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FFCP PHASE1:Mm9::chr9:40153880..40153922,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:40153880..40153922,-
|DHSsupport=NA
|short_description=p8@Gramd1b
|DPIdataset=NA
|description=CAGE_peak_8_at_Gramd1b_5end
|association_with_transcript=-5bp_to_ENSMUST00000121357,uc009ozo.1_5end
|EntrezGene=235283
|EntrezGene=235283
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80TI0
|UniProt=Q80TI0
|association_with_transcript=-5bp_to_ENSMUST00000121357,uc009ozo.1_5end
|cluster_id=chr9:40153880..40153922,-
|description=CAGE_peak_8_at_Gramd1b_5end
|id=chr9:40153880..40153922,-
|ontology_enrichment_celltype=CL:0000117!7.88e-14!23;CL:0000337!7.88e-14!23;CL:0000540!6.43e-09!33;CL:0000047!6.43e-09!33;CL:0000031!6.43e-09!33;CL:0000404!6.43e-09!33;CL:0000221!1.43e-07!44;CL:0000133!1.43e-07!44;CL:0002319!2.28e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.55e-21,23;CL:0000337,2.55e-21,23;CL:0000540,1.58e-12,33;CL:0000047,1.58e-12,33;CL:0000031,1.58e-12,33;CL:0000404,1.58e-12,33;CL:0000393,1.67e-09,39;CL:0000211,1.67e-09,39;CL:0002319,7.32e-09,43;CL:0000221,1.68e-08,44;CL:0000133,1.68e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.82e-26!63;UBERON:0001049!2.19e-25!52;UBERON:0005068!2.19e-25!52;UBERON:0006241!2.19e-25!52;UBERON:0007135!2.19e-25!52;UBERON:0001017!9.29e-25!73;UBERON:0005743!9.29e-25!73;UBERON:0002346!1.33e-24!71;UBERON:0003075!1.33e-24!71;UBERON:0007284!1.33e-24!71;UBERON:0004121!1.59e-24!102;UBERON:0000924!1.59e-24!102;UBERON:0006601!1.59e-24!102;UBERON:0000955!3.67e-24!50;UBERON:0006238!3.67e-24!50;UBERON:0000073!1.07e-23!75;UBERON:0001016!1.07e-23!75;UBERON:0002616!2.29e-23!49;UBERON:0003056!3.74e-22!49;UBERON:0002020!5.74e-20!34;UBERON:0003080!1.59e-19!40;UBERON:0002780!7.55e-19!39;UBERON:0001890!7.55e-19!39;UBERON:0006240!7.55e-19!39;UBERON:0007811!8.38e-19!86;UBERON:0002791!6.62e-17!29;UBERON:0003528!6.62e-17!29;UBERON:0001893!6.62e-17!29;UBERON:0000153!1.48e-16!94;UBERON:0000956!3.60e-12!21;UBERON:0001869!3.60e-12!21;UBERON:0000203!3.60e-12!21;UBERON:0002619!4.58e-10!17;UBERON:0002021!7.96e-09!10;UBERON:0000411!7.96e-09!10;UBERON:0001950!7.96e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.89e-41,54;UBERON:0001049,5.22e-39,52;UBERON:0005068,5.22e-39,52;UBERON:0006241,5.22e-39,52;UBERON:0007135,5.22e-39,52;UBERON:0002346,8.99e-38,64;UBERON:0003075,8.99e-38,64;UBERON:0007284,8.99e-38,64;UBERON:0001017,2.30e-34,73;UBERON:0000955,4.60e-34,47;UBERON:0006238,4.60e-34,47;UBERON:0001016,5.74e-33,75;UBERON:0002616,8.23e-33,46;UBERON:0010371,2.91e-32,73;UBERON:0002020,6.31e-31,34;UBERON:0004121,2.63e-30,95;UBERON:0000924,2.63e-30,95;UBERON:0006601,2.63e-30,95;UBERON:0003056,2.87e-30,49;UBERON:0003080,5.36e-29,40;UBERON:0002780,6.47e-28,39;UBERON:0001890,6.47e-28,39;UBERON:0006240,6.47e-28,39;UBERON:0003528,5.54e-26,29;UBERON:0002791,5.54e-26,29;UBERON:0001893,5.54e-26,29;UBERON:0010314,4.85e-21,92;UBERON:0000956,2.38e-18,21;UBERON:0001869,2.38e-18,21;UBERON:0000203,2.38e-18,21;UBERON:0002619,5.83e-15,17;UBERON:0002021,2.95e-13,10;UBERON:0000411,2.95e-13,10;UBERON:0001950,2.95e-13,10;UBERON:0003076,5.83e-10,12;UBERON:0003057,5.83e-10,12;UBERON:0000025,1.25e-09,114;UBERON:0002420,1.08e-08,8;UBERON:0007245,1.08e-08,8;UBERON:0010009,1.08e-08,8;UBERON:0010011,1.08e-08,8;UBERON:0000454,1.08e-08,8;UBERON:0004111,3.90e-08,122;UBERON:0002240,7.14e-07,6;UBERON:0005174,7.14e-07,6;UBERON:0001137,7.14e-07,6
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.281577444303333,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,2.18025156380447,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0,0,5.66486090406874,6.87688273053643,6.33831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,3.83651565541367,2.97013064329719,3.57552434297349,3.42781181284564,4.63823935998388,3.91970557487853,4.60058260887535,5.51531271966013,3.30347642998166,5.87361755191863,5.68344173048101,3.69281605644543,6.86157327018072,5.73004707612436,3.62937898701795,3.37657566019008,3.0559649555362,7.36571463684169,6.12198227436143,6.33758115806022,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0.593768556259299,0.520455980298408,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.722996784599558,0,0.647067399789637,0.220841518460394,0,0,8.19786231632332,8.16842156572475,0,0.11981512450592,0,0.254140454146129,7.04016005202667,12.8100168789215,10.6806199295935,7.47444576826789,8.69432554923124,6.85700547046548,10.3834408363365,0.101839363850316,0.497627882440372,0.252722758433675,2.52530227063769,0.130120442962704,0.459804208866946,1.26043490863744,0.90422890701429,1.56483948048054,2.43416068541215,2.06143794031403,2.32833033665114,0,0,0.175951124163949,0,0,0.696504333044333,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0,0.146199987425332,0.219550115291051,0,7.57043814830858,5.55684906848136,0,0,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,1.47529281905711,0.551873492609465,4.49541651965817,3.28192722458169,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0,0,0.395287777946524,11.8888887076069,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,1.21390318077491,0,0.188605079755898,0,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,7.14923172082955,0,0.258717367565509,0.214337035031592,1.06404140185364,1.07021290561242,1.64549020602121,1.8267896946876,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,4.82105785227325,0,0,0,0.188368457004691,0,0,0.339956859987711,0,0.138199973804424,0,0.158167996790568,0.609958401380546,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0.316011120628178,0.810900861160657,0.513554785824136,0.129920822977795,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,13.5540442228096,10.5874804396651,15.4681788628637,7.73339320546594,9.59115527678899,10.5755145634558,12.1504050041725,13.9599572999508,12.2348450425735,13.4617681055473,0.103787347584177,0.399024873401031,0.512200817262403,2.43106717068294,1.46729213839588,1.2869045591501,1.11123363900808,0.824140228955577,0.320919209591815,1.76888048234658,1.2673964994512,0.943131706930381,1.12369808963859,1.98477972455095,2.46972516509137,0.952587382566147,1.62238056322798,1.54327376370964,1.23625770240992,2.06078488188156,1.02860775715625,1.95223386775271,1.43061713968393,2.90692833264657,1.78807822789128,1.69229215783353,1.09756783723664,0.789209134313529,1.22223702461276,3.92799590160417,1.89816028998679,1.67457620038458,0.818462086339379,1.70430525304563,1.15743966588685,3.99696924700713,1.87145286756327,0.644613162144895,0.191288332068843,0.441182838239031,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.281577444303333,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,2.18025156380447,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0,0,5.66486090406874,6.87688273053643,6.33831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,3.83651565541367,2.97013064329719,3.57552434297349,3.42781181284564,4.63823935998388,3.91970557487853,4.60058260887535,5.51531271966013,3.30347642998166,5.87361755191863,5.68344173048101,3.69281605644543,6.86157327018072,5.73004707612436,3.62937898701795,3.37657566019008,3.0559649555362,7.36571463684169,6.12198227436143,6.33758115806022,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0.593768556259299,0.520455980298408,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.722996784599558,0,0.647067399789637,0.220841518460394,0,0,8.19786231632332,8.16842156572475,0,0.11981512450592,0,0.254140454146129,7.04016005202667,12.8100168789215,10.6806199295935,7.47444576826789,8.69432554923124,6.85700547046548,10.3834408363365,0.101839363850316,0.497627882440372,0.252722758433675,2.52530227063769,0.130120442962704,0.459804208866946,1.26043490863744,0.90422890701429,1.56483948048054,2.43416068541215,2.06143794031403,2.32833033665114,0,0,0.175951124163949,0,0,0.696504333044333,0,0.59710280045548,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0,0.146199987425332,0.219550115291051,0,7.57043814830858,5.55684906848136,0,0,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.469380496577004,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,1.47529281905711,0.551873492609465,4.49541651965817,3.28192722458169,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0,0,0.395287777946524,11.8888887076069,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,1.21390318077491,0,0.188605079755898,0,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,7.14923172082955,0,0.258717367565509,0.214337035031592,1.06404140185364,1.07021290561242,1.64549020602121,1.8267896946876,0.23467170806371,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,4.82105785227325,0,0,0,0.188368457004691,0,0,0.339956859987711,0,0.138199973804424,0,0.158167996790568,0.609958401380546,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0.299033092087958,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0.316011120628178,0.810900861160657,0.513554785824136,0.129920822977795,0.358053391334963,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,13.5540442228096,10.5874804396651,15.4681788628637,7.73339320546594,9.59115527678899,10.5755145634558,12.1504050041725,13.9599572999508,12.2348450425735,13.4617681055473,0.103787347584177,0.399024873401031,0.512200817262403,2.43106717068294,1.46729213839588,1.2869045591501,1.11123363900808,0.824140228955577,0.320919209591815,1.76888048234658,1.2673964994512,0.943131706930381,1.12369808963859,1.98477972455095,2.46972516509137,0.952587382566147,1.62238056322798,1.54327376370964,1.23625770240992,2.06078488188156,1.02860775715625,1.95223386775271,1.43061713968393,2.90692833264657,1.78807822789128,1.69229215783353,1.09756783723664,0.789209134313529,1.22223702461276,3.92799590160417,1.89816028998679,1.67457620038458,0.818462086339379,1.70430525304563,1.15743966588685,3.99696924700713,1.87145286756327,0.644613162144895,0.191288332068843,0.441182838239031,0
|short_description=p8@Gramd1b
}}
}}

Latest revision as of 15:09, 26 September 2015

Short description:p8@Gramd1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Gramd1b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -5bp_to_ENSMUST00000121357, uc009ozo.1_5end
EntrezGene:Gramd1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Gramd1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.20
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F110.68
cortex, adult.CNhs10473.12-14D57.47
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.57
hippocampus, neonate N00.CNhs11228.627-43G15.56
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.55e-2123
neuroblast (sensu Vertebrata)2.55e-2123
neuron1.58e-1233
neuronal stem cell1.58e-1233
neuroblast1.58e-1233
electrically signaling cell1.58e-1233
electrically responsive cell1.67e-0939
electrically active cell1.67e-0939
neural cell7.32e-0943
ectodermal cell1.68e-0844
neurectodermal cell1.68e-0844

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.89e-4154
neural tube5.22e-3952
neural rod5.22e-3952
future spinal cord5.22e-3952
neural keel5.22e-3952
neurectoderm8.99e-3864
neural plate8.99e-3864
presumptive neural plate8.99e-3864
central nervous system2.30e-3473
brain4.60e-3447
future brain4.60e-3447
nervous system5.74e-3375
regional part of brain8.23e-3346
ecto-epithelium2.91e-3273
gray matter6.31e-3134
ectoderm-derived structure2.63e-3095
ectoderm2.63e-3095
presumptive ectoderm2.63e-3095
pre-chordal neural plate2.87e-3049
anterior neural tube5.36e-2940
regional part of forebrain6.47e-2839
forebrain6.47e-2839
future forebrain6.47e-2839
brain grey matter5.54e-2629
regional part of telencephalon5.54e-2629
telencephalon5.54e-2629
structure with developmental contribution from neural crest4.85e-2192
cerebral cortex2.38e-1821
cerebral hemisphere2.38e-1821
pallium2.38e-1821
regional part of cerebral cortex5.83e-1517
occipital lobe2.95e-1310
visual cortex2.95e-1310
neocortex2.95e-1310
posterior neural tube5.83e-1012
chordal neural plate5.83e-1012
tube1.25e-09114
basal ganglion1.08e-088
nuclear complex of neuraxis1.08e-088
aggregate regional part of brain1.08e-088
collection of basal ganglia1.08e-088
cerebral subcortex1.08e-088
anatomical conduit3.90e-08122
spinal cord7.14e-076
dorsal region element7.14e-076
dorsum7.14e-076
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