Personal tools

FFCP PHASE1:Mm9::chr2:37298793..37298859,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=227800
|EntrezGene=227800
|HGNC=
|HGNC=
|MCL_coexpression_id=473
|TSSclassifier=NA
|UniProt=A2AWA9,A2AWA7,B2RRC5
|UniProt=A2AWA9,A2AWA7,B2RRC5
|association_with_transcript=0bp_to_ENSMUST00000061179,ENSMUST00000133434,ENSMUST00000153145,NM_146121,uc008jmw.1,uc008jmx.1_5end
|association_with_transcript=0bp_to_ENSMUST00000061179,ENSMUST00000133434,ENSMUST00000153145,NM_146121,uc008jmw.1,uc008jmx.1_5end
|cluster_id=chr2:37298793..37298859,+
|description=CAGE_peak_1_at_Rabgap1_5end
|description=CAGE_peak_1_at_Rabgap1_5end
|id=chr2:37298793..37298859,+
|id=chr2:37298793..37298859,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.33e-09!102;UBERON:0000924!1.33e-09!102;UBERON:0006601!1.33e-09!102;UBERON:0002346!3.56e-08!71;UBERON:0003075!3.56e-08!71;UBERON:0007284!3.56e-08!71;UBERON:0000468!3.56e-08!333;UBERON:0000033!2.35e-07!63;UBERON:0000153!4.50e-07!94;UBERON:0003056!4.83e-07!49
|ontology_enrichment_uberon=UBERON:0004121!1.33e-09!102;UBERON:0000924!1.33e-09!102;UBERON:0006601!1.33e-09!102;UBERON:0002346!3.56e-08!71;UBERON:0003075!3.56e-08!71;UBERON:0007284!3.56e-08!71;UBERON:0000468!3.56e-08!333;UBERON:0000033!2.35e-07!63;UBERON:0000153!4.50e-07!94;UBERON:0003056!4.83e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.24e-09,95;UBERON:0000924,5.24e-09,95;UBERON:0006601,5.24e-09,95;UBERON:0010371,7.53e-09,73;UBERON:0002346,1.08e-07,64;UBERON:0003075,1.08e-07,64;UBERON:0007284,1.08e-07,64;UBERON:0003056,4.83e-07,49
|phase1_expression=23.3817316772999,12.2141392673776,11.8299802241279,15.4256747766483,9.5170188689806,14.2697381125106,10.7461814673942,15.8821687833139,8.58811205125167,6.55380673701582,9.07455231595176,9.25357044345902,16.9488722631894,13.3753215701066,6.66219523631325,8.50396123037269,7.69518065940961,19.2431920868525,25.7775135178789,24.6145998042858,16.5834415794586,20.0567721425788,21.4183827093927,11.9994317095055,12.8469197397615,8.6134794617253,6.03066794622705,12.7128027284675,9.69119439227507,8.06496415231778,8.64748991555688,9.52546010189447,8.61090702618398,0,17.6199488048278,10.140313366868,15.1085323634153,10.4632907684227,8.5946887897618,13.088093599345,11.1763982725893,16.3930916390027,12.1377588257788,24.9275699591643,23.9249557678054,21.8420635072401,2.34717403304412,4.36050312760893,3.73466510648602,8.1660557611199,6.43937539476668,2.87505128729943,11.5769998179838,10.1550699881588,9.41062637598899,15.1783067261209,15.7593391966316,16.5015069528782,19.624696703381,20.1016572123373,17.747279298173,7.45457970552091,3.55717918444456,4.49949858640699,2.96659908770092,2.1314403448383,5.39280198933128,4.2264013585371,18.664130215526,14.7156472781543,14.0917724105426,7.14127461009509,11.4851641294839,17.1487118900936,19.9358579717932,17.4651569455904,16.5173821499083,22.0899094887375,24.1162257212302,18.0684214190366,22.2314973953855,12.5019208933622,15.355064945076,22.5105044012672,25.3645091309505,24.4541725943144,23.6336990126511,21.2495368240843,14.6151553133045,17.7593166250946,28.6965843814661,6.88339101585109,7.47968467078526,6.47643829965381,9.09686984426737,10.3046184032387,9.97155382935438,15.3387290320252,13.2490862347463,14.4869225549239,19.858922188512,19.2489716121477,10.1922095882658,7.11066703153331,16.4533191168523,13.9347926011304,13.1436355703844,12.3318590096585,30.0367945030719,19.5943623565569,18.3894446372104,19.485790611977,12.9144678463393,25.6228488939458,26.9278139340764,15.9596570988688,20.517182321953,17.930320258069,9.73071607144862,19.0884882937943,13.9130156630048,11.1521308221101,16.775258509631,21.958559775866,30.369772487951,11.240110429178,8.14742846640258,10.7982491578813,9.27612657633372,29.0593840445356,16.9275223042892,15.0785222535437,25.2045264278801,29.9187085076487,22.4411088124325,22.064811777215,20.4697121339136,17.2925689148029,17.1851475734899,19.1502088856691,21.7301139747715,16.3230494147766,19.086585759367,25.6198190320716,26.6022711681692,28.0569047423821,26.3301846012838,26.1290404446406,18.7544153851573,29.6896545863476,22.6976950171494,21.9195732427575,30.5851974148158,25.4224081561182,28.1921526878883,25.4763861527671,3.51106593656617,4.63226232806487,6.53576048609863,14.9130556225561,21.1073453982987,19.4467026377896,20.5967919959133,15.7411385397923,19.2833891109223,15.3472403535269,13.1453966685813,14.7124331382634,13.6584675428189,15.1034066952768,15.0787985755292,11.9883989688773,16.4662586468288,17.0442151825672,24.814213930567,23.6680608472354,12.2254949704005,13.4869788998408,28.3673373211861,24.6170872172065,18.2991795077373,17.3447831176075,13.5650606745371,17.3105319762429,9.96511029243474,13.8347121968169,16.8394589896181,14.9217354030863,14.622306533934,9.88701349519644,14.6973873914792,18.1218558661474,14.6044283733873,21.2502233454096,21.4144697778853,27.0856266034268,22.6924409986122,23.2149563836954,23.6504648844722,19.7797598292667,16.9558626068685,14.9310568345379,12.7474629647474,9.84386123724955,10.4176267409998,11.9176919563972,10.7515864335907,11.576503668116,10.9489116266011,11.7955416354832,14.2678999562031,10.9824565275233,15.814502718009,18.2349064357567,14.6657706363843,14.9021537988796,10.0462551572271,14.9557491622644,19.0295785871603,17.0542270593436,25.5855013013981,22.9155865796504,20.4180516010997,25.2934448737142,26.4228441383475,21.4647012643579,23.8029067600348,22.589398344175,26.9478559031153,22.9408640602033,22.1036776788346,22.1313059629713,10.5553898757491,11.4220193601929,10.8188140064188,15.7283945393698,22.3165320083031,23.3251256318484,15.2459499200308,15.1482556322624,24.609641114468,18.350620981942,24.7736907392719,23.6579109973027,28.5182302825464,20.9476632783736,27.5271277138928,30.9791209385991,28.8560077900962,21.2072068838393,21.2910127812403,17.8065603667255,27.0392352526936,19.6314446337317,9.2921596837974,18.2085477116236,14.2092071773433,12.4479352638893,10.335566250827,15.6791925451403,14.4719844174204,21.8120237686503,16.3988794056972,18.0140952023415,16.8669773719998,11.3449097573006,27.5756080660568,23.0478200360077,12.0303575917962,19.0759961178117,25.1823131772028,24.0797903762795,21.8850197400821,14.0053876592716,11.2642419870581,19.0648863777438,15.6575162619023,16.818397800031,32.454349765877,25.6933060193944,24.1132134886336,23.9645713627789,11.3677526285642,22.9927374493032,8.03093139749908,17.3364969089107,21.1121761201471,14.5043711893612,14.2161996829866,15.328137604837,11.728511669576,8.95689294871411,10.6413979829406,4.77335309007557,19.6128316020304,26.4315307264903,23.3291536175091,20.072476417389,18.3424553546789,18.2066867619508,18.7623344496513,15.1818446350737,13.6095721956383,14.2908042009993,8.45539408026285,25.4178128274764,20.6823113071372,23.9174961663179,20.4072521094815,28.5535852079415,26.1706642180031,23.9576068112868,24.641945940042,21.9841549951666,19.5860404255349,12.6404448251271,13.3798642091508,16.8445969750317,18.4487568628469,19.692936523423,19.6694541233452,16.4667765842357,16.2458479892035,20.6981222393703,17.37515191734,21.3751512490102,21.245818001266,20.3969104277498,24.3103956537663,14.5107445513735,12.8751852956958,19.0193376012088,28.0367309328011,19.8985281853156,12.9500908061316,21.2455884150028,13.2908395029021,13.0408747049194,26.5433366030021,24.3972375348804,25.2074025913335,24.0594455281163,23.2928056722018,24.9279986138601,24.300810008345,20.7147753483141,24.9228324941313,25.3702552758392,18.2665731748151,21.9463680370567,19.122163844463,18.2330037801221,11.1094976192831,8.45680138870065,16.8907513129228,15.0405591784393,14.1204452220399,17.436107611702,15.9691958930851,19.0512604799937,22.0057542554224,18.5032690450072,20.7342042929764,16.6702791949076,18.3097234992872,18.1334667235883,17.3076078337389,19.8718542181436,15.0862471049583,17.0376773912964,17.8827142460491,17.8776092457764,16.3750321922675,19.3767452071939,16.2805895856768,16.3103221091463,16.9755142307327,17.3954104213899,17.0834426098811,15.8592216624657,21.2800142448238,19.2121683070598,18.5190346541896,16.9871192997803,18.9484602840781,19.9830080264917,17.5985265503336,21.397367654593,15.0714093153274
|phase1_expression=23.3817316772999,12.2141392673776,11.8299802241279,15.4256747766483,9.5170188689806,14.2697381125106,10.7461814673942,15.8821687833139,8.58811205125167,6.55380673701582,9.07455231595176,9.25357044345902,16.9488722631894,13.3753215701066,6.66219523631325,8.50396123037269,7.69518065940961,19.2431920868525,25.7775135178789,24.6145998042858,16.5834415794586,20.0567721425788,21.4183827093927,11.9994317095055,12.8469197397615,8.6134794617253,6.03066794622705,12.7128027284675,9.69119439227507,8.06496415231778,8.64748991555688,9.52546010189447,8.61090702618398,0,17.6199488048278,10.140313366868,15.1085323634153,10.4632907684227,8.5946887897618,13.088093599345,11.1763982725893,16.3930916390027,12.1377588257788,24.9275699591643,23.9249557678054,21.8420635072401,2.34717403304412,4.36050312760893,3.73466510648602,8.1660557611199,6.43937539476668,2.87505128729943,11.5769998179838,10.1550699881588,9.41062637598899,15.1783067261209,15.7593391966316,16.5015069528782,19.624696703381,20.1016572123373,17.747279298173,7.45457970552091,3.55717918444456,4.49949858640699,2.96659908770092,2.1314403448383,5.39280198933128,4.2264013585371,18.664130215526,14.7156472781543,14.0917724105426,7.14127461009509,11.4851641294839,17.1487118900936,19.9358579717932,17.4651569455904,16.5173821499083,22.0899094887375,24.1162257212302,18.0684214190366,22.2314973953855,12.5019208933622,15.355064945076,22.5105044012672,25.3645091309505,24.4541725943144,23.6336990126511,21.2495368240843,14.6151553133045,17.7593166250946,28.6965843814661,6.88339101585109,7.47968467078526,6.47643829965381,9.09686984426737,10.3046184032387,9.97155382935438,15.3387290320252,13.2490862347463,14.4869225549239,19.858922188512,19.2489716121477,10.1922095882658,7.11066703153331,16.4533191168523,13.9347926011304,13.1436355703844,12.3318590096585,30.0367945030719,19.5943623565569,18.3894446372104,19.485790611977,12.9144678463393,25.6228488939458,26.9278139340764,15.9596570988688,20.517182321953,17.930320258069,9.73071607144862,19.0884882937943,13.9130156630048,11.1521308221101,16.775258509631,21.958559775866,30.369772487951,11.240110429178,8.14742846640258,10.7982491578813,9.27612657633372,29.0593840445356,16.9275223042892,15.0785222535437,25.2045264278801,29.9187085076487,22.4411088124325,22.064811777215,20.4697121339136,17.2925689148029,17.1851475734899,19.1502088856691,21.7301139747715,16.3230494147766,19.086585759367,25.6198190320716,26.6022711681692,28.0569047423821,26.3301846012838,26.1290404446406,18.7544153851573,29.6896545863476,22.6976950171494,21.9195732427575,30.5851974148158,25.4224081561182,28.1921526878883,25.4763861527671,3.51106593656617,4.63226232806487,6.53576048609863,14.9130556225561,21.1073453982987,19.4467026377896,20.5967919959133,15.7411385397923,19.2833891109223,15.3472403535269,13.1453966685813,14.7124331382634,13.6584675428189,15.1034066952768,15.0787985755292,11.9883989688773,16.4662586468288,17.0442151825672,24.814213930567,23.6680608472354,12.2254949704005,13.4869788998408,28.3673373211861,24.6170872172065,18.2991795077373,17.3447831176075,13.5650606745371,17.3105319762429,9.96511029243474,13.8347121968169,16.8394589896181,14.9217354030863,14.622306533934,9.88701349519644,14.6973873914792,18.1218558661474,14.6044283733873,21.2502233454096,21.4144697778853,27.0856266034268,22.6924409986122,23.2149563836954,23.6504648844722,19.7797598292667,16.9558626068685,14.9310568345379,12.7474629647474,9.84386123724955,10.4176267409998,11.9176919563972,10.7515864335907,11.576503668116,10.9489116266011,11.7955416354832,14.2678999562031,10.9824565275233,15.814502718009,18.2349064357567,14.6657706363843,14.9021537988796,10.0462551572271,14.9557491622644,19.0295785871603,17.0542270593436,25.5855013013981,22.9155865796504,20.4180516010997,25.2934448737142,26.4228441383475,21.4647012643579,23.8029067600348,22.589398344175,26.9478559031153,22.9408640602033,22.1036776788346,22.1313059629713,10.5553898757491,11.4220193601929,10.8188140064188,15.7283945393698,22.3165320083031,23.3251256318484,15.2459499200308,15.1482556322624,24.609641114468,18.350620981942,24.7736907392719,23.6579109973027,28.5182302825464,20.9476632783736,27.5271277138928,30.9791209385991,28.8560077900962,21.2072068838393,21.2910127812403,17.8065603667255,27.0392352526936,19.6314446337317,9.2921596837974,18.2085477116236,14.2092071773433,12.4479352638893,10.335566250827,15.6791925451403,14.4719844174204,21.8120237686503,16.3988794056972,18.0140952023415,16.8669773719998,11.3449097573006,27.5756080660568,23.0478200360077,12.0303575917962,19.0759961178117,25.1823131772028,24.0797903762795,21.8850197400821,14.0053876592716,11.2642419870581,19.0648863777438,15.6575162619023,16.818397800031,32.454349765877,25.6933060193944,24.1132134886336,23.9645713627789,11.3677526285642,22.9927374493032,8.03093139749908,17.3364969089107,21.1121761201471,14.5043711893612,14.2161996829866,15.328137604837,11.728511669576,8.95689294871411,10.6413979829406,4.77335309007557,19.6128316020304,26.4315307264903,23.3291536175091,20.072476417389,18.3424553546789,18.2066867619508,18.7623344496513,15.1818446350737,13.6095721956383,14.2908042009993,8.45539408026285,25.4178128274764,20.6823113071372,23.9174961663179,20.4072521094815,28.5535852079415,26.1706642180031,23.9576068112868,24.641945940042,21.9841549951666,19.5860404255349,12.6404448251271,13.3798642091508,16.8445969750317,18.4487568628469,19.692936523423,19.6694541233452,16.4667765842357,16.2458479892035,20.6981222393703,17.37515191734,21.3751512490102,21.245818001266,20.3969104277498,24.3103956537663,14.5107445513735,12.8751852956958,19.0193376012088,28.0367309328011,19.8985281853156,12.9500908061316,21.2455884150028,13.2908395029021,13.0408747049194,26.5433366030021,24.3972375348804,25.2074025913335,24.0594455281163,23.2928056722018,24.9279986138601,24.300810008345,20.7147753483141,24.9228324941313,25.3702552758392,18.2665731748151,21.9463680370567,19.122163844463,18.2330037801221,11.1094976192831,8.45680138870065,16.8907513129228,15.0405591784393,14.1204452220399,17.436107611702,15.9691958930851,19.0512604799937,22.0057542554224,18.5032690450072,20.7342042929764,16.6702791949076,18.3097234992872,18.1334667235883,17.3076078337389,19.8718542181436,15.0862471049583,17.0376773912964,17.8827142460491,17.8776092457764,16.3750321922675,19.3767452071939,16.2805895856768,16.3103221091463,16.9755142307327,17.3954104213899,17.0834426098811,15.8592216624657,21.2800142448238,19.2121683070598,18.5190346541896,16.9871192997803,18.9484602840781,19.9830080264917,17.5985265503336,21.397367654593,15.0714093153274
|short_description=p1@Rabgap1
|short_description=p1@Rabgap1
}}
}}

Latest revision as of 16:24, 26 September 2015

Short description:p1@Rabgap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rabgap1_5end
Coexpression cluster:MCL_coexpression_mm9:473
Association with transcript: 0bp_to_ENSMUST00000061179, ENSMUST00000133434, ENSMUST00000153145, NM_146121, uc008jmw.1, uc008jmx.1_5end
EntrezGene:Rabgap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rabgap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.43
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.27
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.25
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E416.95
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.24
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.42
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.85
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I212.71
Ileum epithelium, pool1.CNhs13199.10252-104B99.69
Ileum epithelium, pool2.CNhs13232.10253-104C18.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.92
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.18
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C516.50
Mouse Granule cells, donor1.CNhs12131.11713-123C319.62
Mouse Granule cells, donor2.CNhs12357.11731-123E320.10
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.09
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E522.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.25
Mouse Schwann, donor1.CNhs12507.11728-123D914.62
Mouse Schwann, donor2.CNhs12573.11746-123F917.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.45
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.33
accessory axillary lymph node, adult.CNhs10475.1063-29H930.04
adrenal gland, adult.CNhs10508.49-24D719.59
adrenal gland, embryo E14.CNhs11038.406-44C518.39
adrenal gland, embryo E16.CNhs11004.1254-43D619.49
adrenal gland, embryo E17.CNhs11043.1263-45I112.91
adrenal gland, embryo E18.CNhs11026.1262-18F525.62
adrenal gland, neonate N00.CNhs11191.1311-23C126.93
adrenal gland, neonate N25.CNhs11223.1377-27I315.96
amnion, adult pregnant day17.5.CNhs10488.583-22A820.52
aorta, adult.CNhs10498.46-23H117.93
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F519.09
bone (os femoris), neonate N16.CNhs11225.1525-43A613.91
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B221.96
cerebellum, neonate N30.CNhs11135.1395-42I230.37
colon, adult.CNhs10468.36-18H711.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.15
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.28
corpora quadrigemina, adult.CNhs10501.16-22A429.06
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F115.08
cortex, adult.CNhs10473.12-14D525.20
cortex, neonate N30.CNhs11107.1392-42F229.92
diencephalon, adult.CNhs10482.20-12F222.44
diencephalon, neonate N30.CNhs11201.1388-42B222.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.29
epididymis, adult.CNhs10490.58-23B217.19
eyeball, adult.CNhs10484.31-12G419.15
eyeball, embryo E12.CNhs11016.345-16C621.73
eyeball, embryo E14.CNhs10521.399-16E216.32
eyeball, embryo E15.CNhs10593.426-16C919.09
eyeball, embryo E17.CNhs11023.1261-18D425.62
eyeball, neonate N00.CNhs11207.633-15C626.60
eyeball, neonate N01.CNhs11140.1532-43E728.06
eyeball, neonate N02.CNhs11205.1551-44G826.33
eyeball, neonate N16.CNhs11188.777-19A226.13
forelimb, embryo E11.CNhs10596.335-25E218.75
forelimb, embryo E12.CNhs10600.359-14H229.69
forelimb, embryo E13.CNhs10589.384-1E222.70
forelimb, embryo E14.CNhs10577.413-26A821.92
forelimb, embryo E15.CNhs11007.437-20E730.59
forelimb, embryo E17.CNhs10598.1517-43C425.42
forelimb, embryo E18.CNhs11008.1520-43B528.19
gonad, embryo E13.CNhs11044.1564-45I625.48
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.54
heart, embryo E11.CNhs10586.331-24E914.91
heart, embryo E12.CNhs11015.353-12F521.11
heart, embryo E13.CNhs11013.376-3I919.45
heart, embryo E14.CNhs10597.403-26D420.60
heart, embryo E15.CNhs11017.431-16C815.74
heart, embryo E16.CNhs11021.457-17C619.28
heart, embryo E17.CNhs11025.479-18E515.35
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E314.71
heart, neonate N03.CNhs11221.1349-25I213.66
heart, neonate N10.CNhs11118.749-24G115.10
heart, neonate N16.CNhs11209.782-15G115.08
heart, neonate N20.CNhs11127.821-26I611.99
heart, neonate N25.CNhs11196.1351-25D316.47
heart, neonate N30.CNhs11202.1390-42D217.04
hippocampus, adult.CNhs10478.13-16E824.81
hippocampus, neonate N00.CNhs11228.627-43G123.67
intestinal mucosa, adult.CNhs10506.860-29I312.23
intestine, adult.CNhs10496.178-9A313.49
intestine, embryo E12.CNhs11019.1251-16I528.37
intestine, embryo E13.CNhs11010.381-16D524.62
intestine, embryo E15.CNhs10602.976-16D818.30
intestine, embryo E16.CNhs10585.463-22H417.34
intestine, embryo E17.CNhs10582.482-18D313.57
intestine, embryo E18.CNhs10526.1289-20F717.31
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E913.83
intestine, neonate N06.CNhs11102.688-20B816.84
intestine, neonate N07.CNhs11095.720-20F214.92
intestine, neonate N10.CNhs11098.755-23A514.62
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E314.70
intestine, neonate N30.CNhs11131.1384-42G118.12
kidney, embryo E14.CNhs10606.411-4I914.60
kidney, embryo E15.CNhs10997.434-16F821.25
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I227.09
kidney, embryo E18.CNhs11001.1288-20C722.69
kidney, neonate N00.CNhs11214.646-21G723.21
kidney, neonate N10.CNhs11206.758-6D523.65
kidney, neonate N20.CNhs11113.832-19I119.78
kidney, neonate N25.CNhs11122.1353-25F316.96
kidney, neonate N30.CNhs11203.1385-42H114.93
liver, adult pregnant day01.CNhs10466.508-5B212.75
liver, embryo E12.CNhs10601.355-15F89.84
liver, embryo E13.CNhs10524.378-3H610.42
liver, embryo E14.CNhs10594.409-16E111.92
liver, embryo E15.CNhs10520.433-16D710.75
liver, embryo E16.CNhs10523.462-17F511.58
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G411.80
liver, neonate N00.CNhs11117.641-24F414.27
liver, neonate N03.CNhs11123.1345-25G210.98
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H218.23
liver, neonate N10.CNhs11115.751-24B914.67
liver, neonate N20.CNhs11220.823-25A314.90
liver, neonate N25.CNhs11198.1368-26H110.05
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B119.03
lung, embryo E12.CNhs10522.354-16G217.05
lung, embryo E14.CNhs10604.404-26F825.59
lung, embryo E15.CNhs11020.432-17C522.92
lung, embryo E16.CNhs10998.458-17B620.42
lung, embryo E17.CNhs10605.480-44A625.29
lung, embryo E18.CNhs10583.1287-20I626.42
lung, neonate N00.CNhs11224.640-42C621.46
lung, neonate N06.CNhs11212.683-20E523.80
lung, neonate N07.CNhs11111.715-19A322.59
lung, neonate N10.CNhs11219.750-23E626.95
lung, neonate N20.CNhs11109.822-18A422.94
lung, neonate N25.CNhs11119.1359-25C722.10
lung, neonate N30.CNhs11133.1394-42H222.13
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H215.73
medulla oblongata, adult.CNhs10477.17-12C222.32
medulla oblongata, neonate N30.CNhs11200.1396-42A323.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.15
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E124.61
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.66
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D828.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D427.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.86
olfactory brain, adult.CNhs10489.18-22I921.21
ovary, adult.CNhs10507.91-2I721.29
ovary, embryo E18.CNhs11040.505-44H717.81
ovary, neonate N00.CNhs11217.1299-22I427.04
oviduct, adult pregnant day01.CNhs10500.988-6G619.63
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F418.21
pancreas, embryo E15.CNhs11042.1556-45F214.21
pancreas, embryo E16.CNhs11003.460-26E512.45
pancreas, embryo E17.CNhs10599.1558-45G310.34
pancreas, embryo E18.CNhs10580.1535-43I715.68
pancreas, neonate N00.CNhs11105.645-26G914.47
pancreas, neonate N01.CNhs11138.1531-43D721.81
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B618.01
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G827.58
pituitary gland, embryo E12.CNhs11018.346-16E623.05
pituitary gland, embryo E13.CNhs11009.370-44C712.03
pituitary gland, embryo E14.CNhs11037.398-44A519.08
pituitary gland, embryo E15.CNhs10592.427-16B925.18
pituitary gland, embryo E16.CNhs11036.449-43F624.08
pituitary gland, embryo E17.CNhs11039.1265-44F521.89
pituitary gland, neonate N00.CNhs11190.1308-22E914.01
placenta, adult pregnant day10.CNhs10472.539-13I711.26
placenta, adult pregnant day17.CNhs10464.577-18G319.06
prostate, adult.CNhs10470.859-1F815.66
skin, adult.CNhs10492.30-1C316.82
skin, neonate N00.CNhs11124.650-25G432.45
skin, neonate N03.CNhs11215.662-22H325.69
skin, neonate N06.CNhs11097.693-20I524.11
skin, neonate N10.CNhs11108.762-6C423.96
small intestine, neonate N16.CNhs11114.790-21I111.37
spinal cord, adult.CNhs10505.24-13C922.99
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C117.34
spleen, embryo E18.CNhs11011.1271-21F221.11
spleen, neonate N10.CNhs11116.752-24D114.50
spleen, neonate N20.CNhs11112.824-19H114.22
spleen, neonate N25.CNhs11099.1354-25G315.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.64
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E319.61
stomach, embryo E15.CNhs10603.1252-16G826.43
stomach, embryo E16.CNhs11022.459-17D423.33
stomach, embryo E17.CNhs11006.1035-18D520.07
stomach, embryo E18.CNhs10999.1286-20C618.34
stomach, neonate N03.CNhs11193.1340-24B818.21
stomach, neonate N07.CNhs11210.718-18A918.76
stomach, neonate N25.CNhs11104.1355-25E415.18
stomach, neonate N30.CNhs11134.1386-42I113.61
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F525.42
testis, embryo E15.CNhs11034.443-27C520.68
testis, embryo E16.CNhs11033.470-26G523.92
testis, embryo E17.CNhs11029.486-18I520.41
testis, embryo E18.CNhs11027.503-18G528.55
testis, neonate N00.CNhs11189.1300-22B726.17
testis, neonate N07.CNhs11222.726-26I423.96
testis, neonate N10.CNhs11204.763-44D924.64
testis, neonate N20.CNhs11110.839-18H321.98
testis, neonate N30.CNhs11130.1391-42E219.59
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I413.38
thymus, embryo E15.CNhs11005.430-45I216.84
thymus, embryo E16.CNhs11002.456-26C518.45
thymus, embryo E17.CNhs10581.478-18C119.69
thymus, embryo E18.CNhs10595.1273-19G419.67
thymus, neonate N02.CNhs11181.1541-43F816.47
thymus, neonate N03.CNhs11137.2104-43C716.25
thymus, neonate N06.CNhs11197.681-26C420.70
thymus, neonate N07.CNhs11211.713-19D317.38
thymus, neonate N10.CNhs11194.748-24E421.38
thymus, neonate N20.CNhs11186.820-7A221.25
thymus, neonate N25.CNhs11125.1362-25G720.40
thymus, neonate N30.CNhs11132.1393-42G224.31
tongue, adult.CNhs10499.32-1B414.51
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F719.02
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G528.04
urinary bladder, adult.CNhs10481.879-12E419.90
uterus, adult pregnant day19.CNhs10497.590-15F512.95
uterus, adult.CNhs10509.92-27E521.25
vagina, adult.CNhs10502.89-27D513.29
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A126.54
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I818.27
whole body, embryo E12.CNhs10587.857-27C921.95
whole body, embryo E13.CNhs10512.372-23H219.12
whole body, embryo E14.5.CNhs10578.420-27D218.23
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.01
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.73
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.87
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.04
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.21
whole body, embryo E17.5.CNhs10513.490-9F918.52
whole body, embryo E17.CNhs10517.475-3I516.99
whole body, embryo E18.CNhs10516.493-3B318.95
whole body, neonate N00.CNhs10525.657-19C219.98
whole body, neonate N01.CNhs10576.659-23C617.60
whole body, neonate N06.CNhs10515.692-21D121.40
whole body, neonate N10.CNhs10518.761-6B415.07





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure5.24e-0995
ectoderm5.24e-0995
presumptive ectoderm5.24e-0995
ecto-epithelium7.53e-0973
neurectoderm1.08e-0764
neural plate1.08e-0764
presumptive neural plate1.08e-0764
pre-chordal neural plate4.83e-0749
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:37298793..37298859,%2B&oldid=4262641"