FFCP PHASE1:Mm9::chr17:51952617..51952680,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20230 | |EntrezGene=20230 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q535 | |UniProt=E9Q535 | ||
|association_with_transcript=0bp_to_ENSMUST00000156416_5end | |association_with_transcript=0bp_to_ENSMUST00000156416_5end | ||
|cluster_id=chr17:51952617..51952680,- | |||
|description=CAGE_peak_3_at_Satb1_5end | |description=CAGE_peak_3_at_Satb1_5end | ||
|id=chr17:51952617..51952680,- | |id=chr17:51952617..51952680,- | ||
|ontology_enrichment_celltype=CL:0000540!1.69e-07!33;CL:0000047!1.69e-07!33;CL:0000031!1.69e-07!33;CL:0000404!1.69e-07!33 | |ontology_enrichment_celltype=CL:0000540!1.69e-07!33;CL:0000047!1.69e-07!33;CL:0000031!1.69e-07!33;CL:0000404!1.69e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.52e-07,33;CL:0000047,1.52e-07,33;CL:0000031,1.52e-07,33;CL:0000404,1.52e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.29e-19!102;UBERON:0000924!5.29e-19!102;UBERON:0006601!5.29e-19!102;UBERON:0002346!3.29e-18!71;UBERON:0003075!3.29e-18!71;UBERON:0007284!3.29e-18!71;UBERON:0000033!8.28e-18!63;UBERON:0003056!1.09e-15!49;UBERON:0001017!1.05e-14!73;UBERON:0005743!1.05e-14!73;UBERON:0000073!4.38e-14!75;UBERON:0001016!4.38e-14!75;UBERON:0001049!1.02e-12!52;UBERON:0005068!1.02e-12!52;UBERON:0006241!1.02e-12!52;UBERON:0007135!1.02e-12!52;UBERON:0000955!3.28e-12!50;UBERON:0006238!3.28e-12!50;UBERON:0002616!8.77e-12!49;UBERON:0003080!2.79e-11!40;UBERON:0002780!4.11e-11!39;UBERON:0001890!4.11e-11!39;UBERON:0006240!4.11e-11!39;UBERON:0002020!6.21e-10!34;UBERON:0000153!3.50e-09!94;UBERON:0007811!4.38e-09!86;UBERON:0002791!5.69e-09!29;UBERON:0003528!5.69e-09!29;UBERON:0001893!5.69e-09!29;UBERON:0000956!3.87e-08!21;UBERON:0001869!3.87e-08!21;UBERON:0000203!3.87e-08!21;UBERON:0000020!4.66e-07!12;UBERON:0001032!4.66e-07!12;UBERON:0004456!4.66e-07!12 | |ontology_enrichment_uberon=UBERON:0004121!5.29e-19!102;UBERON:0000924!5.29e-19!102;UBERON:0006601!5.29e-19!102;UBERON:0002346!3.29e-18!71;UBERON:0003075!3.29e-18!71;UBERON:0007284!3.29e-18!71;UBERON:0000033!8.28e-18!63;UBERON:0003056!1.09e-15!49;UBERON:0001017!1.05e-14!73;UBERON:0005743!1.05e-14!73;UBERON:0000073!4.38e-14!75;UBERON:0001016!4.38e-14!75;UBERON:0001049!1.02e-12!52;UBERON:0005068!1.02e-12!52;UBERON:0006241!1.02e-12!52;UBERON:0007135!1.02e-12!52;UBERON:0000955!3.28e-12!50;UBERON:0006238!3.28e-12!50;UBERON:0002616!8.77e-12!49;UBERON:0003080!2.79e-11!40;UBERON:0002780!4.11e-11!39;UBERON:0001890!4.11e-11!39;UBERON:0006240!4.11e-11!39;UBERON:0002020!6.21e-10!34;UBERON:0000153!3.50e-09!94;UBERON:0007811!4.38e-09!86;UBERON:0002791!5.69e-09!29;UBERON:0003528!5.69e-09!29;UBERON:0001893!5.69e-09!29;UBERON:0000956!3.87e-08!21;UBERON:0001869!3.87e-08!21;UBERON:0000203!3.87e-08!21;UBERON:0000020!4.66e-07!12;UBERON:0001032!4.66e-07!12;UBERON:0004456!4.66e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.50e-22,92;UBERON:0004121,2.13e-17,95;UBERON:0000924,2.13e-17,95;UBERON:0006601,2.13e-17,95;UBERON:0002346,5.03e-17,64;UBERON:0003075,5.03e-17,64;UBERON:0007284,5.03e-17,64;UBERON:0010371,1.23e-16,73;UBERON:0003056,1.14e-15,49;UBERON:0001017,1.86e-14,73;UBERON:0001016,7.66e-14,75;UBERON:0000073,1.02e-12,54;UBERON:0001049,1.44e-12,52;UBERON:0005068,1.44e-12,52;UBERON:0006241,1.44e-12,52;UBERON:0007135,1.44e-12,52;UBERON:0000955,1.17e-11,47;UBERON:0006238,1.17e-11,47;UBERON:0003080,3.06e-11,40;UBERON:0002616,3.13e-11,46;UBERON:0002780,4.53e-11,39;UBERON:0001890,4.53e-11,39;UBERON:0006240,4.53e-11,39;UBERON:0002020,6.99e-10,34;UBERON:0003528,6.54e-09,29;UBERON:0002791,6.54e-09,29;UBERON:0001893,6.54e-09,29;UBERON:0000956,4.63e-08,21;UBERON:0001869,4.63e-08,21;UBERON:0000203,4.63e-08,21;UBERON:0000020,4.22e-07,12;UBERON:0001032,4.22e-07,12;UBERON:0004456,4.22e-07,12 | |||
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| ||
|short_description=p3@Satb1 | |short_description=p3@Satb1 | ||
}} | }} |
Latest revision as of 15:53, 26 September 2015
Short description: | p3@Satb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Satb1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000156416_5end |
EntrezGene: | Satb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.52e-07 | 33 |
neuronal stem cell | 1.52e-07 | 33 |
neuroblast | 1.52e-07 | 33 |
electrically signaling cell | 1.52e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.50e-22 | 92 |
ectoderm-derived structure | 2.13e-17 | 95 |
ectoderm | 2.13e-17 | 95 |
presumptive ectoderm | 2.13e-17 | 95 |
neurectoderm | 5.03e-17 | 64 |
neural plate | 5.03e-17 | 64 |
presumptive neural plate | 5.03e-17 | 64 |
ecto-epithelium | 1.23e-16 | 73 |
pre-chordal neural plate | 1.14e-15 | 49 |
central nervous system | 1.86e-14 | 73 |
nervous system | 7.66e-14 | 75 |
regional part of nervous system | 1.02e-12 | 54 |
neural tube | 1.44e-12 | 52 |
neural rod | 1.44e-12 | 52 |
future spinal cord | 1.44e-12 | 52 |
neural keel | 1.44e-12 | 52 |
brain | 1.17e-11 | 47 |
future brain | 1.17e-11 | 47 |
anterior neural tube | 3.06e-11 | 40 |
regional part of brain | 3.13e-11 | 46 |
regional part of forebrain | 4.53e-11 | 39 |
forebrain | 4.53e-11 | 39 |
future forebrain | 4.53e-11 | 39 |
gray matter | 6.99e-10 | 34 |
brain grey matter | 6.54e-09 | 29 |
regional part of telencephalon | 6.54e-09 | 29 |
telencephalon | 6.54e-09 | 29 |
cerebral cortex | 4.63e-08 | 21 |
cerebral hemisphere | 4.63e-08 | 21 |
pallium | 4.63e-08 | 21 |
sense organ | 4.22e-07 | 12 |
sensory system | 4.22e-07 | 12 |
entire sense organ system | 4.22e-07 | 12 |