FFCP PHASE1:Mm9::chr9:40183798..40183848,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235283 | |EntrezGene=235283 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=617 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=103bp_to_ENSMUST00000149492_5end | |association_with_transcript=103bp_to_ENSMUST00000149492_5end | ||
|cluster_id=chr9:40183798..40183848,- | |||
|description=CAGE_peak_12_at_Gramd1b_5end | |description=CAGE_peak_12_at_Gramd1b_5end | ||
|id=chr9:40183798..40183848,- | |id=chr9:40183798..40183848,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.46e-07,3;CL:0002614,7.48e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.03e-20!63;UBERON:0000073!1.37e-19!75;UBERON:0001016!1.37e-19!75;UBERON:0000955!1.84e-19!50;UBERON:0006238!1.84e-19!50;UBERON:0001017!9.13e-19!73;UBERON:0005743!9.13e-19!73;UBERON:0004121!1.09e-18!102;UBERON:0000924!1.09e-18!102;UBERON:0006601!1.09e-18!102;UBERON:0002616!1.37e-18!49;UBERON:0001049!1.37e-18!52;UBERON:0005068!1.37e-18!52;UBERON:0006241!1.37e-18!52;UBERON:0007135!1.37e-18!52;UBERON:0002346!8.15e-17!71;UBERON:0003075!8.15e-17!71;UBERON:0007284!8.15e-17!71;UBERON:0003056!1.28e-13!49;UBERON:0007811!3.04e-13!86;UBERON:0002020!1.40e-12!34;UBERON:0003080!2.74e-12!40;UBERON:0002021!1.32e-11!10;UBERON:0000411!1.32e-11!10;UBERON:0001950!1.32e-11!10;UBERON:0002780!1.69e-11!39;UBERON:0001890!1.69e-11!39;UBERON:0006240!1.69e-11!39;UBERON:0002619!3.66e-11!17;UBERON:0002791!5.11e-11!29;UBERON:0003528!5.11e-11!29;UBERON:0001893!5.11e-11!29;UBERON:0000153!6.70e-11!94;UBERON:0000956!1.11e-09!21;UBERON:0001869!1.11e-09!21;UBERON:0000203!1.11e-09!21;UBERON:0007023!1.87e-07!51;UBERON:0003076!2.15e-07!12;UBERON:0003057!2.15e-07!12;UBERON:0002298!6.92e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,5.79e-29,47;UBERON:0006238,5.79e-29,47;UBERON:0000073,6.68e-29,54;UBERON:0002616,2.96e-27,46;UBERON:0001049,1.34e-25,52;UBERON:0005068,1.34e-25,52;UBERON:0006241,1.34e-25,52;UBERON:0007135,1.34e-25,52;UBERON:0001017,6.05e-25,73;UBERON:0001016,4.28e-24,75;UBERON:0002346,9.55e-24,64;UBERON:0003075,9.55e-24,64;UBERON:0007284,9.55e-24,64;UBERON:0002021,2.24e-23,10;UBERON:0000411,2.24e-23,10;UBERON:0001950,2.24e-23,10;UBERON:0004121,7.08e-21,95;UBERON:0000924,7.08e-21,95;UBERON:0006601,7.08e-21,95;UBERON:0003528,5.11e-20,29;UBERON:0002791,5.11e-20,29;UBERON:0001893,5.11e-20,29;UBERON:0010371,5.16e-20,73;UBERON:0003080,2.64e-19,40;UBERON:0003056,7.13e-19,49;UBERON:0002619,1.58e-18,17;UBERON:0002780,9.51e-18,39;UBERON:0001890,9.51e-18,39;UBERON:0006240,9.51e-18,39;UBERON:0000956,2.95e-17,21;UBERON:0001869,2.95e-17,21;UBERON:0000203,2.95e-17,21;UBERON:0002020,1.79e-16,34;UBERON:0010314,1.55e-14,92;UBERON:0000025,3.65e-11,114;UBERON:0004111,5.97e-11,122;UBERON:0004733,2.59e-10,6;UBERON:0004732,2.59e-10,6;UBERON:0002028,2.59e-10,6;UBERON:0007277,2.59e-10,6;UBERON:0002950,6.66e-09,4;UBERON:0001891,6.66e-09,4;UBERON:0009616,6.66e-09,4;UBERON:0010286,6.66e-09,4;UBERON:0007023,1.15e-08,51;UBERON:0004684,1.46e-07,3;UBERON:0002275,1.46e-07,3;UBERON:0002038,7.48e-07,3;UBERON:0009663,7.48e-07,3;UBERON:0009661,7.48e-07,3;UBERON:0000125,7.48e-07,3;UBERON:0002308,7.48e-07,3;UBERON:0003076,7.69e-07,12;UBERON:0003057,7.69e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,1.1665793944457,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0,0.285650984403804,0.220868540951614,0,0,0,7.70811166995721,3.31987079021488,4.45458946443106,0,0.0914876436024097,0,3.90856198601933,1.12552522006336,2.44477196442896,0.883885756421003,0.142371680799103,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,39.2326267995473,46.0782754989601,0,0,0,0,5.39246301857362,3.20250421973039,0,11.8200537730748,7.16003280524926,5.61027720310812,4.2182728397617,0.305518091550949,1.11966273549084,5.30717792710717,45.8763245832513,0,0,0,0.150704817835715,0.272145996605311,0,0.562210347358373,14.7460921321239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3042074796422,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,7.54587772942622,5.50894926983355,0,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0.567760340833074,0.178065603667255,0.162886959353576,1.31976098378028,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.713475270408282,0.164549020602121,0,0,0,0.441056796109924,0.32977250588296,0,0,0,0,0,4.82105785227325,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,3.00943262421218,3.3885110557024,4.14292712856459,6.87474616127276,5.32744865265431,8.90607275701835,12.0863023582352,8.77529250301348,14.8605997063993,14.0474146785103,8.80192529978094,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0.499621155875892,0.233931608445408,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,1.1665793944457,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0,0.285650984403804,0.220868540951614,0,0,0,7.70811166995721,3.31987079021488,4.45458946443106,0,0.0914876436024097,0,3.90856198601933,1.12552522006336,2.44477196442896,0.883885756421003,0.142371680799103,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,39.2326267995473,46.0782754989601,0,0,0,0,5.39246301857362,3.20250421973039,0,11.8200537730748,7.16003280524926,5.61027720310812,4.2182728397617,0.305518091550949,1.11966273549084,5.30717792710717,45.8763245832513,0,0,0,0.150704817835715,0.272145996605311,0,0.562210347358373,14.7460921321239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3042074796422,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,7.54587772942622,5.50894926983355,0,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0.567760340833074,0.178065603667255,0.162886959353576,1.31976098378028,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.713475270408282,0.164549020602121,0,0,0,0.441056796109924,0.32977250588296,0,0,0,0,0,4.82105785227325,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,3.00943262421218,3.3885110557024,4.14292712856459,6.87474616127276,5.32744865265431,8.90607275701835,12.0863023582352,8.77529250301348,14.8605997063993,14.0474146785103,8.80192529978094,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0.499621155875892,0.233931608445408,0,0,0,0 | ||
|short_description=p12@Gramd1b | |short_description=p12@Gramd1b | ||
}} | }} |
Latest revision as of 15:10, 26 September 2015
Short description: | p12@Gramd1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Gramd1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:617 |
Association with transcript: | 103bp_to_ENSMUST00000149492_5end |
EntrezGene: | Gramd1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.46e-07 | 3 |
neuron of the substantia nigra | 7.48e-07 | 3 |