FFCP PHASE1:Mm9::chr7:31844925..31844939,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243914 | |EntrezGene=243914 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=112 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K1S1 | |UniProt=Q8K1S1 | ||
|association_with_transcript=-14bp_to_NM_144556,uc009ghz.1_5end | |association_with_transcript=-14bp_to_NM_144556,uc009ghz.1_5end | ||
|cluster_id=chr7:31844925..31844939,+ | |||
|description=CAGE_peak_11_at_Lgi4_5end | |description=CAGE_peak_11_at_Lgi4_5end | ||
|id=chr7:31844925..31844939,+ | |id=chr7:31844925..31844939,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.20e-11!43;CL:0000221!2.90e-11!44;CL:0000133!2.90e-11!44;CL:0000107!2.26e-10!9;CL:0000055!2.63e-09!50;CL:0000540!3.42e-08!33;CL:0000047!3.42e-08!33;CL:0000031!3.42e-08!33;CL:0000404!3.42e-08!33 | |ontology_enrichment_celltype=CL:0002319!1.20e-11!43;CL:0000221!2.90e-11!44;CL:0000133!2.90e-11!44;CL:0000107!2.26e-10!9;CL:0000055!2.63e-09!50;CL:0000540!3.42e-08!33;CL:0000047!3.42e-08!33;CL:0000031!3.42e-08!33;CL:0000404!3.42e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000217,2.42e-12,2;CL:0000328,2.42e-12,2;CL:0002573,2.42e-12,2;CL:0002376,2.42e-12,2;CL:0000218,2.42e-12,2;CL:0000692,2.42e-12,2;CL:0002377,2.42e-12,2;CL:0002375,2.42e-12,2;CL:0000878,4.02e-12,2;CL:0000129,4.02e-12,2;CL:0000333,8.44e-10,10;CL:0000095,8.44e-10,10;CL:0000243,8.44e-10,10;CL:0000123,8.44e-10,10;CL:0000125,8.44e-10,10;CL:0000030,8.44e-10,10;CL:0000339,8.44e-10,10;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0000215,1.13e-08,3;CL:0002610,1.34e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.21e-17!102;UBERON:0000924!5.21e-17!102;UBERON:0006601!5.21e-17!102;UBERON:0000073!1.25e-16!75;UBERON:0001016!1.25e-16!75;UBERON:0001017!2.13e-14!73;UBERON:0005743!2.13e-14!73;UBERON:0000010!8.55e-14!11;UBERON:0002410!2.26e-10!9;UBERON:0002298!9.14e-08!6;UBERON:0002346!1.95e-07!71;UBERON:0003075!1.95e-07!71;UBERON:0007284!1.95e-07!71;UBERON:0002005!9.33e-07!3;UBERON:0005428!9.33e-07!3 | |ontology_enrichment_uberon=UBERON:0004121!5.21e-17!102;UBERON:0000924!5.21e-17!102;UBERON:0006601!5.21e-17!102;UBERON:0000073!1.25e-16!75;UBERON:0001016!1.25e-16!75;UBERON:0001017!2.13e-14!73;UBERON:0005743!2.13e-14!73;UBERON:0000010!8.55e-14!11;UBERON:0002410!2.26e-10!9;UBERON:0002298!9.14e-08!6;UBERON:0002346!1.95e-07!71;UBERON:0003075!1.95e-07!71;UBERON:0007284!1.95e-07!71;UBERON:0002005!9.33e-07!3;UBERON:0005428!9.33e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.79e-09,11;UBERON:0004684,1.34e-08,3;UBERON:0002275,1.34e-08,3;UBERON:0000013,1.88e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49800055259202,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,2.20231761998777,0.127687338085188,0.46081959976873,0,0,0,0.279182999001381,0,0.916789486660861,0,0,0.186399445825301,0.454357159999104,4.91215140694106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0,0.252470927204373,0.631016438832513,0.390438744296638,0.861693590931196,0.477937595905104,0.445597348164788,0,0,0.584511715822624,1.18586333383957,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49800055259202,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,2.20231761998777,0.127687338085188,0.46081959976873,0,0,0,0.279182999001381,0,0.916789486660861,0,0,0.186399445825301,0.454357159999104,4.91215140694106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0,0.252470927204373,0.631016438832513,0.390438744296638,0.861693590931196,0.477937595905104,0.445597348164788,0,0,0.584511715822624,1.18586333383957,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p11@Lgi4 | |short_description=p11@Lgi4 | ||
}} | }} |
Latest revision as of 15:40, 26 September 2015
Short description: | p11@Lgi4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Lgi4_5end |
Coexpression cluster: | MCL_coexpression_mm9:112 |
Association with transcript: | -14bp_to_NM_144556, uc009ghz.1_5end |
EntrezGene: | Lgi4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 2.42e-12 | 2 |
myelin accumulating cell | 2.42e-12 | 2 |
Schwann cell | 2.42e-12 | 2 |
non-myelinating Schwann cell | 2.42e-12 | 2 |
myelinating Schwann cell;;Schwann cell | 2.42e-12 | 2 |
terminal Schwann cell | 2.42e-12 | 2 |
immature Schwann cell | 2.42e-12 | 2 |
Schwann cell precursor | 2.42e-12 | 2 |
central nervous system macrophage | 4.02e-12 | 2 |
microglial cell | 4.02e-12 | 2 |
migratory neural crest cell | 8.44e-10 | 10 |
neuron associated cell | 8.44e-10 | 10 |
glial cell (sensu Vertebrata) | 8.44e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 8.44e-10 | 10 |
glial cell | 8.44e-10 | 10 |
glioblast | 8.44e-10 | 10 |
glioblast (sensu Vertebrata) | 8.44e-10 | 10 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
barrier cell | 1.13e-08 | 3 |
raphe nuclei neuron | 1.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 5.79e-09 | 11 |
raphe nuclei | 1.34e-08 | 3 |
reticular formation | 1.34e-08 | 3 |
sympathetic nervous system | 1.88e-08 | 3 |