FFCP PHASE1:Mm9::chr12:45429869..45429941,+: Difference between revisions
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{{FFCP|EntrezGene=319504|HGNC=|MCL_coexpression_id=1|UniProt=Q810U4,Q6QRP1|association_with_transcript=0bp_to_ENSMUST00000020939,ENSMUST00000110748,ENSMUST00000110751,ENSMUST00000167410,NM_001146031,NM_176930,uc007nls.2,uc007nlt.2,uc007nlu.2,uc007nlv.2_5end|description=CAGE_peak_1_at_Nrcam_5end|id=chr12:45429869..45429941,+|ontology_enrichment_celltype=CL:0000221!4.66e-18!44;CL:0000133!4.66e-18!44;CL:0002319!1.44e-17!43;CL:0000540!5.30e-15!33;CL:0000047!5.30e-15!33;CL:0000031!5.30e-15!33;CL:0000404!5.30e-15!33;CL:0000055!1.01e-12!50;CL:0000117!2.44e-12!23;CL:0000337!2.44e-12!23;CL:0000393!7.33e-11!39;CL:0000211!7.33e-11!39|ontology_enrichment_celltype_v019_2=CL:0000221,3.07e-19,44;CL:0000133,3.07e-19,44;CL:0002319,1.03e-18,43;CL:0000540,5.79e-16,33;CL:0000047,5.79e-16,33;CL:0000031,5.79e-16,33;CL:0000404,5.79e-16,33;CL:0000117,4.14e-13,23;CL:0000337,4.14e-13,23;CL:0000393,7.99e-11,39;CL:0000211,7.99e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.49e-39!102;UBERON:0000924!4.49e-39!102;UBERON:0006601!4.49e-39!102;UBERON:0000073!1.44e-37!75;UBERON:0001016!1.44e-37!75;UBERON:0001017!6.61e-36!73;UBERON:0005743!6.61e-36!73;UBERON:0002346!5.53e-30!71;UBERON:0003075!5.53e-30!71;UBERON:0007284!5.53e-30!71;UBERON:0000033!2.88e-29!63;UBERON:0001049!4.19e-27!52;UBERON:0005068!4.19e-27!52;UBERON:0006241!4.19e-27!52;UBERON:0007135!4.19e-27!52;UBERON:0000955!2.25e-26!50;UBERON:0006238!2.25e-26!50;UBERON:0002616!1.14e-25!49;UBERON:0003056!6.48e-24!49;UBERON:0003080!3.59e-21!40;UBERON:0002780!1.51e-20!39;UBERON:0001890!1.51e-20!39;UBERON:0006240!1.51e-20!39;UBERON:0002020!1.82e-19!34;UBERON:0002791!6.74e-17!29;UBERON:0003528!6.74e-17!29;UBERON:0001893!6.74e-17!29;UBERON:0007811!7.81e-16!86;UBERON:0000153!8.28e-15!94;UBERON:0000956!1.26e-12!21;UBERON:0001869!1.26e-12!21;UBERON:0000203!1.26e-12!21;UBERON:0002619!1.09e-10!17;UBERON:0000468!9.17e-09!333;UBERON:0002021!3.15e-08!10;UBERON:0000411!3.15e-08!10;UBERON:0001950!3.15e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.69e-40,75;UBERON:0004121,5.96e-40,95;UBERON:0000924,5.96e-40,95;UBERON:0006601,5.96e-40,95;UBERON:0001017,2.23e-38,73;UBERON:0002346,2.11e-32,64;UBERON:0003075,2.11e-32,64;UBERON:0007284,2.11e-32,64;UBERON:0010371,5.42e-31,73;UBERON:0000073,1.89e-30,54;UBERON:0001049,6.14e-29,52;UBERON:0005068,6.14e-29,52;UBERON:0006241,6.14e-29,52;UBERON:0007135,6.14e-29,52;UBERON:0000955,5.18e-26,47;UBERON:0006238,5.18e-26,47;UBERON:0003056,1.61e-25,49;UBERON:0002616,2.87e-25,46;UBERON:0003080,1.41e-22,40;UBERON:0002780,6.58e-22,39;UBERON:0001890,6.58e-22,39;UBERON:0006240,6.58e-22,39;UBERON:0002020,9.51e-21,34;UBERON:0010314,9.65e-19,92;UBERON:0003528,5.37e-18,29;UBERON:0002791,5.37e-18,29;UBERON:0001893,5.37e-18,29;UBERON:0000956,2.04e-13,21;UBERON:0001869,2.04e-13,21;UBERON:0000203,2.04e-13,21;UBERON:0002619,2.41e-11,17;UBERON:0002021,1.05e-08,10;UBERON:0000411,1.05e-08,10;UBERON:0001950,1.05e-08,10;UBERON:0003076,8.04e-07,12;UBERON:0003057,8.04e-07,12|phase1_expression=23.8621782186143,0,0,0,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,19.9001298953503,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0.367093504323363,3.9119567217402,13.2995345392072,10.7646229539891,20.8039992009483,10.6389680435276,5.75010257459886,0,0,0,0.771778308107841,0.573066879877513,0.515672092277442,42.6887732413751,43.3772603003067,36.7622214033584,1.69422266034566,3.55717918444456,2.2497492932035,3.9554654502679,4.9733608046227,16.4780060785123,16.9056054341484,43.3422579449437,31.9964073846107,39.7514176954112,38.5628828945135,37.5476519617743,38.4621109534956,29.5204050736168,24.8189072384706,69.3730050296149,89.764198673887,77.4176927611467,51.9631973656964,54.6181232306386,50.007683573449,45.2276458382237,61.3411244934531,80.6774748261557,53.0331453852602,66.7723182947793,56.1062331934155,136.458600386398,175.552734128063,0,0,0,1.07940638327563,0,0,3.93244376368905,0,0,0,39.2953141176939,0,0,0,0.216491041011214,0,0,1.82694207550496,1.03575153458869,2.52351636410202,7.80683970447611,6.39377504455497,6.6878494204257,6.48107354376277,5.52666923537813,1.75933227861546,0.741584903203122,0.144599356919912,0.884610551949874,2.42650274921114,0.883366073841574,0.484875253135222,0,71.4385144708175,69.7457533688805,0,0,0,0,70.8509724384811,93.3301229749998,38.7015404507622,139.407104794206,146.269241592949,71.0635112393695,79.660460166269,2.44414473240759,0.746441823660558,0,7.99679052368601,4.16385417480652,15.4034409970427,20.3470206680045,26.0719334855787,35.7191620544471,36.3842965608973,29.6097449608743,27.1638539275966,0.646703978798527,1.13463648100692,1.58356011747554,1.31517439456545,2.22437799380478,2.78601733217733,1.64625709126355,0.398068533636986,0,0,0.284163499395593,0.621377317606506,0.469052119962192,0.180062061461015,0.710234206755631,0.393528463494808,0.462801338662135,0.465067889500816,0,0,0.493679549740441,0,0.24320642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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319504 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q810U4,Q6QRP1 | |||
|association_with_transcript=0bp_to_ENSMUST00000020939,ENSMUST00000110748,ENSMUST00000110751,ENSMUST00000167410,NM_001146031,NM_176930,uc007nls.2,uc007nlt.2,uc007nlu.2,uc007nlv.2_5end | |||
|cluster_id=chr12:45429869..45429941,+ | |||
|description=CAGE_peak_1_at_Nrcam_5end | |||
|id=chr12:45429869..45429941,+ | |||
|ontology_enrichment_celltype=CL:0000221!4.66e-18!44;CL:0000133!4.66e-18!44;CL:0002319!1.44e-17!43;CL:0000540!5.30e-15!33;CL:0000047!5.30e-15!33;CL:0000031!5.30e-15!33;CL:0000404!5.30e-15!33;CL:0000055!1.01e-12!50;CL:0000117!2.44e-12!23;CL:0000337!2.44e-12!23;CL:0000393!7.33e-11!39;CL:0000211!7.33e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.07e-19,44;CL:0000133,3.07e-19,44;CL:0002319,1.03e-18,43;CL:0000540,5.79e-16,33;CL:0000047,5.79e-16,33;CL:0000031,5.79e-16,33;CL:0000404,5.79e-16,33;CL:0000117,4.14e-13,23;CL:0000337,4.14e-13,23;CL:0000393,7.99e-11,39;CL:0000211,7.99e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.49e-39!102;UBERON:0000924!4.49e-39!102;UBERON:0006601!4.49e-39!102;UBERON:0000073!1.44e-37!75;UBERON:0001016!1.44e-37!75;UBERON:0001017!6.61e-36!73;UBERON:0005743!6.61e-36!73;UBERON:0002346!5.53e-30!71;UBERON:0003075!5.53e-30!71;UBERON:0007284!5.53e-30!71;UBERON:0000033!2.88e-29!63;UBERON:0001049!4.19e-27!52;UBERON:0005068!4.19e-27!52;UBERON:0006241!4.19e-27!52;UBERON:0007135!4.19e-27!52;UBERON:0000955!2.25e-26!50;UBERON:0006238!2.25e-26!50;UBERON:0002616!1.14e-25!49;UBERON:0003056!6.48e-24!49;UBERON:0003080!3.59e-21!40;UBERON:0002780!1.51e-20!39;UBERON:0001890!1.51e-20!39;UBERON:0006240!1.51e-20!39;UBERON:0002020!1.82e-19!34;UBERON:0002791!6.74e-17!29;UBERON:0003528!6.74e-17!29;UBERON:0001893!6.74e-17!29;UBERON:0007811!7.81e-16!86;UBERON:0000153!8.28e-15!94;UBERON:0000956!1.26e-12!21;UBERON:0001869!1.26e-12!21;UBERON:0000203!1.26e-12!21;UBERON:0002619!1.09e-10!17;UBERON:0000468!9.17e-09!333;UBERON:0002021!3.15e-08!10;UBERON:0000411!3.15e-08!10;UBERON:0001950!3.15e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.69e-40,75;UBERON:0004121,5.96e-40,95;UBERON:0000924,5.96e-40,95;UBERON:0006601,5.96e-40,95;UBERON:0001017,2.23e-38,73;UBERON:0002346,2.11e-32,64;UBERON:0003075,2.11e-32,64;UBERON:0007284,2.11e-32,64;UBERON:0010371,5.42e-31,73;UBERON:0000073,1.89e-30,54;UBERON:0001049,6.14e-29,52;UBERON:0005068,6.14e-29,52;UBERON:0006241,6.14e-29,52;UBERON:0007135,6.14e-29,52;UBERON:0000955,5.18e-26,47;UBERON:0006238,5.18e-26,47;UBERON:0003056,1.61e-25,49;UBERON:0002616,2.87e-25,46;UBERON:0003080,1.41e-22,40;UBERON:0002780,6.58e-22,39;UBERON:0001890,6.58e-22,39;UBERON:0006240,6.58e-22,39;UBERON:0002020,9.51e-21,34;UBERON:0010314,9.65e-19,92;UBERON:0003528,5.37e-18,29;UBERON:0002791,5.37e-18,29;UBERON:0001893,5.37e-18,29;UBERON:0000956,2.04e-13,21;UBERON:0001869,2.04e-13,21;UBERON:0000203,2.04e-13,21;UBERON:0002619,2.41e-11,17;UBERON:0002021,1.05e-08,10;UBERON:0000411,1.05e-08,10;UBERON:0001950,1.05e-08,10;UBERON:0003076,8.04e-07,12;UBERON:0003057,8.04e-07,12 | |||
|phase1_expression=23.8621782186143,0,0,0,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,19.9001298953503,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0.367093504323363,3.9119567217402,13.2995345392072,10.7646229539891,20.8039992009483,10.6389680435276,5.75010257459886,0,0,0,0.771778308107841,0.573066879877513,0.515672092277442,42.6887732413751,43.3772603003067,36.7622214033584,1.69422266034566,3.55717918444456,2.2497492932035,3.9554654502679,4.9733608046227,16.4780060785123,16.9056054341484,43.3422579449437,31.9964073846107,39.7514176954112,38.5628828945135,37.5476519617743,38.4621109534956,29.5204050736168,24.8189072384706,69.3730050296149,89.764198673887,77.4176927611467,51.9631973656964,54.6181232306386,50.007683573449,45.2276458382237,61.3411244934531,80.6774748261557,53.0331453852602,66.7723182947793,56.1062331934155,136.458600386398,175.552734128063,0,0,0,1.07940638327563,0,0,3.93244376368905,0,0,0,39.2953141176939,0,0,0,0.216491041011214,0,0,1.82694207550496,1.03575153458869,2.52351636410202,7.80683970447611,6.39377504455497,6.6878494204257,6.48107354376277,5.52666923537813,1.75933227861546,0.741584903203122,0.144599356919912,0.884610551949874,2.42650274921114,0.883366073841574,0.484875253135222,0,71.4385144708175,69.7457533688805,0,0,0,0,70.8509724384811,93.3301229749998,38.7015404507622,139.407104794206,146.269241592949,71.0635112393695,79.660460166269,2.44414473240759,0.746441823660558,0,7.99679052368601,4.16385417480652,15.4034409970427,20.3470206680045,26.0719334855787,35.7191620544471,36.3842965608973,29.6097449608743,27.1638539275966,0.646703978798527,1.13463648100692,1.58356011747554,1.31517439456545,2.22437799380478,2.78601733217733,1.64625709126355,0.398068533636986,0,0,0.284163499395593,0.621377317606506,0.469052119962192,0.180062061461015,0.710234206755631,0.393528463494808,0.462801338662135,0.465067889500816,0,0,0.493679549740441,0,0.243206428637567,0,0.439100230582101,0,143.417744920735,57.2149644828821,0,0,1.2797295032114,3.25131340604614,1.9330119198314,1.4117846723634,0.667134131534611,2.09248188723815,0.474529061544512,1.81168850196412,1.00534083520108,0.795825888164603,0.38992817423824,0,0.432276099749388,0.199141273254367,1.51734320762465,4.22719496655997,9.01661885384643,3.66572390121566,2.90928730751439,1.82353131714828,3.79419222745544,1.03327103585722,1.56998727841375,1.48076596706161,0,0.166845105716094,0.196558995113203,0,0,0,0.50925170356284,0.575392274901621,0,0.274561413188081,0,1.48856379067401,0,0,0,0,3.14080423283228,3.60033682363921,8.14824882210129,6.28056817368196,8.91822943496308,17.5881570313907,7.85544014923845,5.85400943573396,25.6945284893091,24.8040452406628,35.8773229479346,3.27726629431476,15.3689633860647,4.62876987460837,10.5553898757491,2.17562273527484,0.983528546038072,0.275936746304732,68.2340007448116,63.7631575061585,0,0.252470927204373,7.88770548540642,10.1514073517126,9.47862950024315,27.720380562496,45.0053321646436,57.1814592193441,14.9779959619711,16.3663280430335,23.3219788988449,128.849847885145,4.25820255624806,1.06839362200353,1.30309567482861,1.81467135269789,0,0.485561272309963,0.302323556964751,0.565815239267694,0.590603785761546,0.307435147943927,1.80899805217755,2.18120237686503,0.356497378384721,0,0,0,18.7241783164583,26.6490419166339,19.7918786187614,18.4329850127169,22.699549906211,14.6262430433698,15.1385098953951,14.9187825066154,6.33613611772018,4.2366414172764,1.54369878638473,5.7710188529518,2.09903754704677,2.89502039655148,5.13301079213487,4.43180429311665,0.582961673259701,65.0842810056889,0,1.44470807574256,0.370389054739423,0,0.136694227721025,0,0,0,0,0,2.68885594543965,1.82987520414164,2.05210147561422,1.25452977608681,2.18362563746178,1.34864346384821,1.1571483801547,0,0.388844919875379,0.621339313086926,0,0.299033092087958,0.496375471371293,1.75006069509643,1.16243841129958,1.35164900392623,0.821500670520278,0.781226309063701,3.8797957437513,2.41584120826006,2.59227005632079,0.316011120628178,1.82452693761148,2.36235201479103,1.55904987573354,0.895133478337407,1.39076948346885,1.20195449519969,0.295379054349154,0.807731599585181,0.533447646584999,0.604957110821043,0.779663045918019,0.962118416403295,0.233753804363138,1.36038230169127,0.443971906748129,0,0,0.579568782096571,0.93841237725591,0.183151624267265,0.214368379079066,0,175.073071211291,174.002939399713,171.868654031819,155.870836385725,167.845217343807,181.294535373528,145.129837549838,172.473020834876,171.287830596029,171.896423501604,4.35906859853542,17.9561193030464,13.1464876430683,10.6966955510049,7.96530017986333,9.37601893095072,10.8900896622791,11.3319281481392,15.0832028508153,12.1294661646623,11.1530891951705,10.3744487762342,11.3306224038558,13.3812568526177,13.0378514529242,13.3362233559261,13.0949288317687,11.1887347868949,11.9504911232959,15.8974833745149,14.057639347802,11.0034999818789,11.2065009275241,14.2439488299682,14.2105164427149,12.1845035364014,14.0854539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| |||
|short_description=p1@Nrcam | |||
}} |
Latest revision as of 15:09, 26 September 2015
Short description: | p1@Nrcam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nrcam_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000020939, ENSMUST00000110748, ENSMUST00000110751, ENSMUST00000167410, NM_001146031, NM_176930, uc007nls.2, uc007nlt.2, uc007nlu.2, uc007nlv.2_5end |
EntrezGene: | Nrcam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.07e-19 | 44 |
neurectodermal cell | 3.07e-19 | 44 |
neural cell | 1.03e-18 | 43 |
neuron | 5.79e-16 | 33 |
neuronal stem cell | 5.79e-16 | 33 |
neuroblast | 5.79e-16 | 33 |
electrically signaling cell | 5.79e-16 | 33 |
CNS neuron (sensu Vertebrata) | 4.14e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.14e-13 | 23 |
electrically responsive cell | 7.99e-11 | 39 |
electrically active cell | 7.99e-11 | 39 |