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FFCP PHASE1:Mm9::chr12:47920175..47920191,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:47920175..47920191,-
|DHSsupport=NA
|short_description=p1@Nova1
|DPIdataset=NA
|description=CAGE_peak_1_at_Nova1_5end
|association_with_transcript=-413bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end
|EntrezGene=664883
|EntrezGene=664883
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q9JKN6
|UniProt=Q9JKN6
|association_with_transcript=-413bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end
|cluster_id=chr12:47920175..47920191,-
|description=CAGE_peak_1_at_Nova1_5end
|id=chr12:47920175..47920191,-
|ontology_enrichment_celltype=CL:0000540!9.94e-15!33;CL:0000047!9.94e-15!33;CL:0000031!9.94e-15!33;CL:0000404!9.94e-15!33;CL:0000117!8.11e-14!23;CL:0000337!8.11e-14!23;CL:0002319!8.41e-14!43;CL:0000221!2.43e-13!44;CL:0000133!2.43e-13!44;CL:0000393!1.75e-09!39;CL:0000211!1.75e-09!39;CL:0000055!8.49e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,5.81e-16,33;CL:0000047,5.81e-16,33;CL:0000031,5.81e-16,33;CL:0000404,5.81e-16,33;CL:0000117,1.55e-15,23;CL:0000337,1.55e-15,23;CL:0002319,1.26e-14,43;CL:0000221,6.78e-14,44;CL:0000133,6.78e-14,44;CL:0000393,3.48e-11,39;CL:0000211,3.48e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.43e-30!102;UBERON:0000924!2.43e-30!102;UBERON:0006601!2.43e-30!102;UBERON:0001017!4.62e-29!73;UBERON:0005743!4.62e-29!73;UBERON:0000073!7.34e-28!75;UBERON:0001016!7.34e-28!75;UBERON:0002346!1.11e-22!71;UBERON:0003075!1.11e-22!71;UBERON:0007284!1.11e-22!71;UBERON:0000033!8.25e-22!63;UBERON:0001049!2.59e-21!52;UBERON:0005068!2.59e-21!52;UBERON:0006241!2.59e-21!52;UBERON:0007135!2.59e-21!52;UBERON:0000955!1.38e-19!50;UBERON:0006238!1.38e-19!50;UBERON:0002616!4.71e-19!49;UBERON:0003056!1.39e-17!49;UBERON:0002020!4.77e-17!34;UBERON:0003080!5.36e-15!40;UBERON:0002780!2.26e-14!39;UBERON:0001890!2.26e-14!39;UBERON:0006240!2.26e-14!39;UBERON:0002791!1.39e-13!29;UBERON:0003528!1.39e-13!29;UBERON:0001893!1.39e-13!29;UBERON:0000153!3.89e-09!94;UBERON:0000956!7.47e-09!21;UBERON:0001869!7.47e-09!21;UBERON:0000203!7.47e-09!21;UBERON:0007811!1.39e-08!86;UBERON:0000468!2.30e-08!333;UBERON:0002619!3.71e-08!17;UBERON:0003076!4.10e-07!12;UBERON:0003057!4.10e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.95e-35,95;UBERON:0000924,2.95e-35,95;UBERON:0006601,2.95e-35,95;UBERON:0001017,2.66e-32,73;UBERON:0001016,1.62e-30,75;UBERON:0010371,3.31e-28,73;UBERON:0002346,5.54e-28,64;UBERON:0003075,5.54e-28,64;UBERON:0007284,5.54e-28,64;UBERON:0000073,1.29e-25,54;UBERON:0001049,4.33e-24,52;UBERON:0005068,4.33e-24,52;UBERON:0006241,4.33e-24,52;UBERON:0007135,4.33e-24,52;UBERON:0000955,6.99e-20,47;UBERON:0006238,6.99e-20,47;UBERON:0003056,7.85e-20,49;UBERON:0002616,2.74e-19,46;UBERON:0002020,3.20e-19,34;UBERON:0003080,7.00e-17,40;UBERON:0002780,3.61e-16,39;UBERON:0001890,3.61e-16,39;UBERON:0006240,3.61e-16,39;UBERON:0003528,2.87e-15,29;UBERON:0002791,2.87e-15,29;UBERON:0001893,2.87e-15,29;UBERON:0010314,3.21e-14,92;UBERON:0000956,7.07e-10,21;UBERON:0001869,7.07e-10,21;UBERON:0000203,7.07e-10,21;UBERON:0002619,4.39e-09,17;UBERON:0003076,6.76e-08,12;UBERON:0003057,6.76e-08,12;UBERON:0002021,3.92e-07,10;UBERON:0000411,3.92e-07,10;UBERON:0001950,3.92e-07,10;UBERON:0002420,7.47e-07,8;UBERON:0007245,7.47e-07,8;UBERON:0010009,7.47e-07,8;UBERON:0010011,7.47e-07,8;UBERON:0000454,7.47e-07,8
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|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,4.67738095830884,0.0992909512008853,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,1.56478268869608,1.09012578190223,1.97717564461025,1.36100929351998,1.25987779462826,5.75010257459886,0,0,0,0.257259436035947,0,0,73.6431917528936,73.5297461188126,86.2010708768404,1.0165335962074,0,0,0,0,6.5912024314049,6.91592949578798,3.52544681848824,3.51015439662396,2.52389953621658,56.2732439275493,39.0937317484356,12.0040983230655,8.05101956553185,22.9804696652505,25.3266526298594,33.8371445925747,35.1758961156798,56.9748762994437,50.8671298429398,57.8213841318004,29.314214895145,17.4456409109821,23.0725354142983,76.6034322231536,68.3384067835694,73.6277811009937,0.227178579999552,0.453429360640713,0.289864488701678,0,0,0,0.649776417447669,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,1.03575153458869,1.1875371125186,0.520455980298408,1.82679286987285,0.230615497256059,0.904335843315735,1.76383060703557,0.376999773989026,0,4.33798070759735,0.884610551949874,1.13236794963186,1.98757366614354,0.969750506270444,1.86391761218122,29.2780797011547,24.2958179903608,0.255457055208591,0,0,0,32.953940669061,16.0125210986519,15.3298309577695,16.6871347384585,8.95004100656157,24.5189892580281,15.5751612545047,3.05518091550949,1.8661045591514,0.758168275301024,3.99839526184301,2.47228841629137,3.44853156650209,5.76198815377118,7.53524089178575,10.0694018743965,7.81493693737584,5.528401749024,8.2785078636485,0.862271971731369,2.45837904218165,2.63926686245923,1.53437012699302,2.78047249225598,3.1342694986995,2.46938563689532,0.59710280045548,0,0,0,1.24275463521301,0.938104239924385,0.900310307305074,0.710234206755631,0.787056926989615,0.925602677324269,1.62773761325285,0.268273401399619,0,0.16455984991348,0.492502392237286,0.486412857275134,0.438599962275997,0.219550115291051,0.268412837520744,10.0939175310781,6.27718135513635,0,0.528901133327089,0.639864751605702,1.16118335930219,0.77320476793256,0.80673409849337,0.667134131534611,0.760902504450237,0.474529061544512,0.494096864172033,0.754005626400808,0.795825888164603,0.779856348476481,1.79763881730844,0.648414149624083,0.796565093017469,0.758671603812327,0.799739588268102,0,0.407302655690628,0.581857461502877,0.350679099451593,0.379419222745544,0.147610147979602,0.156998727841375,0.123397163921801,0,0.83422552858047,0.786235980452812,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,1.32643988239339,0.977789858652155,0.339490171550376,0.234690248288502,0.670025029767263,0.714130922658041,0.195133647857799,0.630540576424764,0.664394068946325,0.159454768657487,0.327726629431476,0.518054945597687,0.144649058581512,0,0,2.95058563811422,3.86311444826625,28.4174544278392,17.6989646754227,0.327869890753351,7.82659874333556,3.15508219416257,1.95219372148319,9.69405289797595,3.34556317133573,3.56477878531831,8.20921939287614,3.23848561339915,4.67609372658099,5.92931666919785,13.1741739732941,3.40656204499845,1.6025904330053,3.4206261464251,2.96946221350564,3.98235415019888,0.728341908464944,0.604647113929502,0.754420319023592,1.47650946440386,2.45948118355142,1.55056975900933,2.90826983582004,0.356497378384721,1.58018378967908,1.05418608574999,1.03135543248187,3.40439605753788,2.70091641046965,1.16422815404479,1.28602221018955,2.30542303734956,2.14042581122485,4.60737257685939,1.522324745573,0,0,1.54369878638473,21.2703266294509,9.04200789497071,3.73940134554566,2.02932984805332,2.29797259643086,0,43.7603712744803,0.170870880797853,1.44470807574256,0.555583582109135,0,0.27338845544205,0.228778173206523,0.169978429993855,0,0.138199973804424,0,2.05618395827738,1.01659733563424,0.648032044930808,0,0.655087691238533,0.809186078308924,1.1571483801547,0.523511883968059,1.29614973291793,1.24267862617385,1.69107881605257,0.897099276263873,0.330916980914195,1.75006069509643,1.29159823477731,0.675824501963113,1.05621514781179,1.17183946359555,0.943734099831398,2.65742532908607,1.44015003128933,0,0.202725215290164,0.308132871494482,0.25984164595559,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.233753804363138,6.80191150845634,0,0,0,0.19318959403219,3.19060208267009,5.67770035228522,2.35805216986972,2.00628841614145,14.6835479080437,15.1907328047368,16.0410743763031,16.497905504994,15.7568979547248,21.9064230243013,12.8254275044043,13.5096360967266,14.9536994964788,12.4262474820437,3.52876981786201,12.369771075432,10.9269507682646,7.05009479498053,10.0614318061432,9.00833191405069,4.66718128383392,6.79915688888351,5.45562656306086,7.58091635291392,8.61829619626815,6.03604292435444,7.39767909012071,7.61899313617944,6.94969174362921,9.0495801343784,6.2577536010222,5.98018583437486,6.1812885120496,5.88795680537589,6.51451579532289,5.32427418478012,6.91464950847231,6.1045494985578,7.43464105281112,5.24610568928394,4.93905526756486,4.47218509444333,4.34573164306758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|short_description=p1@Nova1
}}
}}

Latest revision as of 15:25, 26 September 2015

Short description:p1@Nova1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nova1_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -413bp_to_ENSMUST00000021438, NM_021361, uc007nmd.2, uc007nme.2_5end
EntrezGene:Nova1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nova1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C373.64
Mouse Granule cells, donor2.CNhs12357.11731-123E373.53
Mouse Granule cells, donor3.CNhs12108.11636-122C786.20
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F156.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.84
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D456.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F450.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D857.82
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E429.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D676.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F668.34
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E173.63
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B229.28
cerebellum, neonate N30.CNhs11135.1395-42I224.30
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A432.95
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F115.33
cortex, adult.CNhs10473.12-14D516.69
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F224.52
diencephalon, neonate N30.CNhs11201.1388-42B215.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C610.07
eyeball, neonate N01.CNhs11140.1532-43E77.81
eyeball, neonate N02.CNhs11205.1551-44G85.53
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C228.42
medulla oblongata, neonate N30.CNhs11200.1396-42A317.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.69
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C321.27
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H33.74
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C943.76
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I83.53
whole body, embryo E12.CNhs10587.857-27C912.37
whole body, embryo E13.CNhs10512.372-23H210.93
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B110.06
whole body, embryo E16.CNhs10514.453-14F29.01
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.11
whole body, embryo E17.5.CNhs10513.490-9F96.17
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.81e-1633
neuronal stem cell5.81e-1633
neuroblast5.81e-1633
electrically signaling cell5.81e-1633
CNS neuron (sensu Vertebrata)1.55e-1523
neuroblast (sensu Vertebrata)1.55e-1523
neural cell1.26e-1443
ectodermal cell6.78e-1444
neurectodermal cell6.78e-1444
electrically responsive cell3.48e-1139
electrically active cell3.48e-1139

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.95e-3595
ectoderm2.95e-3595
presumptive ectoderm2.95e-3595
central nervous system2.66e-3273
nervous system1.62e-3075
ecto-epithelium3.31e-2873
neurectoderm5.54e-2864
neural plate5.54e-2864
presumptive neural plate5.54e-2864
regional part of nervous system1.29e-2554
neural tube4.33e-2452
neural rod4.33e-2452
future spinal cord4.33e-2452
neural keel4.33e-2452
brain6.99e-2047
future brain6.99e-2047
pre-chordal neural plate7.85e-2049
regional part of brain2.74e-1946
gray matter3.20e-1934
anterior neural tube7.00e-1740
regional part of forebrain3.61e-1639
forebrain3.61e-1639
future forebrain3.61e-1639
brain grey matter2.87e-1529
regional part of telencephalon2.87e-1529
telencephalon2.87e-1529
structure with developmental contribution from neural crest3.21e-1492
cerebral cortex7.07e-1021
cerebral hemisphere7.07e-1021
pallium7.07e-1021
regional part of cerebral cortex4.39e-0917
posterior neural tube6.76e-0812
chordal neural plate6.76e-0812
occipital lobe3.92e-0710
visual cortex3.92e-0710
neocortex3.92e-0710
basal ganglion7.47e-078
nuclear complex of neuraxis7.47e-078
aggregate regional part of brain7.47e-078
collection of basal ganglia7.47e-078
cerebral subcortex7.47e-078
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