FFCP PHASE1:Mm9::chr7:3289262..3289302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50918 | |EntrezGene=50918 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O35682,Q0VE46 | |UniProt=O35682,Q0VE46 | ||
|association_with_transcript=223bp_to_ENSMUST00000164553,NM_001093764,uc009eup.1_5end | |association_with_transcript=223bp_to_ENSMUST00000164553,NM_001093764,uc009eup.1_5end | ||
|cluster_id=chr7:3289262..3289302,+ | |||
|description=CAGE_peak_3_at_Myadm_5end | |description=CAGE_peak_3_at_Myadm_5end | ||
|id=chr7:3289262..3289302,+ | |id=chr7:3289262..3289302,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.89e-13!114;UBERON:0004111!1.43e-12!122;UBERON:0004535!4.53e-12!23;UBERON:0001009!4.53e-12!23;UBERON:0007100!3.75e-10!18;UBERON:0000948!3.75e-10!18;UBERON:0005498!3.75e-10!18;UBERON:0004140!3.75e-10!18;UBERON:0009881!3.75e-10!18;UBERON:0004141!3.75e-10!18;UBERON:0003084!3.75e-10!18;UBERON:0007005!3.75e-10!18;UBERON:0004139!3.75e-10!18;UBERON:0004291!3.75e-10!18;UBERON:0001017!5.51e-09!73;UBERON:0005743!5.51e-09!73;UBERON:0000073!4.71e-08!75;UBERON:0001016!4.71e-08!75;UBERON:0004872!6.69e-08!33;UBERON:0000955!1.08e-07!50;UBERON:0006238!1.08e-07!50;UBERON:0001049!1.84e-07!52;UBERON:0005068!1.84e-07!52;UBERON:0006241!1.84e-07!52;UBERON:0007135!1.84e-07!52;UBERON:0002616!1.92e-07!49;UBERON:0004121!3.16e-07!102;UBERON:0000924!3.16e-07!102;UBERON:0006601!3.16e-07!102;UBERON:0002346!4.84e-07!71;UBERON:0003075!4.84e-07!71;UBERON:0007284!4.84e-07!71;UBERON:0000468!5.12e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.47e-14,92;UBERON:0000025,3.37e-13,114;UBERON:0004111,1.25e-12,122;UBERON:0004535,4.37e-12,23;UBERON:0001009,4.37e-12,23;UBERON:0007100,3.64e-10,18;UBERON:0000948,3.64e-10,18;UBERON:0005498,3.64e-10,18;UBERON:0004140,3.64e-10,18;UBERON:0009881,3.64e-10,18;UBERON:0004141,3.64e-10,18;UBERON:0003084,3.64e-10,18;UBERON:0007005,3.64e-10,18;UBERON:0004139,3.64e-10,18;UBERON:0004291,3.64e-10,18;UBERON:0001017,5.38e-09,73;UBERON:0001016,4.88e-08,75;UBERON:0004872,6.55e-08,33;UBERON:0001049,1.80e-07,52;UBERON:0005068,1.80e-07,52;UBERON:0006241,1.80e-07,52;UBERON:0007135,1.80e-07,52;UBERON:0000955,1.85e-07,47;UBERON:0006238,1.85e-07,47;UBERON:0000073,1.86e-07,54;UBERON:0004121,2.83e-07,95;UBERON:0000924,2.83e-07,95;UBERON:0006601,2.83e-07,95;UBERON:0002346,2.85e-07,64;UBERON:0003075,2.85e-07,64;UBERON:0007284,2.85e-07,64;UBERON:0002616,3.29e-07,46;UBERON:0010371,8.42e-07,73 | |||
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| ||
|short_description=p3@Myadm | |short_description=p3@Myadm | ||
}} | }} |
Latest revision as of 16:04, 26 September 2015
Short description: | p3@Myadm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Myadm_5end |
Coexpression cluster: | NA |
Association with transcript: | 223bp_to_ENSMUST00000164553, NM_001093764, uc009eup.1_5end |
EntrezGene: | Myadm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 6.47e-14 | 92 |
tube | 3.37e-13 | 114 |
anatomical conduit | 1.25e-12 | 122 |
cardiovascular system | 4.37e-12 | 23 |
circulatory system | 4.37e-12 | 23 |
primary circulatory organ | 3.64e-10 | 18 |
heart | 3.64e-10 | 18 |
primitive heart tube | 3.64e-10 | 18 |
primary heart field | 3.64e-10 | 18 |
anterior lateral plate mesoderm | 3.64e-10 | 18 |
heart tube | 3.64e-10 | 18 |
heart primordium | 3.64e-10 | 18 |
cardiac mesoderm | 3.64e-10 | 18 |
cardiogenic plate | 3.64e-10 | 18 |
heart rudiment | 3.64e-10 | 18 |
central nervous system | 5.38e-09 | 73 |
nervous system | 4.88e-08 | 75 |
splanchnic layer of lateral plate mesoderm | 6.55e-08 | 33 |
neural tube | 1.80e-07 | 52 |
neural rod | 1.80e-07 | 52 |
future spinal cord | 1.80e-07 | 52 |
neural keel | 1.80e-07 | 52 |
brain | 1.85e-07 | 47 |
future brain | 1.85e-07 | 47 |
regional part of nervous system | 1.86e-07 | 54 |
ectoderm-derived structure | 2.83e-07 | 95 |
ectoderm | 2.83e-07 | 95 |
presumptive ectoderm | 2.83e-07 | 95 |
neurectoderm | 2.85e-07 | 64 |
neural plate | 2.85e-07 | 64 |
presumptive neural plate | 2.85e-07 | 64 |
regional part of brain | 3.29e-07 | 46 |
ecto-epithelium | 8.42e-07 | 73 |