0,0,0,1.44425809875637,2.49351968037739,2.85837098767317,0,0,0,0,0,0,3.14742044938943,3.34543873024398,4.9557623083654,0,0,1.09843091367236,0.972149495371417,0.979904951377538,0,2.01339127269284,0,0,1.54355661621568,2.29226751951005,1.54701627683233,4.04632921719196,6.34789175126439,5.70448263155561,0.677689064138264,2.66788438833342,0,0,0.7104801149461,0.599200221036809,0.384218305321555,3.21437798156281,3.24014251996058,3.78584930432488,9.42648248532552,7.73039893330647,3.1847607795888,3.54628242767475,5.51531271966013,7.70811166995721,12.6410464704336,10.4452442614246,5.53922408466814,8.32537556781928,8.33461392890816,5.58365998002762,6.75315132038016,9.62628960993904,12.0797720044204,17.0846016958924,6.52398060388552,1.66597625333005,1.51143120213571,2.02905142091174,0.860423876981386,2.03991400112325,1.07940638327563,2.59910566979068,2.24013443548668,3.37066608316204,2.38602451609281,1.81850203222008,1.7666978725517,3.66192891419369,1.28326477414318,0,0,2.38140145112336,4.81383744402687,3.0331466700887,2.96878087269556,3.88406825470758,5.49235914539852,3.64319186208885,1.82679286987285,4.15107895060905,4.37095657602605,4.35078216402108,2.13633205260448,1.97755974187499,7.08536848907567,0,2.42650274921114,1.54589062922275,2.42437626567611,3.72783522436244,7.02673912827713,8.3778682725382,2.29911349687732,0.838705871541442,0.599902730993408,0.635351135365324,16.1773890557209,21.5025283324754,15.0785222535437,28.1595398711488,17.9000820131231,16.2074674756457,17.3598151482501,2.24046600470696,3.35898820647251,14.6579199891531,6.52369753248069,3.3831315170303,2.5289231487682,3.24111833649629,5.12396380641431,3.40182495756639,4.74020765053944,3.65436725782942,4.65666067330228,2.37124792226126,4.16033376369202,5.27853372491847,2.6303487891309,5.28289773528636,4.52727816478817,6.58502836505419,4.37875387000685,0,0.772043721344145,0.284163499395593,3.72826390563903,2.81431271977315,3.06105504483725,3.55117103377815,5.50939848892731,5.39934895105824,4.65067889500816,6.43856163359086,5.7215017759913,6.41783414662574,6.40253109908471,4.78305976320549,6.14039947186396,9.66020507280623,5.77087600669599,22.2907345477975,11.3195073617213,3.63460661282178,1.85115396664481,3.83918850963421,4.41249676534833,4.25262622362908,3.42861991859682,2.44615848229357,3.04361001780095,6.16887780007865,4.77626968699632,2.76468729680296,4.17808591286417,4.48417400373976,3.59527763461689,4.75503709724327,2.78797782556114,3.22435431620239,4.56994050438915,5.63538678365402,6.10953983535943,5.81857461502877,5.82127305089644,6.76630947229553,5.46157547524528,6.12295038581362,4.44229790118482,3.26097889795864,1.16791574001266,0.982794975566015,1.34917267430912,1.21716072833102,1.20588579876208,2.80088436959562,2.01387296215567,2.91843408195064,2.19649130550465,5.75072826109418,2.97712758134803,3.43241440426017,4.54641980304801,2.87035861635059,3.37710464954357,2.03228509183265,2.84237117655727,4.72598431681875,5.60158783058121,3.28566347603903,4.85768146581266,2.85652369063216,3.51240566144038,2.52216230569906,1.99318220683897,2.39182152986231,2.13022309130459,1.89953480052485,1.3018415272336,1.50791283939272,2.17562273527484,0.983528546038072,3.31124095565679,15.0917554588524,11.9555920324047,5.57378814280696,1.76729649043061,4.10160685241134,2.34263246577983,2.58508077279359,2.62865677747807,2.45078541490634,3.67999490025482,4.45291771842384,4.09158201075837,1.18586333383957,12.8528526568723,5.10984306749767,3.73937767701236,4.88660878060728,6.76377504187395,1.32745138339963,3.39892890616974,3.93020624054176,2.45186603682668,2.65771703592696,3.68922177532713,4.9101375701962,4.72593848320757,4.9909632973861,3.79244109522979,2.10837217149998,5.15677716240934,5.10659408630682,2.52085531643834,2.58717367565509,4.92975180572662,3.72414490648775,4.10248280484762,4.27827453565514,1.8267896946876,0.938686832254841,4.02480934641258,6.17479514553893,8.73897140589844,5.9741837877485,5.91066664295927,5.49112782414428,5.41664969158702,3.78925087618806,13.7214723487777,0,3.09580301944834,0.740778109478847,0.565105371014073,0.27338845544205,0,1.69978429993855,2.79902904647316,2.76399947608848,4.77335309007557,3.63786392618306,4.87966721104437,4.21220829205025,3.3454127362315,5.02233896616208,3.77620169877498,4.71124697634415,3.66458318777641,5.18459893167171,5.59205381778233,1.12738587736838,3.73791365109947,3.64008679005615,4.4723773319131,3.87479470433193,4.89972763923257,3.87278887530988,4.81756223922615,4.29923312145414,1.44950472495604,0.576060012515731,2.21207784439725,3.64905387522296,1.54066435747241,1.81889152168913,1.25318686967237,0.596044064343795,1.08175904567972,2.06765338044408,0.807731599585181,0.533447646584999,1.00826185136841,1.07203668813728,0.577271049841977,0.584384510907845,4.98806843953465,0.665957860122194,0.62799699626633,1.67884616364078,3.86379188064381,3.19060208267009,5.86085197655248,5.78794623513478,3.51100472824754,19.7663144915973,27.6195141904306,28.0718801585304,19.4194096048367,17.1270629942661,18.1294535373528,16.8755625057951,21.6154177547626,28.0948293570207,20.192652158321,2.49089634202024,2.79317411380722,4.26834014385335,4.37592090722929,6.28839487883947,5.88299227040045,6.00066165064361,4.53277125925567,3.85103051510178,5.81203587056734,5.57654459758527,7.1678009726709,6.9294715527713,7.2988673741551,5.91585330242817,3.81034953026459,7.64836551236046,6.17309505483856,3.70877310722976,6.62395140604788,6.51451579532289,6.56660482789549,8.82213902805088,7.41266724824875,7.24642229198046,6.26148098398406,5.12198324043763,5.5244639401947,7.33342214767654,5.05028044491965,5.93175090620871,6.2057823896605,6.95692773388472,6.50734732981057,5.20847849649082,8.74337022782811,5.38042699424439,5.58664740525576,3.82576664137687,5.07360263974886,5.33296021926969
|short_description=p1@Stau2
|short_description=p1@Stau2
}}
}}

Latest revision as of 16:32, 26 September 2015

Short description:p1@Stau2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Stau2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000054668, ENSMUST00000115359, ENSMUST00000116646, ENSMUST00000127420, ENSMUST00000128957, ENSMUST00000159558, ENSMUST00000162007, ENSMUST00000162627_5end
EntrezGene:Stau2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Stau2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.52
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D75.49
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H17.09
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A416.18
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F115.08
cortex, adult.CNhs10473.12-14D528.16
cortex, neonate N30.CNhs11107.1392-42F217.90
diencephalon, adult.CNhs10482.20-12F216.21
diencephalon, neonate N30.CNhs11201.1388-42B217.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.36
epididymis, adult.CNhs10490.58-23B214.66
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C65.40
heart, embryo E17.CNhs11025.479-18E54.65
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E35.72
heart, neonate N03.CNhs11221.1349-25I26.42
heart, neonate N10.CNhs11118.749-24G16.40
heart, neonate N16.CNhs11209.782-15G14.78
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E822.29
hippocampus, neonate N00.CNhs11228.627-43G111.32
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F84.57
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G75.82
kidney, neonate N10.CNhs11206.758-6D56.77
kidney, neonate N20.CNhs11113.832-19I15.46
kidney, neonate N25.CNhs11122.1353-25F36.12
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.86
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C215.09
medulla oblongata, neonate N30.CNhs11200.1396-42A311.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I75.11
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G66.76
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G45.97
skin, neonate N03.CNhs11215.662-22H35.91
skin, neonate N06.CNhs11097.693-20I55.49
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C913.72
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A94.71
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I15.18
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I44.82
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.09
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.19
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.25
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B45.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.82e-1354
neural tube1.72e-1252
neural rod1.72e-1252
future spinal cord1.72e-1252
neural keel1.72e-1252
structure with developmental contribution from neural crest6.96e-1292
gray matter1.25e-1134
ecto-epithelium1.34e-1173
neurectoderm2.35e-1164
neural plate2.35e-1164
presumptive neural plate2.35e-1164
brain4.09e-1047
future brain4.09e-1047
ectoderm-derived structure6.12e-1095
ectoderm6.12e-1095
presumptive ectoderm6.12e-1095
central nervous system6.93e-1073
regional part of brain1.28e-0946
anterior neural tube2.49e-0940
brain grey matter3.70e-0929
regional part of telencephalon3.70e-0929
telencephalon3.70e-0929
nervous system4.38e-0975
pre-chordal neural plate6.23e-0949
regional part of forebrain8.14e-0939
forebrain8.14e-0939
future forebrain8.14e-0939
occipital lobe4.92e-0810
visual cortex4.92e-0810
neocortex4.92e-0810
anatomical conduit3.90e-07122
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