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FFCP PHASE1:Mm9::chr12:5382494..5382511,-: Difference between revisions

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(Created page with "{{FFCP |id=chr12:5382494..5382511,- |short_description=p1@Klhl29 |description=CAGE_peak_1_at_Klhl29_5end |association_with_transcript=-6bp_to_ENSMUST00000020958,ENSMUST000...")
 
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{{FFCP
{{FFCP
|id=chr12:5382494..5382511,-
|DHSsupport=NA
|short_description=p1@Klhl29
|DPIdataset=NA
|description=CAGE_peak_1_at_Klhl29_5end
|association_with_transcript=-6bp_to_ENSMUST00000020958,ENSMUST00000170609,NM_001164493,uc007myw.2_5end
|EntrezGene=208439
|EntrezGene=208439
|HGNC=
|HGNC=
|MCL_coexpression_id=1325
|TSSclassifier=NA
|UniProt=G3X8T6,F7AGI9,B7ZNG7
|UniProt=G3X8T6,F7AGI9,B7ZNG7
|association_with_transcript=-6bp_to_ENSMUST00000020958,ENSMUST00000170609,NM_001164493,uc007myw.2_5end
|cluster_id=chr12:5382494..5382511,-
|description=CAGE_peak_1_at_Klhl29_5end
|id=chr12:5382494..5382511,-
|ontology_enrichment_celltype=CL:0000221!2.33e-17!44;CL:0000133!2.33e-17!44;CL:0002319!7.28e-17!43;CL:0000540!3.69e-16!33;CL:0000047!3.69e-16!33;CL:0000031!3.69e-16!33;CL:0000404!3.69e-16!33;CL:0000055!2.97e-15!50;CL:0000393!3.35e-15!39;CL:0000211!3.35e-15!39;CL:0000117!2.64e-11!23;CL:0000337!2.64e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000221,9.68e-18,44;CL:0000133,9.68e-18,44;CL:0002319,3.10e-17,43;CL:0000540,1.64e-16,33;CL:0000047,1.64e-16,33;CL:0000031,1.64e-16,33;CL:0000404,1.64e-16,33;CL:0000393,1.57e-15,39;CL:0000211,1.57e-15,39;CL:0000117,1.53e-11,23;CL:0000337,1.53e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.04e-30!102;UBERON:0000924!1.04e-30!102;UBERON:0006601!1.04e-30!102;UBERON:0001017!3.33e-27!73;UBERON:0005743!3.33e-27!73;UBERON:0000073!3.88e-27!75;UBERON:0001016!3.88e-27!75;UBERON:0002346!1.18e-22!71;UBERON:0003075!1.18e-22!71;UBERON:0007284!1.18e-22!71;UBERON:0000033!1.10e-19!63;UBERON:0000955!1.23e-18!50;UBERON:0006238!1.23e-18!50;UBERON:0003056!1.50e-18!49;UBERON:0001049!2.27e-18!52;UBERON:0005068!2.27e-18!52;UBERON:0006241!2.27e-18!52;UBERON:0007135!2.27e-18!52;UBERON:0002616!4.82e-18!49;UBERON:0003080!6.48e-17!40;UBERON:0002780!1.16e-16!39;UBERON:0001890!1.16e-16!39;UBERON:0006240!1.16e-16!39;UBERON:0002020!1.91e-13!34;UBERON:0002791!2.45e-12!29;UBERON:0003528!2.45e-12!29;UBERON:0001893!2.45e-12!29;UBERON:0000153!1.12e-11!94;UBERON:0000468!1.15e-10!333;UBERON:0007811!4.21e-10!86;UBERON:0000956!3.53e-08!21;UBERON:0001869!3.53e-08!21;UBERON:0000203!3.53e-08!21;UBERON:0000922!6.73e-08!328
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.49e-31,95;UBERON:0000924,9.49e-31,95;UBERON:0006601,9.49e-31,95;UBERON:0001017,7.95e-28,73;UBERON:0001016,9.29e-28,75;UBERON:0010371,3.32e-24,73;UBERON:0002346,8.80e-23,64;UBERON:0003075,8.80e-23,64;UBERON:0007284,8.80e-23,64;UBERON:0000073,9.02e-20,54;UBERON:0003056,5.80e-19,49;UBERON:0001049,8.88e-19,52;UBERON:0005068,8.88e-19,52;UBERON:0006241,8.88e-19,52;UBERON:0007135,8.88e-19,52;UBERON:0000955,5.11e-18,47;UBERON:0006238,5.11e-18,47;UBERON:0002616,2.05e-17,46;UBERON:0003080,2.75e-17,40;UBERON:0002780,4.99e-17,39;UBERON:0001890,4.99e-17,39;UBERON:0006240,4.99e-17,39;UBERON:0002020,9.86e-14,34;UBERON:0010314,1.60e-13,92;UBERON:0003528,1.35e-12,29;UBERON:0002791,1.35e-12,29;UBERON:0001893,1.35e-12,29;UBERON:0000956,2.44e-08,21;UBERON:0001869,2.44e-08,21;UBERON:0000203,2.44e-08,21
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|short_description=p1@Klhl29
}}
}}

Latest revision as of 16:02, 26 September 2015

Short description:p1@Klhl29
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Klhl29_5end
Coexpression cluster:MCL_coexpression_mm9:1325
Association with transcript: -6bp_to_ENSMUST00000020958, ENSMUST00000170609, NM_001164493, uc007myw.2_5end
EntrezGene:Klhl29
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Klhl29

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C38.70
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D523.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.09
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D95.45
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D713.51
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C14.00
adrenal gland, neonate N25.CNhs11223.1377-27I38.29
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F124.75
cortex, adult.CNhs10473.12-14D510.60
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B210.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D46.63
eyeball, neonate N00.CNhs11207.633-15C612.04
eyeball, neonate N01.CNhs11140.1532-43E78.58
eyeball, neonate N02.CNhs11205.1551-44G814.24
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H27.38
forelimb, embryo E13.CNhs10589.384-1E27.04
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G17.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D56.27
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C67.61
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H29.93
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.03
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C78.28
pituitary gland, embryo E14.CNhs11037.398-44A512.86
pituitary gland, embryo E15.CNhs10592.427-16B98.33
pituitary gland, embryo E16.CNhs11036.449-43F68.74
pituitary gland, embryo E17.CNhs11039.1265-44F59.05
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H34.76
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F28.33
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G87.12
stomach, embryo E16.CNhs11022.459-17D45.40
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A96.45
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C53.77
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H26.66
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell9.68e-1844
neurectodermal cell9.68e-1844
neural cell3.10e-1743
neuron1.64e-1633
neuronal stem cell1.64e-1633
neuroblast1.64e-1633
electrically signaling cell1.64e-1633
electrically responsive cell1.57e-1539
electrically active cell1.57e-1539
CNS neuron (sensu Vertebrata)1.53e-1123
neuroblast (sensu Vertebrata)1.53e-1123

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure9.49e-3195
ectoderm9.49e-3195
presumptive ectoderm9.49e-3195
central nervous system7.95e-2873
nervous system9.29e-2875
ecto-epithelium3.32e-2473
neurectoderm8.80e-2364
neural plate8.80e-2364
presumptive neural plate8.80e-2364
regional part of nervous system9.02e-2054
pre-chordal neural plate5.80e-1949
neural tube8.88e-1952
neural rod8.88e-1952
future spinal cord8.88e-1952
neural keel8.88e-1952
brain5.11e-1847
future brain5.11e-1847
regional part of brain2.05e-1746
anterior neural tube2.75e-1740
regional part of forebrain4.99e-1739
forebrain4.99e-1739
future forebrain4.99e-1739
gray matter9.86e-1434
structure with developmental contribution from neural crest1.60e-1392
brain grey matter1.35e-1229
regional part of telencephalon1.35e-1229
telencephalon1.35e-1229
cerebral cortex2.44e-0821
cerebral hemisphere2.44e-0821
pallium2.44e-0821
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