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FFCP PHASE1:Mm9::chr1:159342658..159342696,-: Difference between revisions

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(Created page with "{{FFCP |id=chr1:159342658..159342696,- |short_description=p2@Rasal2 |description=CAGE_peak_2_at_Rasal2_5end |association_with_transcript=29bp_to_ENSMUST00000078308,ENSMUST...")
 
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{{FFCP
{{FFCP
|id=chr1:159342658..159342696,-
|DHSsupport=NA
|short_description=p2@Rasal2
|DPIdataset=NA
|description=CAGE_peak_2_at_Rasal2_5end
|association_with_transcript=29bp_to_ENSMUST00000078308,ENSMUST00000139470,ENSMUST00000143080,NM_177644,uc007ddg.2,uc007ddh.2_5end
|EntrezGene=226525
|EntrezGene=226525
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=E9PW37,E9PYD8,Q0VAV5,Q3TPW3
|UniProt=E9PW37,E9PYD8,Q0VAV5,Q3TPW3
|association_with_transcript=29bp_to_ENSMUST00000078308,ENSMUST00000139470,ENSMUST00000143080,NM_177644,uc007ddg.2,uc007ddh.2_5end
|cluster_id=chr1:159342658..159342696,-
|description=CAGE_peak_2_at_Rasal2_5end
|id=chr1:159342658..159342696,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.92e-17!63;UBERON:0000955!5.29e-16!50;UBERON:0006238!5.29e-16!50;UBERON:0002616!2.44e-15!49;UBERON:0003056!8.29e-15!49;UBERON:0000025!2.53e-14!114;UBERON:0001049!8.33e-14!52;UBERON:0005068!8.33e-14!52;UBERON:0006241!8.33e-14!52;UBERON:0007135!8.33e-14!52;UBERON:0004111!1.37e-13!122;UBERON:0003080!5.20e-13!40;UBERON:0002346!1.55e-12!71;UBERON:0003075!1.55e-12!71;UBERON:0007284!1.55e-12!71;UBERON:0002780!1.88e-12!39;UBERON:0001890!1.88e-12!39;UBERON:0006240!1.88e-12!39;UBERON:0004121!2.22e-12!102;UBERON:0000924!2.22e-12!102;UBERON:0006601!2.22e-12!102;UBERON:0001017!2.90e-12!73;UBERON:0005743!2.90e-12!73;UBERON:0000073!1.07e-11!75;UBERON:0001016!1.07e-11!75;UBERON:0002791!1.74e-11!29;UBERON:0003528!1.74e-11!29;UBERON:0001893!1.74e-11!29;UBERON:0002020!1.28e-10!34;UBERON:0000956!4.40e-09!21;UBERON:0001869!4.40e-09!21;UBERON:0000203!4.40e-09!21;UBERON:0002021!6.19e-08!10;UBERON:0000411!6.19e-08!10;UBERON:0001950!6.19e-08!10;UBERON:0002619!9.80e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.26e-17,92;UBERON:0003056,7.02e-15,49;UBERON:0000073,1.14e-14,54;UBERON:0000955,1.60e-14,47;UBERON:0006238,1.60e-14,47;UBERON:0000025,2.51e-14,114;UBERON:0002346,3.70e-14,64;UBERON:0003075,3.70e-14,64;UBERON:0007284,3.70e-14,64;UBERON:0010371,3.72e-14,73;UBERON:0002616,7.15e-14,46;UBERON:0001049,9.21e-14,52;UBERON:0005068,9.21e-14,52;UBERON:0006241,9.21e-14,52;UBERON:0007135,9.21e-14,52;UBERON:0004111,1.36e-13,122;UBERON:0004121,1.64e-13,95;UBERON:0000924,1.64e-13,95;UBERON:0006601,1.64e-13,95;UBERON:0003080,4.51e-13,40;UBERON:0002780,1.64e-12,39;UBERON:0001890,1.64e-12,39;UBERON:0006240,1.64e-12,39;UBERON:0001017,3.75e-12,73;UBERON:0001016,1.38e-11,75;UBERON:0003528,1.53e-11,29;UBERON:0002791,1.53e-11,29;UBERON:0001893,1.53e-11,29;UBERON:0002020,1.15e-10,34;UBERON:0000956,4.00e-09,21;UBERON:0001869,4.00e-09,21;UBERON:0000203,4.00e-09,21;UBERON:0002021,5.72e-08,10;UBERON:0000411,5.72e-08,10;UBERON:0001950,5.72e-08,10;UBERON:0002619,9.07e-08,17
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|phase1_expression=4.00372117761985,1.74487703819681,6.82498859084304,1.81478526784098,2.00358291978539,5.87577451691614,4.67225281191051,0,0.84473233291,0.468129052643987,0,0.159544317990673,0,0,0,0,0,0,0.137114433605739,1.27316895539409,8.92954546586233,0.397163804803541,0.261199789138935,1.91990907352088,2.52350209173887,5.7423196411502,3.87685796543167,4.95583835177545,0.380046838912748,1.51218077855958,1.33038306393183,1.90509202037889,0,0,1.73310971850765,0.831173226792462,1.83752420636132,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0,1.25896817975577,1.31790010585369,1.46837401729345,3.9119567217402,0.872100625521786,1.75748946187577,3.4997381833371,3.07970127575798,0,0,0,0,1.28629718017973,0,3.09403255366465,7.48570905180512,3.1739458756322,7.60597684207415,2.71075625655306,1.77858959222228,1.3498495759221,0.988866362566974,2.8419204597844,3.89480143673926,3.84218305321555,7.25827286159344,4.99521971827255,4.41682418837902,2.85650984403804,1.76694832761291,3.30725157880376,6.80502844229478,4.5960939330501,7.70811166995721,8.42736431362239,6.91229399653096,6.59431438650969,5.39777097254217,3.12548022334056,5.862842979029,7.87867654044352,11.0014738399303,6.18720029494702,4.6982654663704,2.42319279572891,2.42323818666189,1.96486056277642,28.4067198927644,14.6272059086836,0,2.69851595818909,1.29955283489534,0,3.23022166303029,4.26075806445144,1.03914401841148,2.47337702157238,2.53518155598025,2.56652954828636,0,0,1.29894624606728,2.78695852022608,1.51657333504435,2.96878087269556,0.258937883647172,4.30482203287992,2.08182392119363,1.52232739156071,2.53677046981664,1.80867168663147,3.29248379979973,2.01066546127481,3.46072954828123,4.33798070759735,1.76922110389975,3.558870698843,3.5334642953663,1.93950101254089,5.59175283654366,7.31951992528868,5.44561437714983,2.55457055208591,0.479260498023681,1.19980546198682,0.254140454146129,10.3355541189328,14.1825186873774,4.14659361972453,15.9918374576894,20.7129520437568,9.55825004973976,9.89671704713322,1.32391173005411,3.6078021476927,3.0326731012041,3.78795340595653,3.513251959993,5.0578462975364,2.88099407688559,4.82255417074288,7.0757959117381,6.02134485338794,7.02762934197966,6.72628763921441,3.01795190105979,3.59301552318857,2.81521798662318,2.41115305670332,2.22437799380478,3.83077383174383,3.08673204611915,5.7719937377363,0,0.257347907114715,0.568326998791185,5.38527008592305,3.75241695969754,5.40186184383045,5.44512891845984,7.67380503814875,5.24508183817086,9.53389173476672,9.65784245038629,7.82327793860036,9.87359099480883,8.20837320395476,9.48505071686512,9.5029991826466,5.04965265169416,8.99183005694491,14.7202963994889,5.35103984372279,0.660837565967596,2.11560453330835,2.77274725695804,1.85789337488351,2.06187938115349,1.4117846723634,3.33567065767305,2.09248188723815,1.89811624617805,0.988193728344065,3.77002813200404,2.38747766449381,3.31438948102504,1.79763881730844,1.29682829924817,1.7922714592893,1.70701110857774,4.11294645395024,3.38123207019241,6.51684249105006,3.10323979468201,3.99774173374816,4.48979413582227,5.46157547524528,2.511979645462,3.57851775373222,2.96452627087149,1.66845105716094,0.589676985339609,0.674586337154561,1.21716072833102,0.964708639009667,1.2731292589071,2.5892652370573,1.13494658742525,3.0201755450689,1.43768206527355,1.48856379067401,4.05648975048929,2.77836765741823,2.87035861635059,4.82443521363367,8.68339993783042,2.65287976478679,2.77040459951444,4.41337223015489,3.75504397261603,5.19269398069629,4.76087281772027,8.19561321002755,8.35466263762812,6.2010113101657,9.8861956567642,10.4872521418072,5.35323443784276,10.8486793936134,0,0,3.44234991113325,2.48343071674259,7.22477654945064,8.90808818100744,0.491804836130026,4.29200576247434,0.94652465824877,2.34263246577983,2.36965737506079,2.38968797952552,0.222798674082394,3.39691836946599,0.809621403349789,2.63030272120181,3.16230222357219,21.2072068838393,4.25820255624806,1.06839362200353,2.28041743095006,2.96946221350564,5.30980553359851,1.69946445308487,1.209294227859,0.754420319023592,1.18120757152309,3.3817866273832,3.35956781118687,3.99887102425256,2.85197902707777,3.79244109522979,1.05418608574999,3.09406629744561,11.5749465956288,4.68158844481407,1.4229455216103,3.00071849044229,4.25616560741457,4.28085162244969,5.43011767986999,2.74018454203139,2.58138878870081,1.69465656691056,1.32317038832977,2.80306630000516,5.00539722757307,4.58378229453985,3.9392873521035,3.93938159388147,3.20628920292836,8.34413859047294,0.854354403989263,3.50857675537478,2.22233432843654,0.941842285023455,1.6403307326523,1.14389086603261,0.679913719975421,0.419854356970974,0.552799895217695,0.954670618015114,3.32152793260192,3.25311147402958,2.26811215725783,1.46361807210128,2.18362563746178,1.61837215661785,3.14083131756277,2.87931536182433,1.8146096260851,1.86401793926078,6.76431526421028,4.03694674318743,3.64008679005615,4.66682852025714,2.58319646955462,2.87225413334323,2.34714477291508,4.4269490846943,5.03324853243412,5.79801889982414,7.20075015644664,0.316011120628178,1.01362607645082,1.1298205288131,1.16928740680016,0.537080087002444,1.19208812868759,0.721172697119813,0.443068581523732,0.403865799792591,0.609654453239999,0.907435666231565,1.16949456887703,0.962118416403295,1.05189211963412,3.62768613784338,0.887943813496259,0.448569283047378,0,4.056981474676,1.31377732815827,2.19781949120718,3.00115730710692,2.00628841614145,15.2482997506608,17.9526842237799,14.3223878359849,11.1704568523397,19.182310553578,20.3956352295219,16.2005400055633,13.0593148935024,22.6571204492102,23.8169743405837,3.52876981786201,6.78342284781753,4.95127456686989,4.37592090722929,1.67690530102386,3.30918315210025,6.00066165064361,3.29656091582231,4.49286893428541,3.53776096469316,2.78827229879264,3.9611531691076,4.30750934361459,5.12201219238954,3.84817642002609,4.28664322154766,5.44656331940821,2.70072908649187,3.70877310722976,3.82717192349433,4.80016953339582,3.37204031702741,5.00715998889374,3.48831399917588,3.76437521661322,4.48457421825885,3.84148743032822,3.94604567156764,4.20992752922171,2.80571135828869,4.50813068871862,4.43270170690036,2.86461730218783,3.56354734727722,3.2794123866794,5.49583271463481,3.97683734357194,2.57845264857958,3.63447830930802,3.52946270591225,3.47801753430632
|short_description=p2@Rasal2
}}
}}

Latest revision as of 15:13, 26 September 2015

Short description:p2@Rasal2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rasal2_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 29bp_to_ENSMUST00000078308, ENSMUST00000139470, ENSMUST00000143080, NM_177644, uc007ddg.2, uc007ddh.2_5end
EntrezGene:Rasal2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rasal2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D92.42
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D515.99
cortex, neonate N30.CNhs11107.1392-42F220.71
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B29.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C67.08
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I65.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E95.39
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C65.25
heart, embryo E17.CNhs11025.479-18E59.53
heart, embryo E18.CNhs11030.1283-20G39.66
heart, neonate N00.CNhs11213.639-21E37.82
heart, neonate N03.CNhs11221.1349-25I29.87
heart, neonate N10.CNhs11118.749-24G18.21
heart, neonate N16.CNhs11209.782-15G19.49
heart, neonate N20.CNhs11127.821-26I69.50
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D28.99
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F84.11
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I26.52
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G74.00
kidney, neonate N10.CNhs11206.758-6D54.49
kidney, neonate N20.CNhs11113.832-19I15.46
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B18.68
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C54.41
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C68.20
lung, neonate N06.CNhs11212.683-20E58.35
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E69.89
lung, neonate N20.CNhs11109.822-18A410.49
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H210.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I921.21
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H34.58
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A93.14
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D95.03
testis, neonate N20.CNhs11110.839-18H35.80
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.82
whole body, embryo E11.CNhs11014.324-5I83.53
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.26e-1792
pre-chordal neural plate7.02e-1549
regional part of nervous system1.14e-1454
brain1.60e-1447
future brain1.60e-1447
tube2.51e-14114
neurectoderm3.70e-1464
neural plate3.70e-1464
presumptive neural plate3.70e-1464
ecto-epithelium3.72e-1473
regional part of brain7.15e-1446
neural tube9.21e-1452
neural rod9.21e-1452
future spinal cord9.21e-1452
neural keel9.21e-1452
anatomical conduit1.36e-13122
ectoderm-derived structure1.64e-1395
ectoderm1.64e-1395
presumptive ectoderm1.64e-1395
anterior neural tube4.51e-1340
regional part of forebrain1.64e-1239
forebrain1.64e-1239
future forebrain1.64e-1239
central nervous system3.75e-1273
nervous system1.38e-1175
brain grey matter1.53e-1129
regional part of telencephalon1.53e-1129
telencephalon1.53e-1129
gray matter1.15e-1034
cerebral cortex4.00e-0921
cerebral hemisphere4.00e-0921
pallium4.00e-0921
occipital lobe5.72e-0810
visual cortex5.72e-0810
neocortex5.72e-0810
regional part of cerebral cortex9.07e-0817
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