FFCP PHASE1:Mm9::chr12:47920175..47920191,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=664883 | |EntrezGene=664883 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JKN6 | |UniProt=Q9JKN6 | ||
|association_with_transcript=-413bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end | |association_with_transcript=-413bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end | ||
|cluster_id=chr12:47920175..47920191,- | |||
|description=CAGE_peak_1_at_Nova1_5end | |description=CAGE_peak_1_at_Nova1_5end | ||
|id=chr12:47920175..47920191,- | |id=chr12:47920175..47920191,- | ||
|ontology_enrichment_celltype=CL:0000540!9.94e-15!33;CL:0000047!9.94e-15!33;CL:0000031!9.94e-15!33;CL:0000404!9.94e-15!33;CL:0000117!8.11e-14!23;CL:0000337!8.11e-14!23;CL:0002319!8.41e-14!43;CL:0000221!2.43e-13!44;CL:0000133!2.43e-13!44;CL:0000393!1.75e-09!39;CL:0000211!1.75e-09!39;CL:0000055!8.49e-09!50 | |ontology_enrichment_celltype=CL:0000540!9.94e-15!33;CL:0000047!9.94e-15!33;CL:0000031!9.94e-15!33;CL:0000404!9.94e-15!33;CL:0000117!8.11e-14!23;CL:0000337!8.11e-14!23;CL:0002319!8.41e-14!43;CL:0000221!2.43e-13!44;CL:0000133!2.43e-13!44;CL:0000393!1.75e-09!39;CL:0000211!1.75e-09!39;CL:0000055!8.49e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.81e-16,33;CL:0000047,5.81e-16,33;CL:0000031,5.81e-16,33;CL:0000404,5.81e-16,33;CL:0000117,1.55e-15,23;CL:0000337,1.55e-15,23;CL:0002319,1.26e-14,43;CL:0000221,6.78e-14,44;CL:0000133,6.78e-14,44;CL:0000393,3.48e-11,39;CL:0000211,3.48e-11,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.43e-30!102;UBERON:0000924!2.43e-30!102;UBERON:0006601!2.43e-30!102;UBERON:0001017!4.62e-29!73;UBERON:0005743!4.62e-29!73;UBERON:0000073!7.34e-28!75;UBERON:0001016!7.34e-28!75;UBERON:0002346!1.11e-22!71;UBERON:0003075!1.11e-22!71;UBERON:0007284!1.11e-22!71;UBERON:0000033!8.25e-22!63;UBERON:0001049!2.59e-21!52;UBERON:0005068!2.59e-21!52;UBERON:0006241!2.59e-21!52;UBERON:0007135!2.59e-21!52;UBERON:0000955!1.38e-19!50;UBERON:0006238!1.38e-19!50;UBERON:0002616!4.71e-19!49;UBERON:0003056!1.39e-17!49;UBERON:0002020!4.77e-17!34;UBERON:0003080!5.36e-15!40;UBERON:0002780!2.26e-14!39;UBERON:0001890!2.26e-14!39;UBERON:0006240!2.26e-14!39;UBERON:0002791!1.39e-13!29;UBERON:0003528!1.39e-13!29;UBERON:0001893!1.39e-13!29;UBERON:0000153!3.89e-09!94;UBERON:0000956!7.47e-09!21;UBERON:0001869!7.47e-09!21;UBERON:0000203!7.47e-09!21;UBERON:0007811!1.39e-08!86;UBERON:0000468!2.30e-08!333;UBERON:0002619!3.71e-08!17;UBERON:0003076!4.10e-07!12;UBERON:0003057!4.10e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.95e-35,95;UBERON:0000924,2.95e-35,95;UBERON:0006601,2.95e-35,95;UBERON:0001017,2.66e-32,73;UBERON:0001016,1.62e-30,75;UBERON:0010371,3.31e-28,73;UBERON:0002346,5.54e-28,64;UBERON:0003075,5.54e-28,64;UBERON:0007284,5.54e-28,64;UBERON:0000073,1.29e-25,54;UBERON:0001049,4.33e-24,52;UBERON:0005068,4.33e-24,52;UBERON:0006241,4.33e-24,52;UBERON:0007135,4.33e-24,52;UBERON:0000955,6.99e-20,47;UBERON:0006238,6.99e-20,47;UBERON:0003056,7.85e-20,49;UBERON:0002616,2.74e-19,46;UBERON:0002020,3.20e-19,34;UBERON:0003080,7.00e-17,40;UBERON:0002780,3.61e-16,39;UBERON:0001890,3.61e-16,39;UBERON:0006240,3.61e-16,39;UBERON:0003528,2.87e-15,29;UBERON:0002791,2.87e-15,29;UBERON:0001893,2.87e-15,29;UBERON:0010314,3.21e-14,92;UBERON:0000956,7.07e-10,21;UBERON:0001869,7.07e-10,21;UBERON:0000203,7.07e-10,21;UBERON:0002619,4.39e-09,17;UBERON:0003076,6.76e-08,12;UBERON:0003057,6.76e-08,12;UBERON:0002021,3.92e-07,10;UBERON:0000411,3.92e-07,10;UBERON:0001950,3.92e-07,10;UBERON:0002420,7.47e-07,8;UBERON:0007245,7.47e-07,8;UBERON:0010009,7.47e-07,8;UBERON:0010011,7.47e-07,8;UBERON:0000454,7.47e-07,8 | |||
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| ||
|short_description=p1@Nova1 | |short_description=p1@Nova1 | ||
}} | }} |
Latest revision as of 15:25, 26 September 2015
Short description: | p1@Nova1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nova1_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -413bp_to_ENSMUST00000021438, NM_021361, uc007nmd.2, uc007nme.2_5end |
EntrezGene: | Nova1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.81e-16 | 33 |
neuronal stem cell | 5.81e-16 | 33 |
neuroblast | 5.81e-16 | 33 |
electrically signaling cell | 5.81e-16 | 33 |
CNS neuron (sensu Vertebrata) | 1.55e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.55e-15 | 23 |
neural cell | 1.26e-14 | 43 |
ectodermal cell | 6.78e-14 | 44 |
neurectodermal cell | 6.78e-14 | 44 |
electrically responsive cell | 3.48e-11 | 39 |
electrically active cell | 3.48e-11 | 39 |