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FFCP PHASE1:Mm9::chr1:160292461..160292542,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:160292461..160292542,+
|DHSsupport=NA
|short_description=p1@Astn1
|DPIdataset=NA
|description=CAGE_peak_1_at_Astn1_5end
|association_with_transcript=0bp_to_ENSMUST00000046110,ENSMUST00000170718,uc007ddr.2,uc007dds.2,uc007ddt.2,uc007ddu.2_5end
|EntrezGene=11899
|EntrezGene=11899
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=G5E8A1,Q3TPU9,Q3UHD7,Q61137
|UniProt=G5E8A1,Q3TPU9,Q3UHD7,Q61137
|association_with_transcript=0bp_to_ENSMUST00000046110,ENSMUST00000170718,uc007ddr.2,uc007dds.2,uc007ddt.2,uc007ddu.2_5end
|cluster_id=chr1:160292461..160292542,+
|description=CAGE_peak_1_at_Astn1_5end
|id=chr1:160292461..160292542,+
|ontology_enrichment_celltype=CL:0000540!4.59e-19!33;CL:0000047!4.59e-19!33;CL:0000031!4.59e-19!33;CL:0000404!4.59e-19!33;CL:0002319!5.02e-18!43;CL:0000221!9.42e-18!44;CL:0000133!9.42e-18!44;CL:0000117!2.63e-15!23;CL:0000337!2.63e-15!23;CL:0000393!5.11e-13!39;CL:0000211!5.11e-13!39;CL:0000055!2.89e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000540,4.78e-21,33;CL:0000047,4.78e-21,33;CL:0000031,4.78e-21,33;CL:0000404,4.78e-21,33;CL:0002319,3.59e-19,43;CL:0000221,7.02e-19,44;CL:0000133,7.02e-19,44;CL:0000117,7.33e-17,23;CL:0000337,7.33e-17,23;CL:0000393,4.74e-15,39;CL:0000211,4.74e-15,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.49e-35!73;UBERON:0005743!2.49e-35!73;UBERON:0000073!3.35e-34!75;UBERON:0001016!3.35e-34!75;UBERON:0004121!9.01e-31!102;UBERON:0000924!9.01e-31!102;UBERON:0006601!9.01e-31!102;UBERON:0002346!1.69e-30!71;UBERON:0003075!1.69e-30!71;UBERON:0007284!1.69e-30!71;UBERON:0000033!3.56e-25!63;UBERON:0001049!1.16e-24!52;UBERON:0005068!1.16e-24!52;UBERON:0006241!1.16e-24!52;UBERON:0007135!1.16e-24!52;UBERON:0000955!1.88e-23!50;UBERON:0006238!1.88e-23!50;UBERON:0002616!1.10e-22!49;UBERON:0003056!1.33e-22!49;UBERON:0002020!7.31e-20!34;UBERON:0003080!3.74e-19!40;UBERON:0002780!1.51e-18!39;UBERON:0001890!1.51e-18!39;UBERON:0006240!1.51e-18!39;UBERON:0002791!1.14e-16!29;UBERON:0003528!1.14e-16!29;UBERON:0001893!1.14e-16!29;UBERON:0000153!5.96e-13!94;UBERON:0007811!5.07e-12!86;UBERON:0000956!5.61e-12!21;UBERON:0001869!5.61e-12!21;UBERON:0000203!5.61e-12!21;UBERON:0002619!1.37e-09!17;UBERON:0000468!1.68e-08!333;UBERON:0002021!3.94e-07!10;UBERON:0000411!3.94e-07!10;UBERON:0001950!3.94e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.59e-39,73;UBERON:0001016,4.16e-37,75;UBERON:0002346,3.82e-33,64;UBERON:0003075,3.82e-33,64;UBERON:0007284,3.82e-33,64;UBERON:0004121,7.75e-33,95;UBERON:0000924,7.75e-33,95;UBERON:0006601,7.75e-33,95;UBERON:0000073,7.50e-29,54;UBERON:0001049,2.77e-27,52;UBERON:0005068,2.77e-27,52;UBERON:0006241,2.77e-27,52;UBERON:0007135,2.77e-27,52;UBERON:0010371,1.51e-26,73;UBERON:0003056,5.47e-25,49;UBERON:0010314,9.80e-25,92;UBERON:0000955,7.18e-24,47;UBERON:0006238,7.18e-24,47;UBERON:0002616,4.97e-23,46;UBERON:0002020,6.18e-22,34;UBERON:0003080,3.81e-21,40;UBERON:0002780,1.80e-20,39;UBERON:0001890,1.80e-20,39;UBERON:0006240,1.80e-20,39;UBERON:0003528,2.21e-18,29;UBERON:0002791,2.21e-18,29;UBERON:0001893,2.21e-18,29;UBERON:0000956,3.73e-13,21;UBERON:0001869,3.73e-13,21;UBERON:0000203,3.73e-13,21;UBERON:0002619,1.70e-10,17;UBERON:0002021,9.17e-08,10;UBERON:0000411,9.17e-08,10;UBERON:0001950,9.17e-08,10
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07911256435163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,12.209408757305,2.85592037554813,1.94429899074283,4.61955191363696,8.62515386189829,0,0,0,0.257259436035947,0,0,69.7991789965612,80.935619828621,62.1154775436056,1.0165335962074,0,0,0.988866362566974,0,5.69240209984969,14.6002956022191,48.9414970096015,54.542399086003,44.3785668451416,39.9911378165325,37.3267834208227,47.5264300954022,48.2102719221729,56.0723459832113,42.9451935897616,45.2013176821564,49.9221233082791,78.3404549117352,69.3476338506265,72.4069585073896,26.8015679041326,47.8348218526928,44.6170883508286,82.4960039326269,63.3553979556008,62.0710154598251,0.151452386666368,0.755715601067855,0.579728977403356,0,0,0,0,0,1.40444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,1.1418387971906,8.80388804400384,6.67989625791711,7.80683970447611,8.8294988710521,5.5347719341454,6.78251882486802,5.29149182110672,1.38233250462643,0,0.289198713839823,0,0.323533699894818,0.662524555381181,0,0,14.9318206475889,14.8707161837553,0.510914110417183,0,0,0,47.0342607731143,34.7700458142156,43.0994427747125,57.0143770230667,47.5630750634415,48.2068263378179,41.533763345346,1.12023300235348,0.124406970610093,0.252722758433675,4.20883711772948,15.2240918266363,13.5642241615749,26.6491952111917,24.866294942893,35.6511255552958,36.7686377217519,34.9507432607789,13.9699820199068,6.68260778091811,13.9938499324186,13.1963343122962,4.3839146485515,2.78047249225598,0.696504333044333,0.61734640922383,3.78165106955137,0,0,0,5.17814431338755,5.8631514995274,2.16074473753218,0.946978942340841,2.36117078096885,1.23413690309903,0.697601834251224,0.804820204198858,0.700592054203017,0.822799249567402,2.13417703302824,1.70244500046297,0.584799949701329,0.878200461164203,1.07365135008297,45.2123389412874,57.7294875447786,0,0.528901133327089,5.54549451391608,5.80591679651096,4.76809606891745,2.8235693447268,2.44615848229357,0.951128130562796,0.474529061544512,3.29397909448022,2.01068167040216,1.98956472041151,0.58489226135736,0,1.51296634912286,0.796565093017469,2.27601481143698,4.34144347916969,1.1270773567308,2.03651327845314,0.775809948670503,1.40271639780637,1.3279672796094,0.147610147979602,0.470996183524124,0.246794327843601,0,1.66845105716094,1.37591296579242,0.449724224769707,0.202860121388503,0.482354319504834,0.25462585178142,0,0,0,2.87536413054709,0.744281895337007,0.936113019343682,0,0.179397413521912,0,0,4.54779388249163,1.14075483509418,1.01847051465113,0.704070744865506,0,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0,0,0,0,0,0.275936746304732,24.5642402681322,24.4972424977705,0,0,22.085575359138,24.5976408906882,37.483671205507,21.9851294116348,27.6270355862169,32.5538010407157,23.4790206971439,37.1164939547366,41.9005044623315,72.6186175113284,4.11626247103979,3.02711526234334,1.62886959353576,3.13443233647817,0,1.69946445308487,0,0.565815239267694,1.18120757152309,0.614870295887855,0.516856586336442,0.363533729477506,0,0.948110273807448,0,0,5.44703369206061,15.1251318986301,8.92574918101006,7.50179622610573,6.7389288784064,6.77801506887868,5.43011767986999,7.91608867697958,0,0,0.441056796109924,0,0,0.180938774784468,0,0,0.582961673259701,27.6283699995659,0.170870880797853,0.619160603889667,0,0,0,0,0,0,0,0,7.27572785236611,5.89626454667861,3.24016022465404,2.92723614420256,1.52853794622324,1.88810084938749,2.39695021603474,0.785267825952089,1.68499465279331,0,0,1.19613236835183,0.496375471371293,0.777804753376191,0.387479470433193,0.337912250981556,0.58678619322877,0,0.209718688851422,0.241584120826006,0,0.632022241256357,1.21635129174099,0.410843828659309,0,0.179026695667481,0.39736270956253,0,0.147689527174577,0.302899349844443,0.228620419965,0,0.38983152295901,0,0.116876902181569,0.226730383615211,0,0,0,1.35232715822533,0.750729901804728,0.183151624267265,0.214368379079066,0,58.7341916321749,53.3977274348325,61.8727154514548,59.6330542732596,40.4198686664679,45.323633843382,53.3267775183127,42.7805143063009,43.5016712624836,42.9741058754011,4.56664329370377,38.306387846499,17.2440941811676,14.8295097411659,8.80375283037526,7.90527086335061,12.2235700290888,12.7741735488114,12.8367683836726,10.6132828940795,9.88569269571935,13.7697229211836,10.8624148665064,11.9727034997106,13.0952869218798,11.4310485907938,11.8202012463753,9.64546102318525,14.0109206273124,13.8366984926333,9.25746981440622,11.3584515941976,12.1602456873134,10.61028841416,12.6106569756543,13.7921810863433,12.8049581010941,10.2597187460759,9.91370031074791,9.53941861818155,10.4398815949273,9.65343927280522,6.95692773388472,8.83139994760006,9.25951732709479,24.4814366379187,8.18760629558929,7.30561583764214,3.82576664137687,3.52946270591225,1.15933917810211
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07911256435163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,12.209408757305,2.85592037554813,1.94429899074283,4.61955191363696,8.62515386189829,0,0,0,0.257259436035947,0,0,69.7991789965612,80.935619828621,62.1154775436056,1.0165335962074,0,0,0.988866362566974,0,5.69240209984969,14.6002956022191,48.9414970096015,54.542399086003,44.3785668451416,39.9911378165325,37.3267834208227,47.5264300954022,48.2102719221729,56.0723459832113,42.9451935897616,45.2013176821564,49.9221233082791,78.3404549117352,69.3476338506265,72.4069585073896,26.8015679041326,47.8348218526928,44.6170883508286,82.4960039326269,63.3553979556008,62.0710154598251,0.151452386666368,0.755715601067855,0.579728977403356,0,0,0,0,0,1.40444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,1.1418387971906,8.80388804400384,6.67989625791711,7.80683970447611,8.8294988710521,5.5347719341454,6.78251882486802,5.29149182110672,1.38233250462643,0,0.289198713839823,0,0.323533699894818,0.662524555381181,0,0,14.9318206475889,14.8707161837553,0.510914110417183,0,0,0,47.0342607731143,34.7700458142156,43.0994427747125,57.0143770230667,47.5630750634415,48.2068263378179,41.533763345346,1.12023300235348,0.124406970610093,0.252722758433675,4.20883711772948,15.2240918266363,13.5642241615749,26.6491952111917,24.866294942893,35.6511255552958,36.7686377217519,34.9507432607789,13.9699820199068,6.68260778091811,13.9938499324186,13.1963343122962,4.3839146485515,2.78047249225598,0.696504333044333,0.61734640922383,3.78165106955137,0,0,0,5.17814431338755,5.8631514995274,2.16074473753218,0.946978942340841,2.36117078096885,1.23413690309903,0.697601834251224,0.804820204198858,0.700592054203017,0.822799249567402,2.13417703302824,1.70244500046297,0.584799949701329,0.878200461164203,1.07365135008297,45.2123389412874,57.7294875447786,0,0.528901133327089,5.54549451391608,5.80591679651096,4.76809606891745,2.8235693447268,2.44615848229357,0.951128130562796,0.474529061544512,3.29397909448022,2.01068167040216,1.98956472041151,0.58489226135736,0,1.51296634912286,0.796565093017469,2.27601481143698,4.34144347916969,1.1270773567308,2.03651327845314,0.775809948670503,1.40271639780637,1.3279672796094,0.147610147979602,0.470996183524124,0.246794327843601,0,1.66845105716094,1.37591296579242,0.449724224769707,0.202860121388503,0.482354319504834,0.25462585178142,0,0,0,2.87536413054709,0.744281895337007,0.936113019343682,0,0.179397413521912,0,0,4.54779388249163,1.14075483509418,1.01847051465113,0.704070744865506,0,0,0,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0,0,0,0,0,0.275936746304732,24.5642402681322,24.4972424977705,0,0,22.085575359138,24.5976408906882,37.483671205507,21.9851294116348,27.6270355862169,32.5538010407157,23.4790206971439,37.1164939547366,41.9005044623315,72.6186175113284,4.11626247103979,3.02711526234334,1.62886959353576,3.13443233647817,0,1.69946445308487,0,0.565815239267694,1.18120757152309,0.614870295887855,0.516856586336442,0.363533729477506,0,0.948110273807448,0,0,5.44703369206061,15.1251318986301,8.92574918101006,7.50179622610573,6.7389288784064,6.77801506887868,5.43011767986999,7.91608867697958,0,0,0.441056796109924,0,0,0.180938774784468,0,0,0.582961673259701,27.6283699995659,0.170870880797853,0.619160603889667,0,0,0,0,0,0,0,0,7.27572785236611,5.89626454667861,3.24016022465404,2.92723614420256,1.52853794622324,1.88810084938749,2.39695021603474,0.785267825952089,1.68499465279331,0,0,1.19613236835183,0.496375471371293,0.777804753376191,0.387479470433193,0.337912250981556,0.58678619322877,0,0.209718688851422,0.241584120826006,0,0.632022241256357,1.21635129174099,0.410843828659309,0,0.179026695667481,0.39736270956253,0,0.147689527174577,0.302899349844443,0.228620419965,0,0.38983152295901,0,0.116876902181569,0.226730383615211,0,0,0,1.35232715822533,0.750729901804728,0.183151624267265,0.214368379079066,0,58.7341916321749,53.3977274348325,61.8727154514548,59.6330542732596,40.4198686664679,45.323633843382,53.3267775183127,42.7805143063009,43.5016712624836,42.9741058754011,4.56664329370377,38.306387846499,17.2440941811676,14.8295097411659,8.80375283037526,7.90527086335061,12.2235700290888,12.7741735488114,12.8367683836726,10.6132828940795,9.88569269571935,13.7697229211836,10.8624148665064,11.9727034997106,13.0952869218798,11.4310485907938,11.8202012463753,9.64546102318525,14.0109206273124,13.8366984926333,9.25746981440622,11.3584515941976,12.1602456873134,10.61028841416,12.6106569756543,13.7921810863433,12.8049581010941,10.2597187460759,9.91370031074791,9.53941861818155,10.4398815949273,9.65343927280522,6.95692773388472,8.83139994760006,9.25951732709479,24.4814366379187,8.18760629558929,7.30561583764214,3.82576664137687,3.52946270591225,1.15933917810211
|short_description=p1@Astn1
}}
}}

Latest revision as of 15:17, 26 September 2015

Short description:p1@Astn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Astn1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000046110, ENSMUST00000170718, uc007ddr.2, uc007dds.2, uc007ddt.2, uc007ddu.2_5end
EntrezGene:Astn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Astn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.21
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C369.80
Mouse Granule cells, donor2.CNhs12357.11731-123E380.94
Mouse Granule cells, donor3.CNhs12108.11636-122C762.12
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D548.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F554.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D944.38
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F139.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D247.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F248.21
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D656.07
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F345.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D749.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D478.34
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F469.35
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D872.41
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E547.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I644.62
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D682.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F663.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E162.07
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H98.80
adrenal gland, adult.CNhs10508.49-24D76.68
adrenal gland, embryo E14.CNhs11038.406-44C57.81
adrenal gland, embryo E16.CNhs11004.1254-43D68.83
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F56.78
adrenal gland, neonate N00.CNhs11191.1311-23C15.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.93
cerebellum, neonate N30.CNhs11135.1395-42I214.87
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A447.03
corpus striatum, adult.CNhs10487.19-21D834.77
corpus striatum, neonate N00.CNhs11226.630-43F143.10
cortex, adult.CNhs10473.12-14D557.01
cortex, neonate N30.CNhs11107.1392-42F247.56
diencephalon, adult.CNhs10482.20-12F248.21
diencephalon, neonate N30.CNhs11201.1388-42B241.53
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C615.22
eyeball, embryo E14.CNhs10521.399-16E213.56
eyeball, embryo E15.CNhs10593.426-16C926.65
eyeball, embryo E17.CNhs11023.1261-18D424.87
eyeball, neonate N00.CNhs11207.633-15C635.65
eyeball, neonate N01.CNhs11140.1532-43E736.77
eyeball, neonate N02.CNhs11205.1551-44G834.95
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E26.68
forelimb, embryo E12.CNhs10600.359-14H213.99
forelimb, embryo E13.CNhs10589.384-1E213.20
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E845.21
hippocampus, neonate N00.CNhs11228.627-43G157.73
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F84.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C224.56
medulla oblongata, neonate N30.CNhs11200.1396-42A324.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E122.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.60
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E337.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D827.63
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D932.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D537.12
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D641.90
olfactory brain, adult.CNhs10489.18-22I972.62
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E615.13
pituitary gland, embryo E13.CNhs11009.370-44C78.93
pituitary gland, embryo E14.CNhs11037.398-44A57.50
pituitary gland, embryo E15.CNhs10592.427-16B96.74
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C927.63
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E37.28
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A158.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A253.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A361.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D759.63
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A440.42
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A545.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A653.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A742.78
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A942.97
whole body, embryo E11.CNhs11014.324-5I84.57
whole body, embryo E12.CNhs10587.857-27C938.31
whole body, embryo E13.CNhs10512.372-23H217.24
whole body, embryo E14.5.CNhs10578.420-27D214.83
whole body, embryo E14.CNhs10519.395-14B18.80
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.84
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.80
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.83
whole body, embryo E17.5.CNhs10513.490-9F99.26
whole body, embryo E17.CNhs10517.475-3I524.48
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron4.78e-2133
neuronal stem cell4.78e-2133
neuroblast4.78e-2133
electrically signaling cell4.78e-2133
neural cell3.59e-1943
ectodermal cell7.02e-1944
neurectodermal cell7.02e-1944
CNS neuron (sensu Vertebrata)7.33e-1723
neuroblast (sensu Vertebrata)7.33e-1723
electrically responsive cell4.74e-1539
electrically active cell4.74e-1539

Uber anatomy
Ontology termp-valuen
central nervous system3.59e-3973
nervous system4.16e-3775
neurectoderm3.82e-3364
neural plate3.82e-3364
presumptive neural plate3.82e-3364
ectoderm-derived structure7.75e-3395
ectoderm7.75e-3395
presumptive ectoderm7.75e-3395
regional part of nervous system7.50e-2954
neural tube2.77e-2752
neural rod2.77e-2752
future spinal cord2.77e-2752
neural keel2.77e-2752
ecto-epithelium1.51e-2673
pre-chordal neural plate5.47e-2549
structure with developmental contribution from neural crest9.80e-2592
brain7.18e-2447
future brain7.18e-2447
regional part of brain4.97e-2346
gray matter6.18e-2234
anterior neural tube3.81e-2140
regional part of forebrain1.80e-2039
forebrain1.80e-2039
future forebrain1.80e-2039
brain grey matter2.21e-1829
regional part of telencephalon2.21e-1829
telencephalon2.21e-1829
cerebral cortex3.73e-1321
cerebral hemisphere3.73e-1321
pallium3.73e-1321
regional part of cerebral cortex1.70e-1017
occipital lobe9.17e-0810
visual cortex9.17e-0810
neocortex9.17e-0810
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