FFCP PHASE1:Mm9::chr6:124706844..124706865,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13498 | |EntrezGene=13498 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O35126 | |UniProt=O35126 | ||
|association_with_transcript=-302bp_to_ENSMUST00000088357_5end | |association_with_transcript=-302bp_to_ENSMUST00000088357_5end | ||
|cluster_id=chr6:124706844..124706865,- | |||
|description=CAGE_peak_2_at_Atn1_5end | |description=CAGE_peak_2_at_Atn1_5end | ||
|id=chr6:124706844..124706865,- | |id=chr6:124706844..124706865,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.13e-10!102;UBERON:0000924!6.13e-10!102;UBERON:0006601!6.13e-10!102;UBERON:0002346!7.00e-09!71;UBERON:0003075!7.00e-09!71;UBERON:0007284!7.00e-09!71;UBERON:0001017!1.53e-08!73;UBERON:0005743!1.53e-08!73;UBERON:0000073!5.15e-08!75;UBERON:0001016!5.15e-08!75;UBERON:0001049!5.38e-08!52;UBERON:0005068!5.38e-08!52;UBERON:0006241!5.38e-08!52;UBERON:0007135!5.38e-08!52;UBERON:0000033!5.44e-08!63;UBERON:0003056!9.23e-08!49;UBERON:0000955!3.83e-07!50;UBERON:0006238!3.83e-07!50;UBERON:0003080!6.00e-07!40;UBERON:0002780!7.49e-07!39;UBERON:0001890!7.49e-07!39;UBERON:0006240!7.49e-07!39;UBERON:0002616!8.19e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.20e-09,95;UBERON:0000924,2.20e-09,95;UBERON:0006601,2.20e-09,95;UBERON:0010371,2.63e-09,73;UBERON:0001017,1.26e-08,73;UBERON:0002346,2.19e-08,64;UBERON:0003075,2.19e-08,64;UBERON:0007284,2.19e-08,64;UBERON:0001016,4.29e-08,75;UBERON:0010314,5.04e-08,92;UBERON:0001049,5.10e-08,52;UBERON:0005068,5.10e-08,52;UBERON:0006241,5.10e-08,52;UBERON:0007135,5.10e-08,52;UBERON:0000955,6.43e-08,47;UBERON:0006238,6.43e-08,47;UBERON:0003056,8.76e-08,49;UBERON:0002616,1.44e-07,46;UBERON:0000073,2.40e-07,54;UBERON:0003080,5.73e-07,40;UBERON:0002780,7.16e-07,39;UBERON:0001890,7.16e-07,39;UBERON:0006240,7.16e-07,39 | |||
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|phase1_expression=5.92550734287738,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.467225281191051,0.774739940649458,2.39340827657833,3.04283884218592,0.856089841127525,1.03703806693937,1.19840510951844,2.27293046289393,0.333109761815663,0.202475267389826,0,0.157731082679119,0.685572168028694,0,2.21112554392781,1.88652807281682,0,0,0.22940928106717,1.14846392823004,0.430761996159075,0,0.570070258369122,1.00812051903972,0.221730510655305,1.90509202037889,2.46025915033828,0,1.44425809875637,0.332469290716985,0.612508068787107,0.418531630736908,0,1.0470474879476,1.17646297606203,0.683045484958446,0.485510353031154,3.77690453926732,5.37297735463427,4.58866880404204,9.38869613217647,10.4652075062614,8.78744730937887,7.77719596297134,8.11921245427103,8.62515386189829,0.503347818173209,3.62681071005672,2.35265659399725,6.68874533693462,7.16333599846892,3.09403255366465,7.89034197352431,4.23192783417626,1.90149421051854,5.08266798103698,2.66788438833342,1.7997994345628,0,1.4209602298922,8.68840320503374,11.9107674649682,6.42875596312561,7.56033254657468,8.83364837675805,6.56997264128748,4.41737081903227,3.67472397644862,7.28425579738596,6.43453150627015,0,4.21368215681119,5.22262213071228,6.19865552331911,5.85520919055422,4.16730696445408,2.79182999001381,2.25105044012672,4.88954392885792,6.77645746589436,5.55249555116501,5.59198337475902,1.36307147999731,3.17400552448499,1.15945795480671,0,0.679971333707751,0.539703191637817,0,0.448026887097336,1.12355536105401,9.20323741921512,5.45550609666024,6.71345191569646,9.43650912503759,2.56652954828636,5.09610479413291,0,0.649473123033642,1.01343946190039,0,1.7127581957859,1.8125651855302,4.60170631100957,7.11289839741157,6.39377504455497,4.61230994512117,5.57673770044703,7.99603208522793,3.01599819191221,3.46072954828123,4.48258006451726,0.884610551949874,8.7354098971601,3.09178125844551,1.93950101254089,0,4.9772735491963,3.77004072264219,1.02182822083437,0.718890747035522,0,0.381210681219194,5.99162557619291,9.15001205637253,11.9371634507221,8.51739168942155,8.18289463457058,5.194701113989,6.48965052271031,13.5446353920921,4.10543003013307,2.77995034277042,2.94618598241064,8.71806967850115,3.67843367093557,4.50155324513373,8.74087943447147,8.23241639731067,6.91814089538189,6.74652416830048,3.62184719034622,9.91612767491074,14.3720620927543,10.0292140773451,7.45265490253754,12.7901734643775,9.4028084960985,10.4948889568051,13.1362616100206,0,0.772043721344145,0.284163499395593,3.52113813310353,4.45599513964083,3.6012412292203,6.39210786080068,5.1158700254325,6.32495162838251,3.95307706075693,4.02410102099429,2.80236821681207,2.46839774870221,3.77585167381919,2.26992666728396,3.36259971078264,3.07370161407471,2.54992195644706,8.83217783969334,9.36431972651488,0.991256348951394,1.32225283331772,8.31824177087412,8.82499353069666,8.76298736990235,5.04208811558356,4.00280478920767,1.90225626112559,0.474529061544512,2.30578536613615,3.01602250560323,3.18330355265841,3.50935356814416,5.39291645192533,1.08069024937347,0.597423819763102,7.77638393907635,7.31190480702264,9.01661885384643,6.10953983535943,5.23671715352589,7.85521182771568,4.3000845244495,3.39503340353085,1.72698600625512,3.82531208157582,1.48226313543574,2.33583148002532,1.76903095601883,1.12431056192427,2.02860121388503,0.72353147925725,1.52775511068852,1.43848068725405,1.94562272130042,1.09824565275233,11.5014565221884,1.48856379067401,2.80833905803104,1.01031551178845,0.358794827043824,0.482443521363367,3.69506380333209,5.30575952957357,7.82231886921724,9.50572480341054,9.85699042811709,6.365237782789,5.71304738126433,6.63454402716516,5.2019597555043,5.97954662051692,7.01600982092943,1.80249646187312,2.41758974612254,2.60368305446721,0,0.54390568381871,1.96705709207614,3.31124095565679,4.81651769963376,4.45404409050372,13.6066004662641,1.26235463602186,3.47059041357882,2.73307121007647,3.87762115919038,5.4962823529087,4.45597348164788,8.20921939287614,2.02405350837447,4.9683495844923,3.95287777946523,8.35435422696698,6.67118400478862,16.738166744722,13.845391545054,9.89820737835213,0,9.71122544619926,8.16273603804828,3.77210159511796,5.31543407185391,2.15204603560749,4.9101375701962,2.90826983582004,3.20847640546249,1.26414703174326,1.05418608574999,2.06271086496374,4.08527526904546,6.30213829109586,10.3486947026204,9.64516657642165,8.51233121482913,6.77801506887868,9.05019613311665,13.0919928119278,3.05073220482823,1.90648863777438,1.54369878638473,6.76033637060068,6.13564821444441,7.29786391630686,5.252383136138,7.38634048852776,2.04036585640896,5.19190845629427,0.512612642393558,6.81076664278634,3.88908507476395,0.753473828018764,0.683471138605126,0.228778173206523,2.20971958992012,1.95932033253121,2.48759952847963,1.90934123603023,8.22473583310952,7.1161813494397,7.12835249423888,7.73626695253534,5.67742665740062,3.10187996685088,5.86839535649885,1.30877970992015,1.68499465279331,3.10669656543463,0.56369293868419,6.87776111802302,7.61109056102649,11.6670713006429,9.04118764344118,11.6579726588637,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| ||
|short_description=p2@Atn1 | |short_description=p2@Atn1 | ||
}} | }} |
Latest revision as of 16:04, 26 September 2015
Short description: | p2@Atn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atn1_5end |
Coexpression cluster: | NA |
Association with transcript: | -302bp_to_ENSMUST00000088357_5end |
EntrezGene: | Atn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.20e-09 | 95 |
ectoderm | 2.20e-09 | 95 |
presumptive ectoderm | 2.20e-09 | 95 |
ecto-epithelium | 2.63e-09 | 73 |
central nervous system | 1.26e-08 | 73 |
neurectoderm | 2.19e-08 | 64 |
neural plate | 2.19e-08 | 64 |
presumptive neural plate | 2.19e-08 | 64 |
nervous system | 4.29e-08 | 75 |
structure with developmental contribution from neural crest | 5.04e-08 | 92 |
neural tube | 5.10e-08 | 52 |
neural rod | 5.10e-08 | 52 |
future spinal cord | 5.10e-08 | 52 |
neural keel | 5.10e-08 | 52 |
brain | 6.43e-08 | 47 |
future brain | 6.43e-08 | 47 |
pre-chordal neural plate | 8.76e-08 | 49 |
regional part of brain | 1.44e-07 | 46 |
regional part of nervous system | 2.40e-07 | 54 |
anterior neural tube | 5.73e-07 | 40 |
regional part of forebrain | 7.16e-07 | 39 |
forebrain | 7.16e-07 | 39 |
future forebrain | 7.16e-07 | 39 |